Geotrypetes seraphini (Gaboon caecilian): 117363656
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Entry
117363656 CDS
T09159
Symbol
RTF1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117363656 (RTF1)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
117363656 (RTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
117363656
NCBI-ProteinID:
XP_033807645
UniProt:
A0A6P8RQ89
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All DBs
Position
7:complement(118183050..118377375)
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AA seq
674 aa
AA seq
DB search
MVKKRKGRVVIDSDTEDSGSDENLDQELLSLAKRKRSDSEEKEQPVTKPSASSDSETSDS
GDEWTVGGSKNKKKVKTGKGGEKKGAMKKQTSKATSSGSSDKDSTAESSAPEEGEVSDSD
SNSSSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLK
RRFEIKKKLETAKKKEKKEKKKKKKQEEEQEKKKLTQIQESQVMSHNKERRSKRDEKLDK
KSQAMEELKAEREKKKNRTAELLAKRKQPLKTSEVYSDDEEEEEDDKSSEKSDHSSRSSS
SDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVAGCFVRIGIGNHNS
KPVYRVAEITGVVETGKVYQLGGTRTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWK
EAMFSAGMQLPTLDEVNKKEVAIKEAVNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQL
LKEKAMAEEAGEPEKVKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESE
KALVAESQSMKHQQMDPFTRRQCKPTMVSNSRDPAVQAAIIAQLNAKYGSGITQETPKEK
SMVQGKDKDLNSKSANDLSEDLFKVHDFDVKIDLQVPSSESKTLAISSKAPPAKDGAPRR
SLNLEDYKKRRGLI
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaaagcggaaaggccgcgtcgttattgactcggacacggaggacagtggtagc
gatgaaaacctcgatcaggagcttttgtcattagctaagcgtaagcgcagtgactctgag
gagaaagaacagcccgttaccaagccttcagcgtcctcagattctgagacatcagacagc
ggtgatgaatggacagttggaggctccaaaaacaagaagaaggtgaaaactggaaaggga
ggagagaagaaaggagccatgaagaaacaaacgagcaaagccacctcttcagggagctca
gataaagacagcacagcagagagctcagcacctgaagaaggtgaagtgtcagattctgac
agcaacagttcatcctccagctccgattctgactcttcatctgaggatgaggagttccat
gatggttatggtgaggatctgatgggagatgaagaagacagggcacggctggaacaaatg
acagaaaaagagagggagcaggagctgtttaaccgaatagaaaaaagagaagtgctgaaa
cgacgatttgaaataaaaaagaagctagaaacagcaaaaaagaaagaaaagaaagagaag
aagaaaaagaagaaacaagaggaagagcaagagaagaagaaactcacccagattcaagaa
tcccaggtgatgtcgcacaacaaagagcgacggtcaaagcgggatgagaaactggacaag
aaatctcaagccatggaggagctgaaagctgagagggaaaaaaagaaaaacagaacagcg
gaacttcttgctaaaagaaaacaaccgttgaagacaagtgaagtgtactcggacgatgaa
gaggaagaagaagatgacaagtccagtgagaagagcgatcattcttctaggtcatcctca
tctgatgaggaggaagagaaagaagaaataccacctaaatctcaaccagtttctttacct
gaggaactaaacagagtgcggttatcacggcataagctggaacgttggtgtcatatgccc
ttctttgctaaaactgtagcaggctgttttgtgaggataggtattggaaaccacaacagc
aagccagtgtatagggtggctgaaatcactggtgtggtcgaaactggcaaagtttatcag
ctaggaggtactagaacaaataaagggctacagttacgccatggcagtgaccaacgagta
ttccgccttgaatttgtctcaaatcaggagttcacagagagtgaatttatgaaatggaaa
gaagcgatgttctctgcgggaatgcagctacccacgctagatgaggtcaacaagaaggaa
gtggccattaaagaagctgtcaactacaaattcaatgatcaggacatcgaggaaattgtg
aaagagaaagaacggttcagaaaagctccacccaattatgctatgaaaaaaactcagctc
ttaaaggaaaaggctatggcagaagaggctggggagccagagaaggtcaaacagattcaa
gaccagctgaatgagctggaggagagagcagaggcactagatcgtcagcgaacgaaaaac
atatctgccattagttacataaaccagagaaatcgagagtggaacatagtggaatctgaa
aaggctcttgttgctgaaagtcaaagcatgaagcaccagcagatggatccctttacccgg
cggcagtgtaaacctaccatggtctccaattctagggatcctgcagttcaagctgcaatc
attgcacagctgaatgcgaaatatggctctggtataacacaagaaactccaaaggagaaa
agcatggttcagggcaaggataaagatttgaactccaagtctgcaaatgacctctcagag
gatctgttcaaagtgcatgactttgatgtgaagatcgaccttcaagtccccagctcggaa
tccaaaacactggccatctcctccaaagctccccctgcaaaggatggtgccccccggagg
tcattaaaccttgaggactacaagaagaggcgagggttgatctga
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