Geotrypetes seraphini (Gaboon caecilian): 117364056
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Entry
117364056 CDS
T09159
Symbol
UBR1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117364056 (UBR1)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117364056 (UBR1)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
117364056 (UBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
Motif
Other DBs
NCBI-GeneID:
117364056
NCBI-ProteinID:
XP_033808724
UniProt:
A0A6P8RT84
LinkDB
All DBs
Position
7:complement(113449476..113981396)
Genome browser
AA seq
1751 aa
AA seq
DB search
MADEGDSRDGVENSGAPVNLQSMAMWSDERIDFHTAFYQHLAKFVPGIYHDEMHPVAEKE
EEVAQMLIFTPLEWYLFREDPAICLEKIQQCGTPQLCGKVFKGGETTYSCRDCAIDPTCV
FCMDCFQSSIHKNHRYKMHTSAGGGFCDCGDTEAWKTGPLCKIHEPATGIATKGCHLSEE
IIAQARKVFPSVIKYIVDMTIWEEEMDLPLGLQTSTEKTDSYYCVLFNDEHHSYDHVIYS
LQRSLACDVREAQSHTVAIDKEGRRAVKGGNFMDCQEVEDDIKAHSENVSLRQLHTEVLH
TDVMGHQKFALRFGCWLNKLMSYSSDFRQIFCQACLKQEAGSDEPCPISRLMLWDAKLYK
GARKIVHELIFSSFFMEMEYKKLFAMEFVKYYKQLQKEYIDDDHDRSISVTAFSVQMFTV
PTLARHLIEEQSVLTVIAETLLEVLPEYLDGNNKFNFQGYSQDKLGRINAVISDLKYILI
TRPTTWTDILRSRFLEGFRSFLKILSCMQGMEEIKRQVGQHIEVDPDWEAAIAIQMQLKN
ILVMFQEWCASDEEVLLRAYKECHKAVIQCSTNTSSRGKVLLQMCGYSLEDRPYLVSADP
VSIHLPLTRTLAGLHAHLSRTGIFSRLHEFVTPEEFQIDLLIEYPLRCLVLVAQVSAEMW
RRNGLSLISQVFYYQDVKCREEMFDKDILMLQIGASQMDPNNFLLLLLQRFELYDIFKRI
IPTKNMNLTKQRNTLIEEMLQILIYVVGERYVPGLTHVTKEDIIMREIIQLLCIEPMAHS
SIAKCLPENENNDTGLDKVINKIAIFKKPGVSGHGVYELREQYQKQFNMFFYHYSKTQHS
KAEHMQKKKRKQENSDEALPPPPPPEFMPAFSNVVNLLHCDIMMHIHRIILQRAIELDSS
SWTEGMIQMVLHLIAFGLLEEKQQLQKASEEDVTFDFYHKASRAGSSSPNAMSILMLLEK
MKSIPQLDAQKDMVSWIQQMFDTVKHLREKSSVTVVATASGTEVMKGDEVQNTQDKEKRK
RKAEAARLHRQKIMAQMSALQRNFIESHKLLYETTGETQERVSTTAEEENTPVAIDYSRI
ALGPKRDPFIPKKEVLTCILCQEEQEVRVDADAMVLTACVQKSTALTQNRGKSIVHSGET
FDPHFMDPDLICGTHTGSCGHVMHAACWQKYFEAMNVNSRHRLHVELIFDLENGEYLCPL
CKSLCNTVIPIIPLQAQQINNEDADTVSQLLTMSHWLEVVMARILGCSVKNMTGENQQYP
VLTDEETRDSSVDFHSILSYGVQPSIRYSKSIKEMLILFATTSYRVGLKVPPNEADPRVP
VMSWSTCSFTIQSIENLLADAEKPLFGSLQNRQSSGLKALVKFAAAQRITSPQSLIQKHL
IRFLAVLLPSIKIEDTPSLLSIDIFHILVGVILAFPSLYWEDTVELEPSTISSSYNNLYL
FHLLTMAHIVQILISSATDCPPAQVQDESEESSSAAALCKEVSQYTSGCLRQDIPGWYLW
DCVKKGIIPYLRCAALFFHYLLGVTPPEELQSSSQERHFKALCTYLSLPTNLFLLFQEYW
DSVNPMLQRWCSDSAVLNFLKGKSNSLRYPRKRNTLIELPEDYSCLLNQASQFRCPRSSD
DEQKHPVLCLFCGAMLCSQNTCCQETVNGEELGACTVHSLHCGAGVCMFLKIRECKVVLV
EGKTRGCLYPAPYLDEYGETDPGLKRGNPLHLSHERYRKLHQLWQQHCIIEEIARSQEIN
QIFFGINWQLL
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaaggggatagtagggatggagtggagaacagtggtgctcccgtcaacctg
cagtctatggctatgtggtctgatgaaaggatagattttcatacagcattttaccaacac
ttggcaaaatttgtgccaggtatttaccatgatgaaatgcatcctgtggcagagaaagaa
