Geotrypetes seraphini (Gaboon caecilian): 117364249
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Entry
117364249 CDS
T09159
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin
KO
K06548
sialoadhesin
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117364249 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gsh04090
]
117364249 (SIGLEC1)
04091 Lectins [BR:
gsh04091
]
117364249 (SIGLEC1)
CD molecules [BR:
gsh04090
]
Proteins
117364249 (SIGLEC1)
Lectins [BR:
gsh04091
]
I-type lectins (Siglecs)
117364249 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
Ig_4
Ig_5
Izumo-Ig
Ig_CD22
Ig_6
C2-set
C1-set
Receptor_2B4
Ribosomal_bL9m_C
Motif
Other DBs
NCBI-GeneID:
117364249
NCBI-ProteinID:
XP_033809159
UniProt:
A0A6P8RUH0
LinkDB
All DBs
Position
1:288494725..288609124
Genome browser
AA seq
1690 aa
AA seq
DB search
MKTLQLCLLAALVTQGLGSSWDVFYPESLQTMQGSCLFIPCTFIFPSDVSSSNGITAIWF
KEVDGQRLVVYHSASNEAADTFKGRAELLGNPIDKNCTLLLKNIKQEDAGKYLFRYEIND
VHRWLDMKGVRVSVTNEVERPEVNFPVDMSEGTPQTLSCSTRYVCPFDNMALEWKGYARE
RSLTSGRVQLDTTVAVSQLNLTTTFLWQDNLKKLSCDLTVGTHRVQKDIVLNIKHSPKDT
KVLLNPSRQNIKEGDSISLTCDVNSSNPEVIVYKWYKNGKVFYEKQLLSFPSITRTDYGE
YSCEVKNAIGVGLSPVITLNIFSAKLVVTPSSVIQEGKEVTLTCNVPSKASEDIIYKWYK
NNIWIKEGPAKSLVFQKVLSSDAGYYYCIIQNNMGSDTSPSIVLNVLYPPRTPVMTSFLE
TQEGKLAIIHCMVGSIPVSELTLYRNDKLIATTSSHGAPSQRLSISSSRNSLKLEIKDVI
LDDEGKYVCRATNEYGTSEISKNFAVEAARVLVAPSTELHEGDMVTMTCITARKMQEEPL
YIWYKDTKWLRESSENSLVFHAVGRGDAGSYYCRAQDREGSDVSPASMLHVLYPPRKPMM
TSMLETQDGQWATIQCTVDSEPSSEIALLRGDKLVASTNSHIPSSQRHFVSSSYNSLKLE
IRDIVLEDEGVYTCLTNNTYGNATSSIEFTAETARLVITPSTGIHEGETVNLTCTISTDS
KAGTNYTWYKNGESFSESSSASLVFQHVASTDAGSYHCKVSNSEGSKHSASVSLNVWYPP
RNLLMKSFLETEEGKLAIIYCSVDSNPLSTMTLSKSNVSVAVTSVHGAESSHRLTLSSSR
NALKLEIKNVRLEDGGHYVCSATNTEGTSSDSLYFRVQTARVLVTPSTEVLEGDEVTLSC
DITRNTKEGIRYSWYKNSKWLEDNVESSLIFQEISSHDTGYYHCNAQDNEGSSTSPSVSL
HVFYAPREPVMTSFLETQGRRRGIIQCTVDSDPTSKIALYKDDELIVSTRSDNVANQRLL
VSSSSYNSLKLEIKDVVLEDEGVYVCLARNTYGNANSSVDFTAESAKILVTPSAVIPEGD
RVNLTCDISSKAQGMLNYTWYKNGNIFMEGSKTKKTLLFLRIESGDAGSYHCSVQSEEGS
KSSSPVTVSVLYPPRNQQLKSFLDTEDEKLAIFLCTVESNPPSELTMYKKGKVIASTSIF
AAPSQRLSIFHTHNTLKLDIRNVMLDDEGNYTCLAKNAHGNSSAFVHFTAKSARVVMNPA
TGLREGDAVTLTCIDMRSTYPATGYTWYKNTKWFQQGSASSLVFHKVTSSDAGSYSCKAQ
SSDGDRNSAPVTLHVFYAPRTPLMTSFLEPQERQRGIIECTVDSDPPSEISLYRNDKLLV
SNSFPSSDTEQLKISVSHNSLKVDIKNIRLEEQGIYGCTAKNLYGTANTSLHFFVQAVEI
LVAPSTEIHEGNNVNLTCLVTGKIHGKVNYIWYKNSRWLKEAPAGSLLLESVNNTDTGSY
HCAAKDTRGNQTSSLISLNVLFAPRSLRMTSYVETQGGQLGIILCTVDSEPSSKLTLSQN
NVIVASTNSHRAWNQRFSMSSSYNSLQLEIREIRPEDSAEYVCTAKNMLGTTMSSLFFRA
HAVREGQNYKIIAWIVIVAALALIIFTIFVGVKFWKKRTGLCKLKTNENAVEMLSTNEQL
QDENTSLAEN
