Geotrypetes seraphini (Gaboon caecilian): 117363838
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Entry
117363838 CDS
T09159
Symbol
SMYD1
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh00310
Lysine degradation
gsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117363838 (SMYD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117363838 (SMYD1)
Enzymes [BR:
gsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
117363838 (SMYD1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
117363838 (SMYD1)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117363838 (SMYD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-MYND
SET
TPR_12
FRG1
Motif
Other DBs
NCBI-GeneID:
117363838
NCBI-ProteinID:
XP_033808151
UniProt:
A0A6P8RTF7
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Position
1:complement(275978990..276083544)
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AA seq
502 aa
AA seq
DB search
MTADSMENVELFSSEGKGRGLKAVKEFCAGDVIFAEPAYAAVVFDSLTAHVCHNCFKRQE
KLQRCGQCKFAHYCDRTCQKDAWTNHKNECSSIKKNGKIPNENIRLAARIMWRIEREGTG
LTEGCLVSIDDLQNHVDNFGEEEKKELMADVQTFTDFWPPSSQQFGMQYISHIFGVINCN
GFTLSDQRGLQAVGVGIFPNLCLVNHDCWPNCTVIVNNGNHEAVKSMFHTQMRIELRSLG
KVDKGEELSVSYVDFLNLREERKQQLKRQYYFDCTCEHCTKGLKEDLMLGVKEESKVPCN
VPLTKLPSSQGVAKEVIQFSKETMEKISKARSEGAYHEVVKLCRECLKKQEPVLADTNIY
MLKILSLTSEVLSYLQNFEEAAEYARRMVEGYLKLYHSNNAQLGMAVMRAGVTHWHAGLI
EVGHSMICKAYAILLVTHGPTHPITKDLEAMRVQTEMELRMFKENEFVYHKMREAALKNQ
PMHIMPEPRNNSISSSIFHKKQ
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagacagcatggagaacgtggaattgttcagctcagaaggcaaaggccggggg
ctaaaagcagtgaaagaattctgtgctggagatgtcatttttgcggagccagcttatgct
gctgtggtgtttgacagccttactgcccatgtgtgccataactgctttaagaggcaagag
aagctccaacgttgtggacaatgtaagtttgcccactactgtgatcgaacctgtcagaaa
gatgcctggacaaatcacaaaaatgagtgctcttctatcaagaagaatgggaaaatacct
aatgaaaatatcaggcttgcagcccgtatcatgtggcgaatagaaagagaaggaactggc
ctcaccgagggatgcttagtctccattgatgacttacagaaccatgtggacaactttggg
gaagaggaaaagaaagagctcatggctgatgttcagacctttactgacttttggccacct
tcaagccaacagttcggaatgcagtacatctctcacatatttggtgtgatcaactgtaat
ggttttaccctgagtgaccaaagaggactgcaagcagtgggtgtagggatttttcccaat
ctttgcctggtgaaccacgattgctggccaaactgtaccgttatagtcaacaatggcaat
catgaggctgtaaagtcaatgtttcacactcaaatgagaattgagttgcgttcacttggt
aaagttgataagggagaagagctgagtgtgtcttatgtggatttcctgaatctgcgtgaa
gagcgaaagcagcaactgaagagacagtactactttgattgcacgtgtgagcactgcaca
aaaggactcaaagaagacttaatgctgggtgtgaaagaagagagcaaggtaccatgcaat
gtcccgctcacaaaattaccgtcatcacagggagttgcgaaggaagttattcagttttcc
aaagaaaccatggagaaaattagcaaggcacgctctgaaggagcatatcatgaagtggta
aagctctgccgtgagtgtctgaagaaacaggaacctgtcttagctgatactaacatttac
atgctgaagattctgagtttaacatctgaggtgctgtcttacctccagaacttcgaagaa
gcagcagagtatgccaggaggatggtagagggttacctaaaactgtatcattcaaacaat
gcacagttagggatggcagtaatgcgggcaggagtgacacattggcatgctggtctcatt
gaagttgggcacagtatgatatgcaaagcctatgctattcttttggtgacccatggacct
acccatcctattaccaaagacttggaggccatgcgtgttcagactgagatggaactacgc
atgtttaaagaaaacgagtttgtgtaccacaagatgcgagaagctgccctcaaaaatcag
ccaatgcacatcatgccggagcccagaaacaacagcatatccagcagcatattccacaag
aagcaataa
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