Geotrypetes seraphini (Gaboon caecilian): 117363940
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Entry
117363940 CDS
T09159
Symbol
CAPRIN2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117363940 (CAPRIN2)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117363940 (CAPRIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
DUF1179
Motif
Other DBs
NCBI-GeneID:
117363940
NCBI-ProteinID:
XP_033808431
UniProt:
A0A6P8RUE5
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All DBs
Position
7:53089198..53420727
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AA seq
1025 aa
AA seq
DB search
MLYSYFYLAPSVSMVQLSPSPFRRLSPSGCSSEKGMKPAKEQTGESQHVLTPLQTPLSSA
STPFQAYETYVDNGMICLKHKIRNIEKKKMKLDDYKQRMQNGESLNQDQLEAVEKYDEVI
HNLEFAKELQKTFTALGQELLKAQKKALRREAILKIELDKKKLRTIFHAQYVLKNLRQEH
VQKDFREGCNGASYLSSKELDYLIKFSKLTCPERKKSMSLEDQMEQTAFYFWDLLEGSEK
AVAGTTYKVVKNLLSMMLDGGYFESIPVPPIVKKNQVMEVLKRPEKHVVEEEILKKPEIE
PFPKVEPAKEPEPPKVLAQSIDKHPCEFLNRRYLLETEQHKNAEEPKPWDAGFIRKQQSP
KPLEVHTEKEQLSLQVPSPKPWGAANIVPKEQPEPKEKRDRRHKVEPETKSDKPLEERGQ
AFEIFKKTDLPSVGENHKLPTVVQTSIQAPKPVHQLAAEVFSTSILPQDPIQRKQKLQDL
MAQMQGTYNFMQESLLDYDRSAQSTMPTSQQPFASTPMEQTQQKSMDYLPQPAQLFTEPK
SKCVSSKPLHEPNSALPTIDETLSGSEANLSQSPAIQVESPLPPAEELENCISPKREYKA
STQLAESPVEKESIIQATVPLLSESPITTSSSSMSPISKEKAFKCSATRSSTAISTTPFQ
TMQTIFKVNAPLSFHKDSDPKDEPAYPTSYNQTFATSSTQTLPHYVPQPNNEQNSVSHEI
VSAASTGQPEGNVPVNSNAASYPVQTAYLRASQPFNNRGLVRGASRGTRANSYRPLSGFK
AGFDSYRGGPPAVLNGNFAQPQFSGREYSAIPYTLRDGNYQACYKRGASCGPRGNSRAGW
SDSSQLSSPERDEIFHSGDSGQGDSRSNTPVDMPVTNQAATLLPVHVYPLPQQMRVAFST
ARTSNFAPGTLDQPIAFDLLLNNLGETFDIQLGRFTCPVNGTYVFIFHMLKLAVNVPLYV
NLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGY
LLYQD
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgctctactcgtacttctatctagctccatccgtgtcaatggtgcagctttctccatct
cctttccgtcgcctttcgccttcaggctgctcatcggagaaaggtatgaagccagccaaa
gagcagaccggggagagccagcatgtcctcacccccctgcagactcctctctcctcggcc
tccacccctttccaggcgtacgagacctacgttgacaatgggatgatctgcctgaaacac
aaaatcaggaacatcgaaaaaaagaagatgaaactagatgattacaaacagcggatgcaa
aatggagaaagtcttaatcaggaccagctggaggcagtggaaaaatatgatgaagtgata
cataatctagagtttgccaaggaacttcagaaaacatttactgcccttggccaagagttg
ctgaaagcccaaaagaaggctctgagacgagaagctattctgaaaattgagcttgataag
aagaaactacgaacaattttccatgcccaatatgtgcttaaaaacttacgccaggaacat
gtgcagaaagactttagagaaggctgcaatggtgcatcctacctgtcttctaaagaactt
gactacctaattaagttctcaaaactaacctgtcctgagagaaagaaaagcatgagtctt
gaagatcaaatggagcaaactgcattctatttctgggatctcttagaaggcagtgagaag
