Geotrypetes seraphini (Gaboon caecilian): 117363649
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Entry
117363649 CDS
T09159
Symbol
STAB2
Name
(RefSeq) stabilin-2 isoform X1
KO
K19013
stabilin-2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117363649 (STAB2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gsh00536
]
117363649 (STAB2)
Glycosaminoglycan binding proteins [BR:
gsh00536
]
Hyaluronan
Cell surface receptors
117363649 (STAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
EGF_STAB1-2
Xlink
EGF
cEGF
EGF_MSP1_1
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
117363649
NCBI-ProteinID:
XP_033807630
UniProt:
A0A6P8RQ76
LinkDB
All DBs
Position
7:21981848..22385353
Genome browser
AA seq
2555 aa
AA seq
DB search
MEARQMFFFLALCVAAISSNPKASSAAQVQNRCDEYALIPAKSVCQSCSLSLKFNCSKGY
TQTTIGVGIRDCRYYIETKTQSFSLPGCRHVCIKKYTLPRCCPAHWGLDCLECPGGAKSP
CKKRGSCSDGIQGNGTCTCQEGFGGTACETCSEDNLFGANCNSVCSCVHGLCNNGINGDG
TCTCLSGYAGRHCDQPLPECTKLQCPENTRCTSSTGGVLECACMPNYEGDGKQCKPINPC
TKTICSPNADCIYLGPNMHKCTCQEGYKGDGLVCLPFDPCQENFGDCPTNSSVCKYDGPG
KFHCECKEGYNSFQIGIGCNLPDICSVLNPCHKNAKCTTVAPKRTQCTCNTGYVGDGLLC
YGNILERIRDLNIEPGGTWKGKLTSAISLFDAAYSWSLSALGPFTALVPTNNGFKGVNMK
NILDNKNYAQFFAKLHIIAGQLTTDSFNNTDTIYTLTGKSGEVTNEGKDGPFKIRIHGSK
KKSKIIEGNIIASNGLLHIVDKAMDNVEPALESNTEKTIMEILEDNGRYNKFKSLLQKTN
LGEDLTKDGPYSIFVPNNEALDGMKNGTLDHLLSTQGSKKLLELLRHHIIPSVKLDVANL
ISFRRILSMANQLIQFNTTNNGQILVDGEEIEEADVAAKNGQIYILNGVLIPPSIVPILP
HQCNETKTELILGPCKSCYLIISSACPPNSKATNMFSNNCNYVLKKFGENYPRIGCARFC
NSTIVVPKCCKGFYGPDCSPCPGGYSNPCSGNGECNDGMNGNGTCICDEGFQGSLCQFCS
NPDKYGIRCDKSCPCLHGICDNRIDGDGNCLPGSCTSGYAGNLCDKKTAPCGPFVQYCHA
HANCEYSDGVPSCICKPGYEGDGTTCKEVNVCSASNSSLCNSNAECVQTGLGTYKCVCLP
GWAGNGLDCSAINNCFLPSNGGCHVNSTCIYIGPGQSDCECKKGFRGDGIQCEPINTCLE
QEQKCHYLATCQQTSFGLWKCVCQEGYEGDGTICYGNALNMLASLSEAAAFYRLINDATI
NTMMSEAKNITVLVPSLQAMKNMNQEDKAFWTSKDNSPTLLKYHVLNSLYTLDFLQNMSS
PSPLATTLQSQFLHLMKENGNVTIEGSNIIVADIAATNGIIHLIDKVLTPDRIISPVQPD
LMTQLHQKPNYSNFMGYIIQYGLLNTIEEAGSYTVFAPSNEAIETYIRNTKSVSLGENII
RYHIILGERLLKDDLHSGMHRETMLGSSYEVEFFINKDQLFVNEAAINYTNLSTNKGVIH
GLESVLEIEMNRCDHNYTQILKGECHECWLMPVCPEKTKLISKTREHCYRRYRSSYYGCR
PSCAREIITKQCCAGFYGQQCMVCPGQKKNPCFGNGICRDGINGTGTCQCAEGFSGTACE
LCVKGKYGSKCDQECPCIHGKCNEGIEGDGSCDCDFGWRGVKCEYEIKNDECSKTCHTSA
NCIVNSDGKAFCKCAAGFTGNGTLCTAIDACEISNGGCSVKAKCKKTSPGNRECICNADY