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacattacaactttgtctcctggcagcactagttactcaaggtttggggtcttcc
tgggatgtattctatccagaaagtctacagactatgcaaggctcttgtcttttcatccct
tgtacattcatcttcccaagtgatgtaagttcatccaatggcatcactgccatctggttc
aaggaagtggacggccaaagacttgttgtgtaccactctgcctccaacgaagctgcagac
acttttaaaggtcgtgccgaactcctgggtaaccccattgataagaactgtaccctgctt
ttaaaaaatattaaacaggaggatgctgggaaatatctatttaggtatgaaataaatgac
gtgcatcgttggctggatatgaaaggtgtcagggtcagtgttacaaatgaggtagaaagg
ccagaggtaaattttccagtggatatgtcagaaggaactccacaaacattaagttgctct
acacgatatgtttgtccattcgataacatggctctggaatggaagggctatgctcgtgag
aggtctctcacttcaggaagagtgcaactagatacaacagttgctgtcagtcaacttaat
ctaacaactacatttttatggcaagataatttaaagaaactcagctgtgatcttactgtt
ggcactcaccgggtacagaaagacatcgtattgaacattaaacattctcctaaagacaca
aaggttttactaaatccatccagacaaaacatcaaagagggtgatagtatatctttaact
tgtgatgttaacagcagtaaccctgaggtcattgtttataagtggtacaagaatggaaag
gttttctatgaaaaacaattgctatcatttccaagcatcactcgcactgattatggagaa
tactcctgtgaagtcaaaaatgcaataggagtcggtctgtcacccgttataaccctcaac
attttctctgcgaaacttgtggtgacgccatcttcagtgatacaggaaggaaaagaagtc
actttgacttgtaatgtacctagtaaagcatcagaggacatcatctataagtggtacaag
aataacatctggataaaagaaggtcctgcaaagtctcttgtgtttcagaaagtcctgagc
agtgacgctggctattactactgcataatacagaacaatatgggcagtgatacttcccca
tcaattgttctgaatgtgctctatcctccaaggactccagtgatgacctcatttctggag
actcaggaaggcaagttggccatcattcactgcatggttggtagcatccctgtttcggaa
ctaaccctttacaggaatgataaacttattgcaaccaccagctcacatggagcaccctcc
caaaggttaagcatttcttcctcacgtaactccttgaaactggagataaaagatgtcata
ttggatgatgaaggaaagtacgtttgcagagctacaaatgaatatggcacttctgagata
tctaagaattttgctgtggaggctgcaagagtcttggttgctccatcgacggaattacat
gaaggtgacatggttaccatgacttgtataactgctagaaagatgcaagaagagcctctt
tacatctggtacaaggataccaagtggctgagagaaagctcagaaaattctcttgtgttt
catgcggttggcagaggtgacgccggctcctattactgcagagcacaggatagagaagga
agtgacgtgtctccagccagcatgctgcatgtgctttatcctcccagaaagcctatgatg
acttcaatgctggagacacaagatggacagtgggctaccatccagtgtacagtggacagt
gaaccctcctcagagattgcccttttgagaggagacaagctggtggcttctactaattcc
cacattccttccagccagaggcactttgtgtcatcttcctataactcactaaaactggag
atcagggacattgtcttagaagatgaaggagtatacacatgtttaacaaataacacatat
gggaatgccacctcatctatagagtttactgcagagacggcaagacttgtgatcacccct
tcgacaggaatacatgaaggtgaaacagtgaatttgacctgcaccataagcactgactca
aaggctgggactaactacacctggtacaagaacggggaaagcttctcggagagttcttca
gcctcccttgtgtttcagcatgtcgccagtacggatgctggctcctaccactgcaaagtc
tcaaatagtgaaggaagcaaacattcagcctctgtctctctgaatgtgtggtatccccca
aggaatttgttgatgaaatcatttctagagacagaagaggggaagttagccatcatttac
tgctctgttgacagcaatccactatctacaatgaccctgagcaaaagcaatgtatcagtg
gctgtcaccagtgtccatggtgctgaatccagccacaggcttactctgtcttcttcccgc
aatgccttgaaacttgagatcaagaatgtcaggttggaagatggaggacattatgtttgc