gaagaggtggctcagatgctgattttcacccctttggaatggtacctatttagagaggac
cctgctatctgtttggagaagatacagcagtgtggaacaccccagctttgtggaaaagtt
ttcaaaggtggtgagacaacttactcttgcagggactgtgcaatagatccaacatgtgtc
ttttgtatggactgtttccagagcagcattcacaagaaccaccgctacaagatgcatact
tctgctggaggaggtttctgtgattgtggggacacagaagcttggaagacaggaccattg
tgtaaaatccatgagcctgccactggaatagctacaaaagggtgtcatctcagtgaagaa
attatagcccaggccagaaaggtgtttccatctgtgataaagtacattgtggatatgaca
atttgggaagaggagatggatcttcctttaggactccagaccagtactgagaagacagac
agttactactgtgtcctgttcaatgatgagcatcattcttatgatcatgtgatctacagt
cttcagaggtcattggcttgtgatgtgagagaagctcagtcacataccgtagcaatagat
aaagagggacggagggctgttaaaggaggtaactttatggattgtcaagaagtggaagat
gacatcaaggctcattcagagaatgtgtctttacgccagcttcatactgaggtattgcat
acagatgttatgggtcatcagaaatttgcattacggtttggttgctggttgaacaagcta
atgagttattcaagtgacttccgccagatcttctgtcaagcttgcctcaaacaagaggct
ggttctgatgagccctgtcccatcagtaggttaatgctttgggatgcaaagctttataaa
ggagctcgaaagattgtacacgaactgatcttcagtagctttttcatggaaatggaatac
aagaagctatttgctatggaatttgtaaagtattataagcaactgcagaaagaatatatt
gatgatgaccatgatagaagtatctctgttactgctttctctgttcagatgtttaccgtt
cctacattggcccgccatctcattgaagaacagagtgtcctaactgtcattgctgagaca
ctgcttgaagtgcttccagagtacctggatgggaacaacaagttcaactttcaaggttac
agccaggacaagctgggcaggataaatgcagtcatctctgacctcaagtatattttaata
accagacctactacgtggacagatatattgaggtcccggtttttagaagggtttcgttct
ttcctgaagattctgtcctgcatgcagggtatggaggaaataaaaagacaagttggtcag
cacattgaggtggatcctgattgggaagcagccattgcaatccaaatgcagctaaaaaac
attcttgtgatgttccaagagtggtgtgccagtgatgaagaagtgctgctgagagcttac
aaagaatgccataaagcagtaattcagtgtagcaccaatacttcttcaagaggaaaggta
ttacttcagatgtgtggctattctctagaggaccgaccttaccttgtgtctgcggatcca
gtcagcatacatttgccactcaccagaacacttgctggtctacatgcacatcttagcagg
actggtattttctcaaggctacatgaatttgtcacacctgaggaatttcaaatagatctg
ctgattgaatatcccctgcgctgtctggtgttagttgcccaggtatctgcggagatgtgg
agaagaaatggactatctctaataagccaggtcttttattaccaagatgtaaaatgcagg
gaggagatgtttgataaagatatcctaatgctgcagattggtgcttcccagatggatcca
aacaacttcctgttgctgctgctccaaagatttgaactttatgacatctttaagaggata
atacctaccaaaaacatgaatttgacaaaacaacgcaacacattaatagaagagatgctg
cagattttaatttatgttgtgggagagagatatgtgcctggcttgactcatgtgaccaag
gaggatattatcatgagagagataatccagcttctttgcattgagccaatggctcatagt
agcattgcaaaatgtttgcctgagaatgaaaacaatgatactggattggacaaggttatc
aataaaatagccatattcaagaagccaggtgtgtctggccatggagtttatgagctgagg
gagcaataccagaagcagtttaatatgtttttttatcactactcgaagacacagcacagc
aaggctgaacatatgcagaagaagaaaagaaagcaggagaacagtgatgaagcactccca
cctccaccaccacctgaattcatgcctgctttcagcaatgtagtgaacctcctacactgt
gatatcatgatgcatatccaccgaatcatcttgcaaagggcaatagagttggactcctct
tcatggactgaaggcatgatccagatggtgcttcatcttattgcttttggtttacttgaa