gctgtagctggtaccacttataaagtggtgaagaatttgctgagcatgatgttagatggt
ggctactttgaaagcattccagtacctcccattgtaaagaagaatcaggtgatggaggta
ctgaagaggccagagaagcatgtggtagaggaagaaatactgaaaaaaccagaaattgaa
ccatttccaaaagtagagcctgccaaagaaccagagcctcctaaggtgcttgcacagtcc
attgacaaacacccatgtgagttcttgaacagaagatatttgcttgaaactgagcaacat
aaaaatgcagaagaaccaaaaccctgggatgctggattcattagaaagcaacagtctcca
aagcctttggaagtacatactgaaaaggagcaattgtcattgcaggtgccttctccaaag
ccttggggagctgcaaacatagttcctaaggagcagcccgagcccaaagagaaacgagat
cggagacacaaggttgaaccagaaacaaaaagtgataaaccactggaagaaagaggacaa
gcctttgaaatattcaagaaaacagacttgccatcagttggagaaaaccacaaactacct
acagtagttcaaaccagcattcaggcacccaagccagtacatcaactagctgcagaggtt
ttttccacttccattcttccccaagaccctatacaaagaaaacaaaaacttcaggatctg
atggctcagatgcagggaacttacaacttcatgcaagagtctctgctagattatgaccgt
tcagctcaaagtaccatgcctacatcacaacaaccttttgcaagcactcccatggaacaa
acacagcaaaagtcaatggactatctcccacagcctgcacagctcttcacagaaccgaaa
agtaaatgtgtttcttccaagccattacatgagccaaactctgccttacctactattgat
gagaccttgtctggatcagaagcaaatctttcccagtcaccagctatacaggtagagagt
cctttaccacctgctgaagagcttgaaaattgcatttcacctaaacgagaatataaagca
agcacacaacttgctgagtccccggtagagaaagaaagtataatacaggcaactgttccc
ttgctgagtgagtctcctataacaacctcaagttcttccatgtcaccaatatctaaggaa
aaagcttttaagtgttcagctaccagaagctcaacagctataagtacaactccctttcaa
acaatgcagactatattcaaggtgaatgctccactgtcttttcataaagattctgatcca
aaagatgaacctgcataccctacaagctacaatcaaacgtttgctacaagcagtactcaa
acactacctcattatgtaccacagcctaataatgagcaaaattctgtgtctcatgagatt
gtatcagcagccagtactggtcagcctgagggaaatgttcctgtgaacagcaatgctgcc
tcttatccagtacaaactgcttacctcagagcttcccaaccatttaacaatcgtggcttg
gttagaggagcttctcgaggtacaagagccaattcgtatcgaccactcagtggatttaaa
gcaggctttgatagctacagaggaggaccacctgctgtccttaatggaaactttgcacag
cctcagttctctgggagagaatactctgcaatcccttacacactcagggatggtaactat
caagcatgctataaaagaggagcatcttgtgggcctcgaggaaattcgagagcagggtgg
agtgattcgtctcagttgagcagcccagaaagagatgaaatttttcacagtggagactct
ggtcagggagactctcgcagcaatactcctgttgatatgccagtgaccaaccaagctgct
acccttttgccagttcatgtttatccccttcctcaacagatgcgagtagccttttctact
gctagaacatctaactttgctcctggaactttggatcagccaattgcatttgatcttcta
ctgaataatcttggagaaacttttgacattcagcttggcagatttacctgtccagtaaat
ggcacgtatgtcttcatttttcatatgctgaaactagctgtgaatgtgccattgtatgtc
aacctaatgaaaaatgaagaagtcctagtatcagcatatgcaaatgatggggcaccagat
catgaaactgctagtaatcatgcaattcttcagctgtttcaaggagaccaaatatggtta
cgtttacatcgaggagctatttatggaagcagttggaaatattccactttctcaggatac
ctcctttaccaggattga
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