TGDGIVCLEIDPCSENNGGCDTNAECSKTGANKFECNCLRGYSGNGKICRSINPCLAGNG
GCSWNALCNHTGPAERTCTCKRGHIGDGIECRGTISQDLAKNPNVTLFNNYLTINGMKAL
SDAGPYTVFVPIDASNEELQIWKTIGLMPQILEYHIVTCKQLFFSELTSMTAVTSLQGES
IQITSSQNTVYLNNKSKIITSDLLYTNGIVHIVDKVLFPQEMLHKKSYSATSKLESLTDV
ADHHGYTTFRSLLQDTGLLSLINDPIHKPVTLFWPSDKTIKALPKEQQDFLFNKQNKDKL
VECLKFHVIRDAKIMSSDFLSRSSLKTLQGSDLSIKCGDDENIGALMLNTNTGQCKIVQR
QLEFEGGIAYGIDCLLTPPSTGGRCNHMLTFTVEGECGFCTINPRCPSGSKPTGVTKECA
GFSLRTRSSRFRCVMECLLVLWTEKCCNGYYGRDCQACPGGPVTPCNNHGRCDDGLGGKG
ECSCIADFNGTACELCLPGKYGPDCKACECTMHGQCDEGSTGSGECSCETGWTGRLCETK
LDLPPVCSPPCSENAICKEGNVCECNKHYDGDGITCTVVDLCKDNNGGCAASSKCTQSGV
KVTCSCQKGYKGDGYVCMAIDLCADGLNGGCHEHAVCIMTGPGKRRCECKDHYIGDGVNC
VVKELPINRCLLDNGLCHTDADCKDLHYHDTTVGIFHFKSPKGQYKLTYEEAKQACQDEG
ATIATYNQLSYSQKAGFHLCSAGWLDNKRLGYPTTYSSQKCGLGFVGIVDYGERVNLSET
WDVYCFRVKDVECMCKVGYVGDGYTCSGNMLQVLSSFPMFANFLSKILAYADSSMKGKEF
LNYLTNLSVQATLFAPRNDWLSENETLSERDIEYHVANESTLLYNDLANGSTLQTRISNK
LLITSSDDLDHKLFTSQTQQNESRFVNGRAILQWDIFASNGIIHVISEPLKAPLELPAAL
HAGHGAAIFFITILVVGLMALTRYIYKKFSKGQFRFQRLKPDEKISVSALINRKSPSIVN
PMYENSGSSPPESTFDQFSDTDDQQPVICHHLDLQ
NT seq
7668 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaagacaaatgttcttctttcttgccttatgtgtggctgctatcagcagtaat
ccaaaggcttcatctgcagcacaggtacagaaccgatgtgatgagtatgcactcatcccc
gccaagtctgtatgccagtcttgctctctaagcctgaaattcaactgttctaaaggttac
actcaaaccaccatcggtgtgggaataagagattgcagatattacatagagaccaagaca
caatccttctcccttcctggatgtcgccatgtctgtataaagaaatatactctgcctcgc
tgctgccctgctcattggggactagattgcctagaatgtcctggaggagccaaatctcca
tgtaaaaagagaggatcttgctcagatggtatacaaggcaatgggacctgcacttgtcag
gaaggatttggtgggacagcctgtgaaacatgttctgaagataatttgtttggtgctaac
tgcaattcagtttgcagttgtgtccatggtctatgcaacaatggaataaatggagatggg
acctgcacttgtttgtcaggatacgctgggcgtcactgtgatcagcctctccctgaatgt
acaaagctccagtgtccagagaacaccaggtgcacaagttccactggaggagtactggag
tgtgcttgtatgcccaactacgaaggggatggaaaacagtgtaaacctatcaacccttgc
accaaaaccatctgcagtcctaatgctgattgtatatatcttggacctaatatgcataaa
tgtacatgtcaagaaggttataaaggggacggcctagtttgcttacctttcgacccctgt
caagaaaattttggagactgcccaacaaactcttctgtctgtaaatatgatggccctgga
aagtttcactgtgaatgtaaagaaggatacaatagttttcaaattggaataggatgcaac
ttgccagatatatgttcagtcctcaacccctgccataaaaatgcaaagtgcactacagtt
gctccgaaacgaactcagtgtacctgcaatacaggctatgtaggagatgggctgctttgc
