Geotrypetes seraphini (Gaboon caecilian): 117363342
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Entry
117363342 CDS
T09159
Symbol
ATG2B
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04136
Autophagy - other
gsh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117363342 (ATG2B)
04136 Autophagy - other
117363342 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117363342 (ATG2B)
03029 Mitochondrial biogenesis [BR:
gsh03029
]
117363342 (ATG2B)
Membrane trafficking [BR:
gsh04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
117363342 (ATG2B)
Mitochondrial biogenesis [BR:
gsh03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117363342 (ATG2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
117363342
NCBI-ProteinID:
XP_033806767
UniProt:
A0A6P8RMT3
LinkDB
All DBs
Position
7:169890936..170144067
Genome browser
AA seq
2075 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLTLDLYQGTGSLAQVPLDKWCLNEIL
ESADAPLEVTEGFIQTISLSIPWGSLLQDNCALEVKGLEMVFRPRPRPASGSEPMYWSSF
MATSMQLAKECLSQKLTDEQGEGSQPFEGLEKFAETIETVLRRVKVTFIDTVLRIEHVLE
NSKTGTALEIQIGRTVYCDETADECAGINVHQPTAFAHKIVELVGVSFFWDEFPASTKSS
PLCSTTQVETEPKLSPSWNPKLIYEPHPQFTRNVPEIAPSGPVQIGSLIGRLEFGLTLKQ
NEVIPGAKLDVNGHIDSLHLFLSPRQVHLLLDMLAVIAGPESSSRIALSNKDRKNRPMQQ
EDEYRIQMELKRCLRKESLSGRTSSEQSFYETETARTPSSREEEVFFSMADMDMSHSLSC
LPPLGDPPTVDLDLSLTSTYTNTPAGSPLSATVLQPTWGDFLDHRKSEDHPRGSSFIPSL
IHQPCLRRTSLPSRSISVDESRPELVFRLTVETMSVSVLHIDPLPPAETLVSHNPLTPLA
MEFFSRIEKNCPMTFSAADLVSIRIVFADACSHDHLRFMATGIKISHEQRQRSSSRCFST
DMAIGHMELLECLFPTDSNSIPPQYTELLTFERGADSNSSPCVQLHYKHTDNRGPQGSQG
RLSSVPQKAELEIRLSPVSCELDISIVDRLNSLLQAQKLTTVEMMASHLYTSYNKHISLH
KAFTEIFLEDSRTPVNCCVSVLVTAPLLNIATRFPIPDLRSDQERGPWFKKSLQKEILHL
KFLDVEFKTEFLGGSSPEQIKLELTFKELTGNMQEDKGDPSINFFKVSSGMDGDMLSSDN
FDWPRVVLRINPVAVHSILERMTTEEEEESDGHIQEDEEGGSHSLKDVCDLRRPEPSPFS
SRRVMFENEEMVMPGDAREMNEFQDKAISNSHYVLELMLPNVYLTLPSKRFYEKLYNRIS
NDLFLWEPTAPSPVETFENFSYGIGLSVASQLINTFSKENFSQFKSTNHYDDESGSEEET
LQFGTTTDPSYRSRRKKKLDFQNKNAQSCLSLLLSINHGLVSLFTDVKKDDGRMMEGKHG
EFWLEFSSGSLFSVTKYEGFENKHYICLQTGSLSLYHQGMVDGAVLLAEVQLPSMFHPHW
LEPTIYSSGEECGSAHSASDGVGMDSLSMLSIAVKIQSDNSESNIKEFLVAVGLRGATLQ
HRVLPSGLSWHEQISQFLNISDEPVLGYSPPASITTFHIHLWSCALDYRPLYLPTRSVLT
VETFSISSSVALDKSSSTLRIILDEVALYLSQKCNAVTVNLHRDYVRVMDMGLLELTITA
VKPGSDQKGPKPRFELHCSSDVIHIRTCSDSCAALMNLIQYIASYGDLHPPRRTEVKAGA
RKRRTKTDSSGRASSQGPLLAEAEQQILRDLMSDAMEESDSLQAVSPIKPQFNGILDEKS
