Geotrypetes seraphini (Gaboon caecilian): 117363913
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Entry
117363913 CDS
T09159
Symbol
SLC6A12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117363913 (SLC6A12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsh02000
]
117363913 (SLC6A12)
Transporters [BR:
gsh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117363913 (SLC6A12)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117363913
NCBI-ProteinID:
XP_033808373
UniProt:
A0A6P8RT16
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Position
7:complement(42557126..42716282)
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AA seq
617 aa
AA seq
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MDGKMHVEESNVVLQPEHLKNEKEDETQKELEERGQWSNKVEFVLSVAGEIIGLGNVWRF
PYLCYKNGGGAFFIPYFIFLFTCGIPVFFLETSLGQYTSQGGVTAWRKICPVFEGIGYAS
QVIESYLNIYYIIVLAWALYYLFSSFAAELPWAHCNHTWNTENCVEFAEESNWTLSVNTN
ATSPVIEFWENRVLGLTDGIHNLGTVRWELALCLLLAWVICYFCIWKGVKSTGKVVYFTA
TFPYLMLIILLVRGVTLPGAYEGIMFYLKPEISRLADPQVWMDAGTQIFFSYAICQGCLT
ALGSYNKYNNNCYRDCIALCFLNSITSFVAGFAIFSVLGFMAREQGVHISEVAESGPGLA
FIAYPKAVTMMPVSQLWSCLFFLMLIFLGLDSQFVCVESLVTAIVDMFPAVFRKRFRREL
LILGIAVVCYLIGLLLVTEGGMYIFQLFDYYAASGTCLLFVAYFEAICIGWVYGGNRYYD
NVEDMIGYRPWPLVKLCWQVVTPAVCLGTFLFSLIKYTPLKYNNKYVYPPWGYAVGWLMA
LSSMICIPLYAIYYFLRTEGSLSKRLQQLIAPAEDLPQPKKYLPNFGQQWNCSDLGFRPP
PFSAKEGLMPLDTETHF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggatggtaagatgcatgtggaggagtccaatgtagttttgcaacctgaacatttaaag
aatgagaaagaggatgaaactcaaaaggaattggaagaaagaggacagtggagcaacaaa
gtggagtttgttctctcagttgctggagagattattggtctgggaaatgtttggcgattc
ccttatctttgctacaaaaatggaggtggtgctttctttatcccatactttatctttctc
ttcacctgtgggattccagtgtttttcttagagacatcacttggacagtacactagccag
ggaggagtcactgcatggcggaaaatttgtcctgtctttgaaggaattggatatgcctcc
caagtaatagaatcctacctgaacatctactacatcatagtcttggcatgggccctttac
tatttgttcagctcctttgctgcagagctcccgtgggcccactgcaatcacacctggaac
acagaaaactgtgtggagtttgcagaagaatctaattggaccttgtcagtgaataccaat
gctacctcccctgtcattgaattttgggaaaatcgggttctgggactcacagatggtatt
cacaatctgggcactgtgagatgggaattggctttgtgtctccttctggcctgggttatc
tgttacttctgtatctggaaaggagtcaaatccacaggcaaggttgtctacttcacagcc
accttcccttatttgatgctaattatcctgctggtccgaggggtcacattgcctggtgcc
tatgaaggaataatgttctacctgaaacctgaaatttcaagacttgcagatccacaggtt
tggatggatgcgggcactcagatctttttctcctatgctatttgtcaggggtgcttaaca
gcactgggcagctataacaagtacaataacaactgttacagggactgcattgcactctgt
ttcctgaacagcattacaagctttgttgctggctttgccatcttctctgtgctgggtttc
atggcccgtgagcagggtgttcacatttcagaggtggctgaatcaggaccaggtttggca
ttcattgcatatccaaaggctgtgactatgatgccggtgtctcagctctggtcatgcctt
ttcttccttatgttgatcttcctgggactagacagccagtttgtctgtgtagagagcctg
gtgacagctattgttgatatgttcccagctgtatttcgcaagcgttttcgacgggagctg
ctgatcttggggattgcagttgtgtgctatctgattggactacttttagtcactgagggt
ggaatgtatatcttccagctctttgactactatgctgccagtggaacatgcctgcttttt
gttgcctattttgaagctatctgcatcggctgggtatatggtggaaatcgttactatgat
aatgttgaggacatgattggctaccggccctggccactggttaaactttgctggcaagtt
gtcacaccagctgtttgtttgggaacatttctgttttcactgattaagtacacacccctt
aaatataacaacaagtatgtctaccctccctggggttatgctgttggctggctgatggca
ctctcatcaatgatctgcattcctttgtatgccatctactactttttaagaactgaagga
tcattgtcaaagcgattgcaacaacttattgctccagcagaagacttgccacagccaaag
aagtatctacctaactttggacagcaatggaactgctcagatctggggtttaggccccca
cccttttcagctaaggaggggctcatgcccttagacacagaaactcacttctaa
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