tatggaaatattctggaacgcatcagagacttaaacattgaaccaggtggaacatggaaa
gggaagttgacatctgccatatccctctttgatgctgcatattcctggtctctaagtgcc
ctgggaccatttactgcacttgttccaaccaacaacggtttcaaaggagttaatatgaaa
aatatcctggataataagaattatgctcaattttttgccaagctccatattattgctgga
caactgaccactgatagttttaataatacagatacaatctatactttaactggaaaatct
ggggaagtaacaaatgagggaaaggatggcccatttaaaattagaattcatggcagtaag
aaaaaatcaaaaatcatagaagggaatattattgcttccaatggattattacacattgtc
gacaaagcaatggacaatgtagagcctgctcttgagagcaacacagagaaaacaataatg
gaaatacttgaggataatggaagatacaacaaatttaaatccttattgcagaaaactaat
ctaggagaagatctgaccaaggatggaccttatagcatttttgtgccaaacaatgaagct
ttagatggcatgaaaaatggcactctggatcatctgctttctacacaggggtctaagaag
cttctggaactcttgcgacaccatatcatcccttcagttaagttggatgttgccaacctt
atctcattccgtcgcattttgagcatggctaaccagcttatccaatttaacacaacaaat
aatggtcagatactcgtcgatggggaagaaattgaagaggccgatgttgcagccaaaaat
ggccagatttacattctgaatggtgttctaattcctccttccatagtgcctattctccca
catcaatgtaatgagacaaaaactgaattgatactgggtccctgtaagagttgctatttg
attatatcgagcgcttgtcctcctaattcaaaagccacaaatatgttctcaaataattgc
aattacgtgctgaaaaagtttggagaaaactatccacgcatcggctgtgccaggttttgc
aattcaacaatagtggttcctaagtgttgtaagggtttctatggtccagactgtagtcca
tgtccaggtggatattccaacccgtgctctggaaatggggagtgtaatgatggtatgaat
ggaaatgggacttgcatttgtgatgaaggctttcagggatccctttgtcagttctgctct
aatccagacaaatatgggattcgttgtgataaatcttgcccttgtctgcatgggatatgt
gataatcgaatagatggtgatgggaactgcttacctggatcatgcacaagtggatatgca
gggaacctttgtgataagaagactgctccatgtgggccttttgtccagtattgtcatgca
catgcaaactgtgaatacagtgatggggtacctagctgtatttgcaaacctggttatgag
ggagatggaaccacatgcaaagaagtaaatgtctgttctgcctcaaatagcagcctttgc
aacagcaatgcagaatgtgttcagacaggccttggaacatacaagtgtgtatgtctacct
ggatgggctggtaatgggttggactgctcagcaatcaataattgtttcctacctagtaat
gggggttgccatgttaattctacctgcatttacattggcccgggtcagagtgactgtgaa
tgtaaaaagggctttcggggtgatggtattcagtgtgaaccaataaacacttgtctggaa
caagaacaaaaatgtcattacctggcaacttgccagcaaacatcttttggcctttggaaa
tgtgtttgtcaagaaggctatgaaggagatggcacaatatgttatggaaatgcattaaat
atgctggcttccctttcagaagcagctgcattttacagattaataaacgatgctaccatc
aacacaatgatgtcagaagctaaaaatataactgttcttgtgccctcacttcaagctatg
aagaacatgaaccaagaggacaaagccttttggacatctaaagacaatagtccaacatta
ttaaaatatcacgtattaaacagtctttatacacttgattttctccagaacatgtcttcc
cccagtccactggcaactactctacagagtcaatttttgcatttgatgaaagagaatggg