QSQEPSCSDLFLFPDESGNASQDASPTYMSLPRHLVNDTMMDAPSESDDFCILYAPKTVI
SEREGEPMVKKLIEEAILIKENHFSLPVKKTDTSKAPLHLPIPIMRYVMKEISLVWHLYG
GKDFGTAPSGSPAKSYISPHSSPSHTPTRHGRDTICGGRGRNQDYLMEIKLSKVKFQHEV
YPQNISEYEFSLQEQPVSRQVFIVQDLEIRDRLASSQMNKFLHLYCSKEMPRKAHSNMLT
VKALHVRPESVQSPQECCLRVSLMPLRLNIDQDALFFLKDFFASLSTEVEIFLMPDPEVK
KSPSADVTCSLPRNLSSIKKSSSLISVGHSQSNQNGSTDFTDQVNGHAHDIHETRASFGD
QPVFFREFRFTSEVPIRLDYHGKHVSMDQGTLAGILIGLAQLSCSELKLKRLCYRHGLLG
VDKLFAYAVNEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVR
GFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGPSPIEAKRLKRYSHHHLA
HQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHENRGVTGAVGGVLRQIPPAVVKPL
IMATEATSNVLGGMRNQIRPDVRQEESQKWRLGED
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggccgttctcggagtcgatcaagaagagggcttgcaggtacctgctgcagagg
tatctgggccacttcctgcaggagaagctgagcctggagcagctcaccctggacctctac
caaggcacgggctccctggcacaggttcccttggacaaatggtgtcttaatgagatcctg
gaatctgcagatgctccactagaggttactgaagggtttattcaaacaatctctctatct
attccctggggttcgctgctgcaggataactgtgcactagaagtaaaagggctagagatg
gtcttcagaccaagaccccgtccagcatctggatctgagccaatgtattggtcaagtttt
atggccactagtatgcaacttgcaaaagagtgtcttagtcaaaaactgacagatgaacag
ggagaaggatctcaaccatttgaaggacttgagaaatttgcagaaaccattgaaacagtt
ctaagaagagtcaaagtaacttttatagatactgttttgagaatagaacatgtgctagaa
aattctaaaactggaacagcgcttgaaattcaaatcggcagaaccgtgtactgtgatgaa
actgcagatgaatgtgctggaattaatgtgcatcaacccacagcttttgctcataaaata
gtagaacttgttggagtctctttcttctgggatgaatttccagcctccacaaaatcttcc
ccactgtgctccacaacacaagtggagactgaaccaaagctttctcccagctggaatcca
aaacttatatatgaacctcacccccagttcacgagaaatgtaccagaaattgcaccatct
ggcccagtgcagataggaagcttgattggcagactggagtttggcctaacactaaagcag
aatgaagtcattcctggagccaagcttgatgtaaatgggcatatagattctcttcatctt
ttcctgtcaccgcgacaggtgcatctgctgttggatatgttagcagttattgctggacca
gagagctccagcaggatagctttgtcaaataaagacagaaagaaccgacctatgcagcag
gaggatgaatatcgaattcagatggagctgaaacgttgcttgagaaaagagtctttgtct
gggagaacatcatctgagcagagtttctatgaaacggagactgcaagaacaccctctagc
cgtgaagaagaggtcttcttttcaatggcagatatggacatgtctcatagtctttcatgc
cttcctccccttggagaccctcccaccgtggacttggatctgtctttaactagtacatac
accaacactccagcgggatcccctctcagtgctactgtgttacagccaacctggggtgat
ttcttagatcatcgtaaatcagaggaccatccaagagggtcttcatttatacctagctta
attcatcaaccatgtttacgtcgaacctcactcccttcccgctccatttcagtggatgaa
tccaggccagaacttgtttttaggctgacggtggagacaatgtctgtgtcagtgctccat
attgatcctctgccaccagctgaaacgttagtgagccataaccccctcactccactagca