gagaagcaacaactgcagaaagcttctgaggaagatgtgacttttgatttttatcataag
gcatcgagagcaggaagttcatcaccaaatgctatgagcatattgatgcttctggaaaaa
atgaagagtattccacaactggatgcacaaaaggacatggtcagctggatacagcagatg
tttgatacagtgaaacatttaagagagaaatccagtgtaacagtagtagccactgcatca
ggaactgaggtcatgaaaggagatgaggtacagaatacccaagacaaggagaaaaggaaa
aggaaagctgaggcagccagactacaccgacagaagatcatggcccagatgtcagcacta
caaagaaattttattgaaagtcataaattactttatgagactacaggagagactcaggaa
agagtcagtaccacagctgaagaagaaaatacacctgtggctatagattactcaaggata
gccttgggacccaagcgagatccatttatccctaaaaaagaagtcttgacttgcatcttg
tgtcaggaggaacaggaagtgagagtggatgctgatgctatggtcctgacagcctgcgtt
cagaaatcaactgctttaacccagaacagagggaaatctattgtgcactcaggtgaaaca
tttgatcctcatttcatggatcctgacttgatctgtgggacccacacaggtagctgtggt
catgtgatgcatgcagcttgttggcagaaatattttgaagcgatgaatgtaaattctcgc
catcgcctgcatgtggaacttatttttgacctggagaatggagagtacctctgcccactc
tgcaagtctctgtgcaatactgtgattcccatcattccactgcaagcacaacagataaat
aatgaggatgcagacactgtatctcaacttttgactatgtctcactggttagaagttgtg
atggcaaggattttgggctgtagtgtaaaaaatatgacaggtgaaaatcagcaatatcca
gttttaactgatgaggaaaccagagattcttctgtggattttcactccatactaagctat
ggtgtacagccctctatcagatattctaagagtattaaggaaatgctgattctctttgcc
accacatcttatcgtgttggattgaaagttcctcccaatgaagcagatcctcgtgttcct
gtgatgtcctggagtacctgttcttttaccattcagtctatagaaaacctgctagcagat
gccgaaaaacctttatttggatctctgcaaaatagacagagcagtggccttaaagcatta
gtaaagtttgcagcagctcagaggattacatcaccacaaagcctaattcagaaacatctg
atccgtttcctggcagttttactgccaagcataaaaatagaagatactccctctcttctg
tctatagatatctttcatattttggtgggtgttatattagcttttccttctctgtactgg
gaggacacagtagaactagagccctctaccatcagctcttcctataataatctttacctt
ttccatttgctcaccatggctcacattgtacagattcttatcagttctgccacagactgc
cctcctgctcaggtacaagatgaaagtgaggagtctagctcagctgcagctctttgtaaa
gaagtgtcccagtataccagcggctgcttaaggcaggatatcccaggctggtatctatgg
gactgtgtgaagaaggggataataccttacctccgctgtgctgctttatttttccattat
ttgctgggcgtgacacctcctgaagagctgcagtcttcttcacaagaaagacacttcaag
gcactttgtacttacctgtcactgcctacaaatctgttcctgcttttccaggagtactgg
gactctgttaaccctatgctccaaaggtggtgctctgattctgctgtgctgaattttctg
aaggggaaaagcaactcactcaggtatcctaggaaaagaaatactttaattgaactccct
gaagactacagttgtctcctaaatcaagcctctcaattcagatgtcccaggtcatcagat
gatgaacaaaagcatcctgtgctttgcttattttgtggggcaatgctgtgctcccagaat
acttgctgccaagagactgtgaatggggaagagctgggagcctgcactgttcattctctc
cattgtggcgcaggagtatgcatgttcctcaaaatcagggaatgtaaagtggtactggta
gaaggtaaaacacgaggttgcttgtatcctgcaccataccttgatgagtatggtgaaaca
gaccctggcctgaagagaggcaatcccctacacctatctcacgagcggtaccgaaagctc
caccagctatggcaacagcactgcatcatagaggagattgccagaagccaggaaatcaac
caaatcttttttggaataaactggcaacttctatga
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integrated database retrieval system