aatgtaactattgaaggctcgaacattatagtcgctgacatagcagcaaccaatggaatt
atacatctgatagacaaggtcctgaccccagatagaatcataagccctgtacagccagat
ctaatgacacagttacaccaaaaacccaactactccaatttcatgggttatatcattcaa
tatggcttgctaaacacaattgaagaagctggaagttacactgtctttgccccaagcaat
gaagccattgagacctacatccggaatacaaaatctgtttcattgggagagaatataatc
aggtaccatattattttgggagagcggctcttgaaggatgacctacacagtggcatgcat
cgagaaaccatgcttggatcttcatatgaagtggagttctttatcaacaaagaccagttg
tttgtaaatgaagctgcaataaattacaccaatctttcaactaacaagggggttatccat
gggctggagagtgtactggaaattgagatgaacagatgtgaccataattatacccagatc
ctgaagggagagtgtcatgagtgttggttgatgccagtctgccctgaaaaaacaaaacta
atttcaaaaacgagggagcactgctatagaaggtatagaagttcatattatggatgtcgg
ccatcatgtgccagagaaattattaccaaacaatgctgtgcaggtttctatggtcaacaa
tgcatggtctgccctgggcaaaaaaagaacccatgctttgggaatggaatctgcagggat
ggtattaatggtacaggcacatgtcaatgtgcagaaggattcagtgggacagcctgtgag
ctttgtgtcaaaggcaaatatggatccaaatgtgatcaagaatgtccttgcatccatggc
aagtgcaatgaaggaattgaaggtgatgggtcgtgtgattgtgactttggctggagaggt
gtcaaatgcgagtatgaaatcaagaatgatgaatgcagtaaaacatgccacaccagtgct
aattgcattgtaaattctgatggcaaagccttctgtaaatgcgcagctgggttcacagga
aacgggacactatgtacagctattgatgcatgtgagattagcaatggaggttgctctgtc
aaagcaaaatgtaagaaaaccagcccaggaaatcgtgaatgtatttgcaatgctgattac
acaggagatggcatagtgtgcctggaaatcgacccctgctcggagaataatggtggatgt
gataccaatgcagagtgcagtaaaacaggggctaataagttcgagtgtaactgtttgcga
ggatattcgggaaatggtaaaatatgtagatctataaacccatgtttggcgggaaatggt
ggttgctcttggaatgcgctttgcaatcatactggaccggcagaaaggacctgcacatgc
aagaggggccacattggtgatggaattgaatgcagaggtaccatcagccaggatcttgct
aagaatcctaacgtaacactttttaataattatctaacgataaatggaatgaaggctctt
tctgatgcaggcccatatactgtttttgttcccattgatgcttccaatgaggaattacag
atatggaaaactattggactgatgcctcagattctcgagtaccatattgtgacctgcaaa
cagcttttctttagtgaactgacatccatgacagcagtcacctctctgcaaggagaatct
atccaaatcacatcctcacagaatacagtgtatttgaataacaagtctaagataataacc
agtgatcttctttatacaaatggtatagtgcacattgtagataaagttctattccctcag
gaaatgcttcacaagaaatcatattctgctacctccaaactggaaagccttactgatgtt
gcagaccatcatggatacacaacatttcgcagtttattgcaggacacaggcttgctaagt
ctcatcaatgatcctattcataagccagttaccttgttctggccttcagataaaactatc
aaagccctgcccaaggaacaacaggatttcttgtttaacaaacaaaacaaagacaagctt
gtggagtgtttgaagtttcatgtcattagagatgccaagattatgtcctcagatttcctt
agccgaagttctttgaagacactccagggctcagatctcagtataaagtgtggagacgat