atggagttcttcagtcggatagaaaaaaattgtccgatgactttttcagcagccgatttg
gtgtccatccgcatagtgtttgcagatgcctgttctcatgatcatctcaggtttatggct
actggcatcaaaatttctcatgaacaaaggcaaaggtcaagttctcgatgttttagcaca
gacatggcgattggacatatggagctcttggaatgccttttccccactgattctaattct
attcctcctcaatacacagagcttctaacatttgaaaggggagctgattctaattcctct
ccttgtgttcaacttcattataagcatacagataatcgaggacctcagggcagccagggg
aggttaagctctgttccccagaaagcagaattagagatccggttaagtcctgtgtcttgt
gaactggatattagtattgtggataggcttaattccttgcttcaggcacagaagctaacc
actgtagagatgatggcatctcatctgtacacttcttataacaaacatattagcttgcac
aaggccttcacggaaatttttctggaggattcccgtacacctgtaaactgttgtgtttca
gtgctggtcactgcacctctgttaaatattgcaactcgctttccaatccctgatctgaga
tcggaccaggaacggggcccctggttcaagaaatcactacagaaagagattcttcatctg
aagttcttggatgtggaatttaagactgaattcttaggtggttcatctccagaacaaatt
aaattagagcttacctttaaagagctgactggaaacatgcaagaagacaagggagatcct
tctatcaacttttttaaggtgtccagtggcatggatggtgatatgttatcatctgacaat
tttgattggccaagggttgtgctgagaattaacccagttgctgtgcactccatcttggag
agaatgaccactgaggaggaagaagaaagtgatggccatatccaggaggatgaggaagga
ggatctcactctttgaaagatgtctgtgacctaaggcgacctgagccctctcctttttcc
tctcgcagagttatgtttgaaaatgaagagatggtgatgccaggagatgccagggaaatg
aatgagtttcaggataaagcaatcagcaactcccattatgtcctggaacttatgctgccg
aatgtttacctgacactgccaagcaaaagattttatgagaaactatataacagaattagc
aatgatttatttctctgggaacccactgctccatcccctgttgaaacatttgaaaatttc
tcctatggcatcggactctctgtggccagtcaactaattaacactttcagcaaagaaaat
ttcagtcagttcaagtcgacaaatcactatgatgatgaaagtggttctgaagaagaaaca
ttacagtttggtaccaccacggatccaagttatcggtctcgcaggaagaaaaagttggat
tttcagaacaagaatgctcaaagctgtctttctcttcttctcagcattaatcatgggctg
gtgtccttatttacagatgtgaagaaggatgatgggagaatgatggaaggcaaacatggt
gaattctggttggagttcagcagtggttcattattcagtgtgaccaaatatgagggtttt
gaaaacaagcactacatttgtctgcagacaggcagcctcagtctttaccatcaaggcatg
gtggatggagctgtcctactagctgaggtccaactgcccagcatgtttcatccacattgg
ttggagcctactatttattcctctggggaagagtgcggcagtgcacacagtgcctctgat
ggagttggtatggacagcttaagcatgctgtctattgcagtgaaaatccaatccgataac
tctgagagcaacataaaggaatttttggttgcagtgggcttaagaggagcaacccttcag
catagagtgctgccttcaggactaagctggcatgagcagatttcacagtttttgaatatt
tctgatgaaccagttttgggatatagtcccccggcctcaattacaacctttcacattcat
ctctggagttgtgcacttgactacaggcctctatatttgccaaccaggtctgttcttact
gtggaaacgttcagtatttccagcagtgttgctctggataaatcctcttccactctccga
atcatcttggatgaagtggctttgtatttgtctcagaagtgcaatgcagtgacagtgaac
ttgcatagagactatgttcgtgttatggacatgggactattggagttaaccataacagca
