Geotrypetes seraphini (Gaboon caecilian): 117363480
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Entry
117363480 CDS
T09159
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117363480 (NPAS3)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117363480 (NPAS3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
117363480
NCBI-ProteinID:
XP_033807157
UniProt:
A0A6P8RNS4
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Position
7:complement(88871828..90831607)
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AA seq
954 aa
AA seq
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MVPAKPSFQQDPSRRERGGSRYLRACPVPCPPDLNLSLQALRKEKSRDAARSRRGKENFE
FYELAKLLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVT
PARLRGSHLNGCGGQIDGRSFAETNLGMQNCTNHLNCTRQDVPHWEWGEEREQNVIGAQR
RRSPSSVAIDVFEQHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSV
FDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTGEDGASSASSSQSETPEPVESTSPSLLVN
DNSLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRLRMSLSHGRTVPSQNMGMVIVA
HALPPPTINEVRIDCQMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAEDV
EGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWVQSCATISYSAKNANEKNIIWVNYILSL
PEYKDIAMDLAQLPHLPEKTSESSETSDSESDSKDNSEDNENSKSDEKGNQSENSEDPEP
DRKKSGNQSDNEMNCNEDRNSSSNQDSRDSEDSFENSDFENQKATEESFVSLSSMQIKVE
RYVESESDLRLQNCDSMTSDSAKDSDSVGEGNEQSSSKHQKRKKRRKKQKGGSNTRRRLS
STSSPNGLDSALVDQPQLLSSPNSASVLKIKTEISEPINFDNDSSIWNYPPNREISRNES
PYSMTKPPSAEHFPSPQASSSLHVSIPDSVLTPPGTENTASNRKTQFSSSSNTALAPGSS
DPLSPPLSASPRDKHPGGPGTSNSLLYTGDLEALQRLQAGNVVLPLVHRVTGTLAATSTA
AQRVYTTGTIRYAPAEVTLAMQGNLLPNAHTVNFVDVNSPSFGLDPKTPMEMLYHHVHRL
NMSGPFGSAVSGTGLTQMPAGNVFTTAEGLFSTLPFPVYSNGIHTTQTLERKED
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccgccaagccaagctttcagcaggatccttcaagaagagaacggggaggctcc
aggtatctgagggcatgtcccgtgccttgtccacccgatctcaacttaagtttacaagcc
ttgaggaaagagaaatcccgagatgcagctcgctctcgccgggggaaagaaaattttgaa
ttctatgagctggccaagttactgccgctccctgcagccattaccagccagcttgataag
gcatccatcatccgactcacaataagctatctgaaaatgagggactttgctaatcaggga
gatcctccatggaacttgaggatggaaggtccaccgcctaacacttctgtaaaagtcaca
ccagccagactgagggggagccacttgaatgggtgtggaggtcaaatagatggaagatca
tttgcagagactaaccttggcatgcagaactgcacaaaccatttaaactgcaccaggcaa
gatgtgcctcattgggagtggggagaggagagggaacaaaatgttataggagctcaacga
agaaggagtcccagttccgttgccatcgatgtgtttgagcagcatttgggaagccacatt
ttacagtccctggatggatttgtatttgcactaaatcaagaaggaaaatttttgtacata
tcagaaaccgtctccatctatttaggcctttctcaagtggaattgacaggcagcagcgtg
tttgactatgttcacccaggagaccacgtggagatggcggagcagctgggcatgaaacta
cccccagggcgaggcctcctctcacagggcacaggagaggatggagccagctcagcatct
tcctcacaatctgagaccccagagccagtggaatcaacaagtcccagtctactcgtcaac
gacaactccctggagcgctctttcttcatccgcatgaagtcaactctgacaaagagaggt
gttcacatcaaatcctcgggatataaggtgattcacataactgggcgactgcggctaagg
atgtcactatctcatgggcgaacagtccctagccagaacatggggatggtaatcgtcgct
catgctttgccacctcctacaattaatgaagtgaggatcgactgccaaatgtttgttact
cgtgtaaatatggatctcaatatcatttactgtgaaaataggattagcgattatatggac
ctgactcctgtagatattgtagggaagaggtgttaccattttatccatgctgaagatgta
gaagggatcaggcacagccacttagacttgttgaacaagggtcagtgtgtgaccaagtat
taccgctggatgcagaagaatggagggtatatctgggtacagtcttgtgctacaatttcc
tatagtgcaaagaacgcaaatgagaagaatattatctgggtcaattacattctgagcctt
ccggaatataaggacattgccatggatcttgcacagcttccccatttgccagagaaaacc
tcagagtcctcagagacttcagattcggagtctgattcaaaggataattcagaggacaat
gagaactcaaagtcagatgagaaaggaaaccagtcagaaaacagcgaggacccggagcct
gaccgaaagaagtctggaaaccagtcggataatgaaatgaattgtaatgaagacaggaac
agttccagtaaccaggacagcagggacagcgaggacagctttgaaaactctgactttgag
aatcagaaggccacagaggaaagttttgtgtccctcagttctatgcagatcaaggtggag
cgctatgtggagagtgaatcggacttgcggctacagaactgtgattcaatgacctcagac
agtgccaaggactcggacagtgtgggggaagggaacgaacagtcttccagcaagcatcaa
aagagaaagaagaggagaaaaaagcaaaaaggaggcagcaacacccgacgaaggctatca
agcacttcaagcccaaatggacttgactcagcattggtagaccagccacagctgctctct
tcgccaaacagtgcctcagtgctcaaaatcaaaaccgagatctcagaacctatcaatttt
gataacgatagcagtatctggaattacccccccaacagggaaatctcaaggaatgaatcg
ccctatagtatgaccaaaccccccagcgcagagcactttccctctccacaagccagcagt
agtttacatgtctccattccagactctgttctcaccccaccagggactgaaaatactgcc
agcaaccgtaaaactcagtttagctcctcgtctaacacagccttggcccctggatcctcc
gaccctttgtcacccccactttcagcctccccacgggacaagcacccaggaggtcctggc
acttccaactctttgctgtacactggggatctggaagcccttcagaggttgcaagcaggc
aatgtagtgcttcccttggttcacagggtaacaggaactcttgctgccaccagcacagct
gctcagagggtctataccactggcactattcggtatgctccagcggaggttactttggcc
atgcagggcaaccttctcccaaatgcccacactgttaactttgtcgatgttaacagccct
agctttgggctggatcctaaaacgcctatggaaatgctctaccaccatgttcaccgactc
aacatgtcgggaccatttggaagtgctgtgagtgggactggcctgacccaaatgcctgca
gggaatgtattcacaactgccgaaggacttttttccactcttcctttccctgtgtacagc
aatggcattcacactacacagactctggaacggaaagaggattga
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