Geotrypetes seraphini (Gaboon caecilian): 117363699
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Entry
117363699 CDS
T09159
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117363699 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117363699 (POLR1A)
Enzymes [BR:
gsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117363699 (POLR1A)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117363699 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
117363699
NCBI-ProteinID:
XP_033807728
UniProt:
A0A6P8RR30
LinkDB
All DBs
Position
1:complement(274047090..274280062)
Genome browser
AA seq
1724 aa
AA seq
DB search
MVVSGAVVPWRLLRGVSFGMYSTEEIRKLSVKAITNPRYLDNVGNPAVNGLHDLALGPSD
FREVCSTCAQDFNSCPGHLGHIELPLTVYNPLFFDRLYILLRGSCFNCHMLTCSRAVVHL
LLNQLKLLETGELQSVYELEGVLHRFLEENPDASGNEIQEELDRFTCELLQKNPVGIESS
HVKNVCECRSRLIGEFWKSHMKAKRCPHCKTGKSVLRKEHNSKLTITYPSNVHKTPRKGR
EGMAQQPEGIDETQLGQRGYLTPNTAKEHIMALWENEGFFLSHFFAGLETSGNCEADFGP
DMFFLDLVVVPPSRYRPMNCLGDQMFTNGQTVNLQAVVKDAGTIQKLLALMAQKQQLNPQ
LLETETEVENQHSESMDHAFLSMIPGQTLTEKLYNAWIQLQSHVNIVFDSDMDKLKTDKY
PGIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTP
WNVQELRHAVMNGPNVHPGATMVINEDGSRTALSSTNQSQREAVAKQLLTPSTGTHKGLK
IVSRHVKNGDILLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNA
HFPQSELGRAEAYMIACTDEQYLVPKDGKPLAGLIQDHMVSGASMTIRGRFFTREQYMEL
VYRGLMDKNGRVKTLMPAIIKPYPLWTGKQVVSTLLINVIPENHIPLNLSGKAKINGKAW
VKEPPRAVPGFNPDSMCESQVIIRKGELLCGVLDKAHYGSSVFGLIHCCHELYGGETSGK
LLTCLARLFTAYLQLYRGFTLGVEDILVRPRADVKRQKIIEESTHCGTRAVRAAFSLPNT
ASTDEIRGKWQDAHLSKDQRDFNMVDLKFKEEVNYFSNKINKVCMPLGLHRHFPENNLQM
MVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMPSGKSLPCFEPYDFSPRSGGFVTGRFL
TGIKPSEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVIQ
FLYGEDGLDIPKTQFLQPKQFPFIADNYEVIRKSKHLNEVLARMDTEHANKHFQSLKRWK
AKNPTTLQKRGAFLLFSQKKKARENALSQPGDLISGRDLATKQLLERWYAVDEKTESKYR
RKTAHCPDPCLALYRPDIFFGSVSETFENKVNSYIEEWETQDNQEYRRSELTLDRLKTLL
HLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMAAS
ANIKTPMMSIPVLNTKKALKKVKKLKKQLTRVCLADVLHKIDVQETFRVEGKLSKCHVYQ
IKFHFLPYKHYQQEKCLKPDDILHYMETRFFKLLLETIKRRSTKLASFRTVSTQKVTRKD
LDDDNRELQENMQQDDSEPEIAESGKIVDGEADEGDADATEEKRKQKQEEEIDYESEEEE
GEENEESTEEEEEPSSLVNKSSSSAEQETESSLSVTEESLPPASSAARSEKRKSTSQTAG
MSEQRINAVLDNYQAVEHYAYDTEEGLWCEITLKLPLIKVYFDISSLVVFLAQNTIIHDT
RGITRCLLNETTNQHGEKEHVLNTEGINLPELFKYADILDLRRLYSNDIHAMARTYGIEA
ALRVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRFGMQSNSSPLQQMTFET
SYKFLKEATLMGARDELRSPSACLVVGKVVKGGTGLFDLKQPLK
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgtctggtgcagtggttccttggaggctcctgcggggtgtctcttttgggatg
tattccaccgaggagattagaaaattaagtgtgaaggccattacaaaccctcggtacttg