gaaaacattggagctctgatgctgaacaccaacactggacaatgtaagatagtgcagcgc
cagctggagtttgagggtggtattgcctacggcattgactgcctgttaacacctcccagc
accggtggccgatgtaaccacatgcttactttcacagttgagggtgagtgtggcttctgt
actattaatccgagatgcccttcagggagcaaaccaacgggagtgacaaaggaatgtgct
ggttttagtttgcgtacaagaagctcaaggtttcgttgtgtcatggaatgtttactagtg
ttatggacagaaaagtgttgcaatggttactatggacgggactgtcaagcttgccctggg
gggccagtgaccccatgtaacaatcatggtaggtgtgatgatggattaggaggaaaagga
gagtgctcctgcatagctgacttcaatgggacagcatgtgagttgtgtctgcctggaaaa
tatggaccagactgcaaagcctgtgagtgcaccatgcatggacagtgtgatgaaggctcc
actggctcaggagaatgttcctgtgaaactggatggactggacgactctgtgaaacaaaa
ttagatttaccacccgtctgttctcctccatgttctgaaaatgccatatgtaaggaaggg
aatgtctgcgaatgtaataaacactatgatggtgatggaataacatgtacagttgtagat
ctttgtaaggacaacaatggtggttgtgcggcatcttcaaaatgtactcagagtggtgtg
aaagtgacttgcagctgtcagaagggatataaaggggatggctatgtatgcatggctata
gacctttgtgctgatgggctcaatggtggctgtcatgaacatgccgtgtgtataatgact
ggacctggcaaacgcagatgtgagtgcaaggatcattacattggcgatggggtgaattgt
gtggtgaaagaacttcccatcaatcgctgtttgctagacaatgggctatgccacacagat
gctgactgcaaggatctccactatcatgatactaccgttggcattttccactttaagtct
ccgaagggacagtacaaactgacatatgaagaagcgaagcaggcctgtcaggatgaaggg
gcaacgatagctacatataatcaactgtcctattctcaaaaggcgggattccacctctgc
tctgcaggctggctggataacaaaagactgggctatccgacaacgtattccagtcagaag
tgtggccttggttttgttggaatcgtagattatggtgaacgagtcaatctcagtgaaact
tgggatgtttactgcttcagagtaaaagatgtggagtgtatgtgtaaagttggttatgta
ggagatggctacacctgcagtggaaacatgctgcaggtcttatcgtcctttcccatgttt
gcaaattttctatcgaaaattctagcatatgccgacagctcaatgaaagggaaggaattc
ctgaactaccttactaacttatcagtccaagctacactttttgcaccaaggaatgattgg
ctgagtgaaaatgagacactttctgaacgtgacatagaatatcacgttgccaatgagagc
accttgttgtataatgatttggccaatgggagcactctgcaaaccaggataagcaacaag
ctactcattacatccagcgatgacctggatcacaaactcttcacttctcagactcaacag
aacgagagccgatttgttaatggaagagctattcttcagtgggatatatttgcttcaaat
ggaataatccatgtcatttcagaacctctaaaagctccactcgagctacctgctgctctt
cacgctggacatggagctgccatctttttcattaccatcctggtggttgggctcatggct
ctgactaggtatatatacaagaaattcagcaaaggacaattccgcttccagcgactcaag
cctgatgaaaaaataagcgtatcagcactaataaatcgtaaatctccaagtattgtcaat
cctatgtatgaaaattctggttcttctccacctgaatctacctttgaccagttttctgac
actgatgaccagcagccagtaatatgtcatcatcttgatctgcaatga
DBGET
integrated database retrieval system
