Geotrypetes seraphini (Gaboon caecilian): 117363972
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Entry
117363972 CDS
T09159
Name
(RefSeq) sodium- and chloride-dependent betaine transporter-like isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117363972
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsh02000
]
117363972
Transporters [BR:
gsh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117363972
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117363972
NCBI-ProteinID:
XP_033808525
UniProt:
A0A6P8RSH1
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Position
7:complement(42311994..42520573)
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AA seq
617 aa
AA seq
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MDGKMHLEDSNVVFQPEHLKNERGNETREKLEERGQWNNKVEFVLSVAGEIIGLGNVWRF
PYLCYKNGGGAFFIPYLIFLFTCGIPVFFLETSLGQYTGQGGVTAWRKICPVFEGIGYAS
KVIESYLNIYYIVILAWALFYLFSSFAAELPWAHCNHTWNTENCVEFAEESNWTLSVNPN
ATSPVIEFWENRVLGITDGIHNLGTVRWELALCLLLAWVICYFCIWKGVKSTGKVVYFTA
TFPYLMLIILLVRGVTLPGAHEGIIFYLKPDISRLADPQVWMDAGTQIFFSYVLCQGCLT
AMGSYNKYNNNCYRDSIALCFLNSITSFIAGFAIFSVLGFMAREQGVPISQVAESGPGLA
FIAYPKAVTMMPVSQLWSCLFFLMLIFLGLDSQFVCVESQVTAIVDMFPAVFRKRFRREL
LILGIAVVCYLIGLLLVTEGGMYIFQLFDYYAGSGTCLLFVAIFEAICIGWAYGGNRYYD
NVEDMIGYRPWPLVKLCWQVVTPAVCLGTFLFSLIKYTPLKYNNKYVYPSWGYAVGWLMA
LSSMIFIPLYAIYYFFRTEGPLSKRLQQLIAPAEDLPQPKKYLPNFGQQWNSSDLGFRPP
PFSAKEGLMPLDIETHF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggacggtaagatgcatttggaggactccaatgtagttttccaacctgaacatttaaag
aatgaaagagggaatgaaactcgagaaaaactggaagaaagaggacagtggaacaacaaa
gtggagtttgttctctcagttgctggagagattattggtctgggaaatgtttggcgattc
ccatatctttgctacaaaaatgggggtggtgctttctttattccataccttatttttctc
ttcacctgtgggattccagtatttttcttagagacatcacttggacagtacactggccaa
ggaggagtcactgcatggcggaaaatttgtcctgtctttgaaggaattggatatgcctcc
aaagtaatagaatcctacctgaacatctattacatcgtaatcttggcatgggcccttttc
tacttgttcagctcctttgctgcagagctcccgtgggcccattgcaatcacacctggaac
acagaaaattgtgtggaatttgcggaagaatctaattggaccttgtcagtgaatcccaat
gctacttcccccgtcattgaattttgggaaaatcgagtcctgggaatcacagatggtatt
cacaatctgggcactgtaagatgggaattggctttgtgtctccttctggcctgggttatc
tgttacttctgtatctggaaaggagtcaaatccacaggcaaggttgtctatttcacagcc
accttcccttatttgatgctaattatcctgctggtccgaggggtcacattgcctggcgcc
catgaaggaataatattctacctgaaacctgacatatcaaggcttgcagatccacaggtt
tggatggatgcgggcactcagatctttttctcctatgttctttgtcaggggtgcttgacg
gcaatgggcagctataacaagtacaataacaactgttacagggactccattgcactctgc
ttcctgaacagcattacaagcttcattgctggctttgccatcttctctgtgctgggtttc
atggctcgtgagcagggtgtacccatttcacaggtggctgaatcaggaccaggtttggca
ttcattgcatatccgaaggctgtgactatgatgccggtgtctcagctctggtcatgcctc
ttcttccttatgttgatcttcctgggactagacagccagtttgtctgtgtagagagccag
gtgacagctattgttgatatgttcccagctgtgtttcgcaagcgttttcgacgggagctg
ctgattttggggattgcagttgtgtgctatctgattggactacttttagtcactgagggt
ggaatgtatatcttccagctctttgactattatgctggcagtggaacatgcctgcttttt
gtcgccatttttgaagctatctgcatcggctgggcatatggtggaaatcgttactatgat
aatgttgaggacatgattggctaccggccctggccactggttaaactttgctggcaagtt
gtcacaccagctgtttgtttgggaacatttctgttttcactgattaagtacacacccctt
aaatataacaacaagtatgtctacccttcctggggttatgctgttggctggcttatggca
ctctcatcaatgatcttcattcctttgtatgccatctactactttttcagaactgaagga
ccattgtcaaagcgattgcaacaacttattgctccagcagaagacttaccacagccaaag
aagtatctacctaactttggacagcaatggaacagctcagatctggggtttaggccccca
cccttttcagctaaggaggggctcatgcccttagacatagaaactcacttctaa
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