gtaaaacccggctctgatcaaaaagggcctaaaccccgctttgagttgcattgctccagt
gatgtaatccacatcagaacatgctcagactcctgtgctgcattaatgaatcttatccaa
tatattgccagttatggcgacctgcatcctcccagaaggacagaagttaaagctggagcc
cgcaaacggcgaacaaagactgattcttctggtagagcctcatctcagggtcctcttctg
gctgaggctgagcagcagattttgcgagatctaatgagcgatgccatggaagaaagtgat
tctcttcaagcagtctctcccataaaaccacagttcaatgggattttggatgaaaaatct
cagtctcaggaaccttcctgctctgatctattcctgtttccagatgaaagtgggaatgcc
tcccaagatgcaagtcccacttatatgtcccttcctcgtcacctagttaatgatactatg
atggatgcgccctctgaaagtgacgatttttgcattctttatgcacctaaaacagtcata
tccgagagagaaggggagcccatggtgaaaaagctgatagaagaagctatccttattaag
gagaatcatttcagcctgcccgttaaaaagacagacacaagcaaagcccctttacatctt
cccatccccatcatgcgatatgttatgaaggaaatatctcttgtttggcatctttatgga
gggaaggattttggaactgctccctccggttctccagctaaaagttatattagtcctcat
agttctccttctcatacgccaacaagacatggacgggatacaatatgtgggggtagagga
aggaaccaagactatttaatggaaataaaactaagtaaggtgaagtttcaacatgaagtt
tatccccagaatatatcggaatatgaatttagtttgcaggagcagccagtatcacgtcaa
gtttttattgttcaggacttagaaatcagagatcgcttagcttcatcacagatgaataaa
tttctccatctctattgcagtaaagagatgcccaggaaagcacattccaacatgttgaca
gtgaaagccttacatgtgcgtccagagtctgtccagtctcctcaggaatgctgtttacga
gtgtctctgatgcccttacgtctcaatattgaccaggatgccttatttttcctgaaagat
ttctttgctagtctttctacagaagtagaaatctttttgatgccagatccagaagtgaaa
aagtctccgtctgcagatgtcacttgcagcttgcctagaaacctcagcagcatcaagaag
tcaagttcacttatttctgtaggacacagccagtcaaaccagaacggcagcactgatttc
acagatcaagttaatggacatgcgcacgacatccatgagacaagggcatcatttggtgat
cagccagtattttttagggaatttcggtttacttcagaagttccaattcgtcttgattac
catggcaaacatgtatcaatggatcagggtacattagctgggattctgattggccttgct
cagttaagttgctcagagctgaagctgaagaggctttgttatcgacatggtttgttgggt
gtggataaattgtttgcatatgctgtcaacgaatggcttaatgacattaaaaaaaatcag
ctgccaggaatcctgggaggtgtcgggccgatgcattccttagttcagttagttcaaggt
cttaaggatttggtgtggttaccaatagagcaatatcgaaaagatggtcgcatcgtgcga
ggatttcagagaggagcagcttcgtttggcacctctactgcaatggcagctttggaactg
acaaacagaatggttcaaactattcaggcagcagcagagactgcttatgacatggtgtct
cctggtcccagtcctattgaggcaaaaaggctgaaaagatattctcatcaccatctagcg
catcagccagtagacctaagagagggtgttgccaaagcatatagtgtcgtcaaagagggg
attactgacaccgcgcagaccatctatgaaactgctgctcgagagcatgagaaccgaggg
gtaactggagcggttggaggcgtcctccgccagattcctcctgctgtggtgaaacctctt
atcatggccacagaagcaacctcaaatgtccttggtggaatgagaaaccagataaggcca
gatgttcgacaagaagagtcacagaagtggcgccttggcgaggactaa
DBGET
integrated database retrieval system
