Geotrypetes seraphini (Gaboon caecilian): 117364294
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Entry
117364294 CDS
T09159
Symbol
HCFC2
Name
(RefSeq) host cell factor 2 isoform X1
KO
K27390
host cell factor 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117364294 (HCFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117364294 (HCFC2)
03029 Mitochondrial biogenesis [BR:
gsh03029
]
117364294 (HCFC2)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
117364294 (HCFC2)
Mitochondrial biogenesis [BR:
gsh03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
117364294 (HCFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Kelch_2
Kelch_FKB95
NANM
Motif
Other DBs
NCBI-GeneID:
117364294
NCBI-ProteinID:
XP_033809244
UniProt:
A0A6P8RUP2
LinkDB
All DBs
Position
7:22979908..23134650
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AA seq
911 aa
AA seq
DB search
METRARSFPGSPRACPWRPESSALLPPFSGAPLHCGRGGWLWYLLGGGKMAAPSLLNWRR
VLSFSGPVPRSRHGHRAVAIRELMIIFGGGNEGIADELHVYNTATNQWFLPAVRGDIPPG
CAAHGFVCDGTRILVFGGMVEYGRYSSELYELQASRWLWKKLKPRLPSTGVPPCPRLGHS
LTLHGSKCYLFGGLANESEDSNNNVPRYLNDFYELELRPSSGVVGWNIPATKGPLPSPRE
SHTAVVYCKKDSGKPKLYIFGGMCGCRLGDFWELDIESMSWSRPETEGISPLPRSLHTAN
VIGNKMYVLGGWIPQALAGMESAAHDNEWKCTSSFSYLNLDTMEWISLLPESQDDKKNSV
PRPRAGHCAVAIGTRLYIWSGRDGYRKAWNSQVCCKDLWYLDTEKPPAPSQVQLVKATTH
SFHVKWEEVPTVEGYLLQLSLDLPSPTLSAAQTPVASELSSPSSQDSVTPVALLTAKQLQ
TLQESGVLTQNMHVNVLFPPGIRLDLQDQINSDTVLHTVQVPASTNSLVQNTTETQLTDM
KIISAEKQSDIGGFSESNAILLSPSVFHLKTLDSKISTNLGELHDLNLQTVIPEASASCM
VHNTQAMVTQQAIKTEPSRTYGALVKDETSVTTFSTKSEVVKSSSLFSTNVSSNQAVDPV
AQSPQITVMKTETQWYDVGIFKANCTLVTQFYLMPEERPNISIQILVSSAKKQTLPDSPP
VIFLTKNVKKNRTDPCGMPLEENADMPDYTLLKKQDLMPGSVYRFRVAAINGCGIGPFSK
ISEFKTCIPGFPGAPSAVKIIKNLDNIRLSWEPPSSPSGIILEYSVYLAIRTTQLPEENL
NQLTFMKVYCGLKTYCTVSTAQLASAHVDCTSRPAVVFRISAKNEKGYGPATQVRWLQDS
NKNRKEGKHTE
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggagacccgcgcccgcagcttccccggttcacctcgcgcgtgcccatggagacccgag
tcctcagctctcctccctcccttttctggcgccccattgcattgtgggaggggaggctgg
ctctggtatctgctcgggggcgggaagatggcggctcccagcctgctgaactggaggcgg
gttctatcgttcagcggcccggtgccccgctcccgccacgggcaccgagccgtggctatc
cgcgagctgatgatcatttttggcggcggcaacgagggcattgccgacgagctgcacgtg
tataacacagctaccaatcagtggttccttcctgctgtgaggggagatattcctccaggc
tgtgctgcccatgggtttgtttgtgatgggactcgaattctggtatttggaggaatggtg
gaatatgggcgatacagtagtgagctgtatgaattacaggcaagtcgttggctatggaag
aaactaaaaccccgccttccatccactggtgtgccaccttgtcctcgcctgggccatagc
ctcactttacatgggagcaagtgttatttatttggtggcttggcaaatgaaagtgaagat
tcaaacaacaatgttcccaggtatttgaacgatttctatgaactggagctacgacctagt
tcgggggttgtgggctggaacattccagcaactaagggaccactgccttcacctcgggag
tctcacacagctgtggtgtactgcaaaaaggattcagggaaaccaaagctgtatattttt
ggaggaatgtgtggttgcagacttggtgacttttgggaacttgacatagaaagtatgtct
tggtcaagaccagagaccgaggggatatctccgcttcctcgcagccttcatacagccaat
gttataggaaacaaaatgtatgttttaggtggctggattccacaggcattggctggtatg
gaaagtgcagcgcatgacaatgaatggaagtgcactagttcgttttcttacctaaatttg
gatactatggaatggattagtctactgcctgaatctcaggatgacaagaagaattcagtg
cccaggccgcgggctggccactgtgctgttgccattggcacccgtctgtatatctggagt
ggcagagatggttacagaaaagcctggaattctcaagtttgctgtaaggatctgtggtat
cttgatactgaaaagccgcccgctccctcacaggttcagctggtcaaggccacaacacat
tcttttcatgttaaatgggaggaagtacctacagttgaaggctatcttcttcagttgagc
ttggatttgccatctcccaccctttctgcagcacagactcctgtggcctctgaattgtca
tcaccatcgtcacaagacagtgttactccagttgctttgttaactgcaaaacaactgcag
acgttacaagaaagtggtgttctgacacagaatatgcatgtgaatgtcctttttcccccg
ggaattaggctagacctacaggaccaaatcaactcagatactgttctccacacagtgcaa
gttcctgcttcaacaaattccttagtacaaaataccacagaaactcaactcacggacatg
aaaataatctctgcagaaaaacaatctgatataggaggattcagtgagtcaaatgccata
ctcctttcgccttcagtttttcaccttaaaaccttagattctaaaatatcaacaaattta
ggggaattacatgacttgaacctacaaactgtgatccccgaagcttctgcatcctgtatg
gtccacaacacacaagctatggtaacccagcaggccattaaaactgaaccatcacgtaca
tacggggcacttgttaaagatgaaacgtcagtaacaacattcagtacaaaatctgaagtt
gtcaaatcttccagtttgttttcaaccaatgtcagcagtaatcaagcagtggatccagtt
gctcagtcaccacagatcacagtaatgaagactgagacacagtggtatgatgtaggaatt
tttaaagcgaactgtacactagtgactcagttctatctaatgccagaagagagacccaac
atatccatccagattttggtatcctctgcaaagaagcaaaccttacctgacagccctcct
gtaatatttcttacaaaaaatgttaaaaagaacaggaccgatccttgcggcatgccactg
gaagaaaatgcagatatgccagattacactttgctgaagaaacaggatctcatgccaggc
agtgtttaccgattcagagtagcagcaatcaatggctgtggaataggtcctttcagtaaa
atcagtgaatttaagacctgtatccctggttttcctggagcaccatctgctgtcaaaatt
ataaagaacttggataacatccgtctttcctgggagcctccttcctcgccctctggaatt
atcttggaatattcagtttatctggcaatccgtacaactcagctacctgaggagaatcta
aaccagcttacctttatgaaagtttactgtggattaaagacttattgtactgtgtctaca
gcacagcttgccagtgctcatgttgactgtacatccaggcctgcggttgtgtttagaatc
tcagcaaagaatgaaaaaggatatggaccagccacacaagttcgatggcttcaagattca
aataaaaacagaaaggaaggaaagcataccgagtaa
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