Geotrypetes seraphini (Gaboon caecilian): 117363446
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Entry
117363446 CDS
T09159
Symbol
MNAT1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03022
Basal transcription factors
gsh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117363446 (MNAT1)
09124 Replication and repair
03420 Nucleotide excision repair
117363446 (MNAT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117363446 (MNAT1)
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117363446 (MNAT1)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117363446 (MNAT1)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117363446 (MNAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-UDP
LMBR1
Motif
Other DBs
NCBI-GeneID:
117363446
NCBI-ProteinID:
XP_033807072
UniProt:
A0A6P8RNJ5
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All DBs
Position
7:146822861..147117462
Genome browser
AA seq
308 aa
AA seq
DB search
MEDQCCPRCKTTKYRNPSLKLMVNICGHTLCENCVELLFVRGAGSCQECGTALRKSNFRV
QLFEDPAVDKEVEIRKKVLKIYNKREEDFFSLEEYNDFLEDIEEIVFNLTNNVDLENTKK
KMELYQKDNKDVIQKNKIKLTREHDELEEALEVERQENAQRRLVIQKEEHLQQMLKRKNK
QALLDQLESSHLPASLLLAQHKDRSTQLEIQLEKPKQKPVTFSTGIKMGHLFSSAPKAKL
AEALYEYQPLQIETYGPQVPKLEQLGRLGYLKHVRAASPQDLAGGYTSSLACHRALQDAF
SGLFWQPS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcagtgttgtcctcgctgcaagactaccaagtaccgcaacccctcgctgaag
ctgatggtgaatatctgcggacacacgctgtgtgaaaactgtgtggaactgctatttgtg
agaggggctgggagttgccaggaatgtggcacagcattgagaaagagcaactttcgagtt
caactctttgaagacccagctgtagataaggaagtagagattcggaagaaagtgttaaaa
atatataataagagagaagaagactttttcagtctggaggaatataatgatttcctggaa
gatatagaagaaatagtttttaacttgactaacaatgtggatctggagaacaccaaaaag
aaaatggagttgtatcagaaggataataaagatgttattcaaaaaaataaaataaagctg
acacgagagcatgacgagttagaagaagctttagaagtggaacggcaagaaaatgcacaa
agacgactggtgatacaaaaagaggaacatctgcagcagatgctaaaaaggaaaaataaa
caagctcttctagatcagttggaaagctcccatctgcctgcctccctccttttagcacaa
cataaagacagatctacacagttggagattcagcttgaaaagcccaaacaaaaacctgta
acattttccactggcatcaaaatgggtcacctcttctcatcagcacctaaagcaaagctt
gcggaagctttgtacgagtaccagccacttcaaatagaaacctatggcccacaagttcca
aagcttgagcagctgggtaggctggggtatctaaagcacgtccgagcagcctctccacag
gatctagccgggggctatacttcctcccttgcctgtcacagggccctacaggatgctttc
agtgggctattctggcagccctcttaa
DBGET
integrated database retrieval system
