Geotrypetes seraphini (Gaboon caecilian): 117364079
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Entry
117364079 CDS
T09159
Symbol
BRF1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117364079 (BRF1)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
117364079 (BRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
RB_B
Motif
Other DBs
NCBI-GeneID:
117364079
NCBI-ProteinID:
XP_033808776
UniProt:
A0A6P8RVJ5
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All DBs
Position
7:150863949..151224160
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AA seq
679 aa
AA seq
DB search
MSGRACKTCGCTDIDIDQARGDAVCTGCGSVLEDNIIVSEVQFVESGGGGSSAVGQFVSL
DCSGKTPSLGGGFHTSLGKESRAQTLQNGKRQIHNLGVQLQLNQHCLDTAFNFFKMAVSK
HLTRGRKMSHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAPA
IDPCLYIPRFAHMLEFGDKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
DFRRTVKEVIRVVKVCESTLRKRLTEFEDTPTSQLTIDEFMRIDLEEECDPPSFTAGQKK
LRLYQLEQQLAKKLDDFEGEITNYQDEIELELENSRPKPKGFYAAYTKDDSLDNTSSIFG
EEEAEDEELEAAANHLNKDLYNELLKRQRLNGGEKNEFRNGSVPSIKPPALESLLGPLPT
AASLGITESIKECISTKEHGNDYSAEDGELDLNGIDDTEIERYILNEKEAEIKATLWMKE
NADYLKEQKEKEERIAKEKELGIYKEQKPRKSSKKREPIRASTAGEAIEKMLEQKKISSK
INYDVLRDLNSKGCSTPKQEDDSLEESSSTKKLSRRKSVANRNITSPVSSMGKRLRPLIS
TQPAKKIAVDQQVILPNQLLSVPEPAKPSTVLIESGPVTYNHEDDVEEEEEEEDEHCVSA
LQLMGGNDYGCDLDDDDGY
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccgggcctgtaagacctgcggttgcacggacattgatatcgaccaggctcgc
ggcgatgcggtgtgcacgggctgtggctccgtcctggaggacaacatcatcgtgtccgaa
gtgcagtttgttgaaagcggtggtggaggctcgtctgctgtcggccagtttgtgtctttg
gattgctctggtaagacaccttcacttggaggaggatttcataccagtttgggaaaggaa
tctcgggcacagactctccaaaatgggaaacgtcaaattcacaatttgggagtccagttg
caactgaaccaacattgtcttgatactgcctttaattttttcaagatggcagtgagcaag
catctcacccgtggaagaaagatgagccatgtaattgctgcctgtctttatttggtttgt
agaacagaaggaactcctcacatgctacttgaccttagtgaccttcttcaggtgaatgtc
tatgtactgggaaaaaccttccttctcttggccagggagctctgcataaatgctccagct
atagatccttgtttgtatattcctcgatttgcacatatgttagaatttggggataagaac
catgaagtgtcaatgacggctctaagattgttacagaggatgaagagagactggatgcac
acaggacgccggccctcaggactttgtggtgcagcccttctagttgcagccagaatgcat
gatttccggcgcactgttaaggaagtcatcagagttgtgaaggtttgtgaatcaacacta
agaaaaagacttacagagtttgaagatacaccaacaagtcagttaaccatagatgagttt
atgaggatagatttggaagaagaatgtgatcctccatctttcacagctggtcagaagaag
cttcggctgtaccagcttgaacaacagttggcaaaaaaactggatgattttgaaggtgaa
ataacaaattatcaagatgaaatagagctagagttggaaaatagcagaccaaagccaaaa
ggattctatgcagcatatacaaaggatgattctttagataatacttccagtatatttgga
gaagaagaagcagaggatgaagaacttgaagcagctgctaatcacctcaacaaggatctt
tacaatgaacttctgaaaagacagagattaaatggaggtgaaaagaatgaattcagaaat
ggaagtgtaccttcaatcaaaccacctgcattagaatccttgcttggtcccctccctact
gctgcaagccttgggataacagaatctataaaagagtgtatatccacaaaagagcacgga
aatgattatagtgctgaagatggcgaattagatcttaatggaatagatgacactgaaata
gagaggtacattctgaatgaaaaagaagctgaaataaaagccacattgtggatgaaggaa
aatgctgactatttgaaggaacaaaaggaaaaagaagaaaggatagcaaaagaaaaagag
cttgggatttataaagaacaaaagccaaggaaatcttcaaaaaaacgagagccaattcgg
gccagcactgcaggagaagccattgaaaagatgctggaacagaagaaaatctccagtaaa
ataaattacgatgtgctacgggacttgaatagcaaaggatgtagcacaccaaagcaagaa
gatgacagtttggaagaaagcagcagtaccaagaaactgtcaagaagaaaatctgttgcc
aacagaaatataaccagccctgtcagcagcatgggcaaaaggttaaggcctctgatttct
acacagccagctaaaaagattgcagtggaccagcaggttatccttccaaatcagcttttg
tctgtaccggaacctgccaagccgtcgacagtgctgattgagagtggaccagtaacttac
aatcatgaagatgatgtggaggaggaggaggaggaggaagatgagcactgtgtgagtgca
cttcagttgatgggaggaaatgattatggctgcgatctggatgatgacgatggctactag
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