gataatgtgggaaacccagctgtaaatggactacatgacttggcattgggacctagtgac
ttcagagaagtgtgttctacctgtgcacaggattttaacagctgcccagggcatctgggt
catattgaacttccactgacagtctacaatcctctgttctttgatagactgtatattctg
cttcgaggctcctgttttaactgccacatgctgacatgttctcgtgctgttgtgcatttg
ctgctgaaccaactgaaactcctagaaactggagaacttcagtcagtgtacgagctggag
ggtgtactacatcggtttcttgaagaaaatccagatgcttctggaaacgagattcaggaa
gagttggatcgattcacttgtgaactattacagaaaaacccagtaggaattgagagctca
catgtgaaaaatgtttgtgagtgcagaagtagattgattggagaattctggaagtctcat
atgaaagcaaagaggtgtccacattgcaagactggaaaatctgtcttgcgaaaagaacac
aacagcaaactgacaatcacttacccatccaacgtacataaaacacctaggaaaggcaga
gaaggaatggcacagcagccagaagggattgatgaaacacagctgggacaaagaggttac
ttgacacctaatactgccaaggaacacatcatggcattatgggaaaatgaaggtttcttc
ctaagtcacttttttgctggactggagactagtgggaattgtgaggctgattttggtcca
gatatgttcttccttgatcttgttgtggtgccaccttcccgatatcggccaatgaattgt
cttggagatcagatgttcactaatggtcagactgtgaacctgcaggccgtggtaaaggat
gctggtacgatacagaagcttttagctctcatggctcagaagcaacaactgaatccccag
ctcttggagactgaaactgaggtggaaaatcagcactcagaatctatggatcatgctttc
ctgtccatgatcccaggacagaccttaacagagaagctgtacaatgcctggattcagctg
cagagtcatgtcaatattgtgtttgatagtgacatggacaagctaaagacagataaatac
cctggcatccgtcagatcttggaaaagaaggagggcctgttcaggaagcatatgatggga
aaacgtgtggactatgctgcccgctcagttatctgcccagatatgtacatcaacacgaat
gaaattgggattcctatggtgtttgctactaaactgacctaccctcagccagttactccc
tggaatgtacaggagctcaggcatgcagtcatgaatggacccaacgtgcacccaggtgcc
actatggtaataaatgaagacggctctcgcacagctctaagttctacaaaccaaagccag
agagaggctgtggccaagcagctcctcactccatccacagggactcacaaaggattgaag
atagtatctcgtcatgtgaaaaatggagatatccttttattgaatcgtcagccaactctt
cacagaccgtccatccaagctcaccgtgctcgaattttaccaggagaaaaagtgttgcga
cttcactatgctaactgcaaagcctataatgcagactttgatggggatgaaatgaatgct
catttcccacagagtgaactgggccgagctgaagcctatatgatagcatgtacagatgaa
cagtacttggttcccaaggatggaaaacctttggcaggtttgatccaagatcatatggtt
tctggtgccagcatgactattcgtggtcgctttttcacacgagagcagtacatggagcta
gtttatcgagggctgatggacaaaaatggacgcgtgaaaactcttatgccagctattata
aaaccatatccactttggacaggaaaacaggttgtctctacgttgctaataaacgtaatc
ccggaaaatcatatccctttgaatttgtcaggaaaagctaagattaatgggaaagcctgg
gtgaaagaacctcctcgggcagttcctggtttcaatccagattctatgtgtgaatctcag
gtaattattaggaaaggggagttgctctgtggtgttctggacaaggctcactatggcagt
tctgtgtttggtttgatccattgttgtcatgagctatatggtggggaaaccagtggcaaa
ctgcttacatgcctggctcgccttttcaccgcatacctacagctctacagaggattcacc
ttgggagtggaagacattttggtcagacccagagcagatgtcaaaagacagaaaattatt
gaagaatccacccactgtggcaccagggcagttagagctgcattcagtctgcccaacact
gcatccactgatgagattcggggaaaatggcaagatgcccacctcagcaaagaccagagg
gattttaacatggttgatctaaaattcaaggaggaagtaaattatttcagcaataagatt
aacaaggtgtgtatgcctcttggtcttcatagacatttcccagagaacaacttacagatg