tctgccaccaacaccgaggggacatcgtcagattctttgtatttccgtgtgcagactgcc
agagttctagtcaccccatctacagaggtacttgaaggagatgaagttaccctatcctgt
gacatcactagaaacacaaaagaagggatccgttacagctggtacaaaaacagtaaatgg
cttgaggacaatgttgaaagttccctcatatttcaggagataagcagccatgatactggt
tattatcactgcaatgcgcaggataatgaggggagcagtacctctccatcagtcagcctg
cacgtattttatgccccaagagaacctgtgatgacttcattcctagagacacagggcaga
cggcgaggtatcattcagtgcacagtggatagtgatcccacctcaaaaatagccttgtat
aaagatgatgagctgattgtgtccaccagatctgataatgtcgctaatcagaggctgctt
gtgtcgtcttcttcttataactccttgaaactggaaatcaaggatgttgtgttagaggat
gaaggagtgtatgtgtgtttagccagaaacacttatggcaatgctaattcctcagtagac
ttcacagctgaatctgctaaaattttagtcaccccatctgcagtcattcctgaaggcgac
agagtgaatttaacttgtgatatttccagtaaggcccaaggaatgcttaactatacctgg
tacaagaatgggaacatatttatggaaggctcaaagactaagaagaccctcctcttcctc
aggatagagagtggtgatgctggatcctaccactgcagtgtgcagagtgaggaaggaagc
aaaagttcttcacctgtcaccgtgagtgtactttatcccccaagaaatcaacagctaaaa
tcgtttctggacacagaagatgaaaagttagctattttcctctgcactgttgaaagtaat
cccccgtctgaattgaccatgtacaaaaaagggaaagtcatagcttctaccagcatcttt
gctgcaccgagccagaggttaagtattttccacacacacaacaccttgaaactggatatc
agaaatgtgatgctggacgatgaagggaattatacttgccttgctaagaatgcacatgga
aattcctcagcatttgtacacttcactgcaaaaagtgcaagagttgtgatgaatccagcc
accggcttacgggagggtgatgcagtcaccctcacctgcattgatatgagaagcacatat
cccgccactggttacacctggtataagaacacaaaatggtttcagcaaggctctgcaagt
tctcttgtgtttcataaagtgactagtagcgacgcaggctcctactcttgcaaggctcag
agtagtgatggggacaggaactctgccccagtcactttacatgtcttctatgcaccaaga
acacctttaatgacatcattcctagaaccacaagaaagacagaggggcataattgagtgc
actgtggacagtgatcctccttcagaaatatccttgtacagaaatgataaacttctggta
tccaacagttttcccagttcagacacggagcaattgaaaatttctgtttctcataattcc
ttgaaagtggacatcaaaaatattagattggaagaacaaggaatctatggctgtacagct
aaaaatctctatggcactgcaaacacttctttacacttctttgttcaagctgtggagatc
ctggttgcaccctcaacagaaattcatgaaggcaacaatgtaaatctaacttgtttggtc
accggtaaaatacacggaaaagtaaactacatctggtacaagaacagtaggtggcttaag
gaggctcctgcggggtcgttgctcttagaatcagtgaataacactgacactggatcatac
cactgtgcagcaaaggacaccaggggaaaccaaacctcctcattgatcagtttgaatgtg
ctttttgccccaagaagtttaaggatgacttcatatgtggagacccaaggaggacaactt
ggcatcattctgtgcactgtggacagcgaaccctcgtctaaactaaccctgtcccaaaac
aatgtgattgttgcttccacaaactcacatagagcatggaaccagaggttcagcatgtct
tcttcctataactccttgcaactcgagatcagggaaataagaccagaagattctgcagag
tatgtatgtacagctaaaaatatgttggggaccacaatgtcgtctctattctttcgtgcc
catgctgttcgagaaggccaaaattacaagataattgcctggattgtgattgtagctgca
ttggctctcatcatattcacaatttttgtgggagtcaagttttggaaaaaaagaacaggg
ctttgcaaattaaagacaaatgagaatgctgttgaaatgttatccacgaatgaacaattg
caggacgaaaataccagtttagccgaaaactga
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