atggtgcaatctggagccaagggatctactgtaaataccatgcagatttcttgcctgttg
ggtcagattgagttagaaggtcggagacccccactgatgccttctgggaaatcactacca
tgctttgagccatatgacttttctcctcggtcaggtggatttgtcactggtagatttctc
accggtatcaaaccttctgaattcttctttcactgtatggctggtagggagggccttgta
gacaccgctgtcaaaaccagtcgctctggataccttcagaggtgcatcataaaacactta
gaagggcttgtggtccagtatgacctcacagtacgagacagtgatggaagcgtcattcag
ttcctctatggagaagatggcctagacatcccaaagacacagtttttgcagcctaaacag
ttcccatttattgctgataactatgaggtgataaggaagtcaaaacacttaaatgaagtt
ttggcaaggatggatactgaacatgcgaataaacacttccaatccctcaaaagatggaaa
gccaaaaatcccaccacattacagaaacggggagccttcctgctcttttctcagaaaaaa
aaagcaagagaaaatgcactgagccaaccaggagacctcattagtggcagagaccttgca
accaagcagttattggaaaggtggtacgctgtggatgagaagactgagagcaaatatcga
aggaaaactgctcactgtccagacccatgcctagctctctaccgtccagatattttcttt
ggatcggtatcggaaacatttgaaaacaaagtgaacagttacattgaagaatgggaaacc
caagacaaccaagagtaccgaagatcggagctgactttagataggttgaagacgctactc
catttaaagtggcagcggtcgctttgtgacccaggggaagcggtcgggcttttggctgct
cagagcattggtgaaccttccacacagatgacgctaaacacttttcactttgctggcaga
ggggaaatgaatgtcacattgggtattccaaggctgagggaaatcctcatggcggccagc
gctaatattaaaactcctatgatgagcattccagtactgaacacgaagaaagcgctcaag
aaagtgaaaaagctaaagaaacagctcactcgagtgtgcttggcagatgtgctgcataaa
atagatgtacaggagactttccgagtggaagggaaattaagcaaatgtcatgtataccaa
atcaagtttcatttcttgccatataaacattatcagcaagagaagtgtctgaagccagat
gatattttacattatatggaaacaaggttctttaagcttttgctggaaacaattaaaagg
agaagtaccaagctggcttccttcagaacagttagcactcagaaggtaactcggaaggat
ctggatgacgacaacagagaactccaagaaaacatgcaacaggatgatagtgaacctgag
attgcagaaagtgggaagattgttgatggagaggcagatgagggagatgctgatgccaca
gaagaaaaaaggaagcaaaagcaagaagaagagattgattatgagagtgaggaagaagag
ggtgaagagaatgaggaaagcacagaggaggaagaggagccatcctcccttgttaataaa
agctcctcaagtgctgagcaggaaactgagagttctctttcagtcactgaagagagtctt
ccacctgcttcctcagctgctcgctcagaaaaaaggaaaagcacctcccagacagcagga
atgagcgagcaaaggattaacgctgtgctggacaattaccaagcagtggaacactatgca
tatgacacagaggaaggcctgtggtgtgagatcacattgaagctgccactgataaaggtg
tacttcgatatctcttcccttgtggtcttccttgcacaaaacaccataatccacgataca
agagggatcacacgctgtctcttaaatgaaacgacaaaccagcatggagaaaaggaacat
gttctgaacacagagggcataaacctccctgagcttttcaaatatgcagacattttggac
ctgaggcgactttattcaaatgacattcatgcaatggctcggacttatggcatagaggca
gccctgagagtgatagaaaaggaaatcaaagatgtgtttgctgtgtatggtattgaggtg
gatccccgtcatctgtctctagtagcagattatatgtgctttgaaggagtttacaagcca
ttgaatcggttcgggatgcagtcaaactcctcccctcttcagcagatgacatttgaaacc
agctacaagtttttgaaggaggcaactttaatgggtgctcgtgatgaacttcgatctcct
tctgcctgtctggttgttggaaaagttgtcaaaggaggaactggcttgtttgatctaaaa
caaccacttaagtag
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integrated database retrieval system
