Geotrypetes seraphini (Gaboon caecilian): 117364312
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Entry
117364312 CDS
T09159
Symbol
DYSF
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117364312 (DYSF)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsh04147
]
117364312 (DYSF)
Membrane trafficking [BR:
gsh04131
]
Endosome - Lysosome transport
Others
Ferlins
117364312 (DYSF)
Exosome [BR:
gsh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117364312 (DYSF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
PI3K_C2
PTEN_C2
Pex24p
Motif
Other DBs
NCBI-GeneID:
117364312
NCBI-ProteinID:
XP_033809292
UniProt:
A0A6P8RUK7
LinkDB
All DBs
Position
1:290205047..290744849
Genome browser
AA seq
2090 aa
AA seq
DB search
MLHCVLQRGCNLPSLEKRDRHSDPVASLSFRGVKKKTKVIKNNLNPVWNEVFDWDLKGVP
LEPAADLQVVVKDHEMVGRNRFLGEARVPLRDVLGSPILTASFNVFLLDTKKQNTGASIT
LQVSYFPPPGATPVLPPPPPPPDPTPAASAVELDTLTDITGEEDFEDLTDIGDEGETPSG
LPGPAAEQPTLPKKPALYPVQGIKRKRSASKKPLSNKPQDFQIRIRVIEARQLQSINIKP
VVKVTVAGQTKRTRIRKGNNPIFDETFFFNFFESPAELFNDPVFITVFDSRSLRTDSVLG
EFQMDIGTIYEEPKHAFLRKWLLLSDSEDFSAGAKGYLKVSLFVLGPGDEAPMDVKDVSE
DKEDIEGNLLRPAGVALRGAHLIMRIYRAEDLPQMDDAVLDNVKQIFGFDSNKKNLVDPF
VEISFAGKTLCSKIMEKNANPQWNQSITLPIRFPSMCEKMRIRLIDWDRLSHNDIISTAY
VCMSKISAPGGELEEDTPQKFYQVSDMDDGLGFLPTFGPSFVNLYGSPREFTGFPDPYEA
LNFGKGEGVAYRGRILVELETKLVEQIEQKVEDIPSDCLFRVEKYLRRRKYCLFAAFYSA
TMLQDIDDAIQFEVSIGNYGNKFDTTCLPLASTTQYSRAVFDGCQYYYLPWGNVKPVVVL
SSYWEDISHRIDAQNMLHHTVDRLEANLEQVHIAVKARCSPNDLDSLAARLIDDIIIGCS
QLLPDVRKIPSATPLDNYIYKFRKTNLNQIVQAAMKLKHEDSDLQMVLDQAEDWLLRLKT
ILEESQNSLPDIVIWMLQGDKRVAYYRMPAHEIIFSKNGSNCCGKNCGKLQTIFLKYPDQ
ESKSFKIPAQVRVQLWYGLSVHQNEFNQYAQGKLSVFAETYENQTKLALVGNWGTTGLTY
PKYSDVTGKIKLPKDSFRPSTGWNWAGDWFISPEKTLLYDIDAGHMSFVEEVFENQARLP
GGQWIHMTEAYTDVNGEKVLPKAEIECPLGWKWEDEEWSTDLNRAVDEHGWEYGITIPPD
RKPKSWVPAEKMYHTNRSRRWVRLRRRDLKQMEALKKHKVEEAEGEGWEYASLFGWKFHL
KYRKTDSFRRRRWRRRMEPLEKTGAAAVFALEGALGGITDDKSDDGKSVSTFGVNRPSVS
CIFDYGNRYHLRCYIYQARDLIPMDKDSFSDPYATVSFLHQSQKTVVIRSTLNPTWDQTL
IFYEIEIFGDPEIIAEVPPNIVVEIYDSDTYGADEYMGRCICKPSLERSPRLSWYPVIRG
NKNAGELLAAFELIKREKPAIHHIPGLECTTLGTLDELCTPGFFTEGLLEWSADTDLPYP
PPQRETNLFMVPQGIKPVLQRTAIEVLAWGVRNLKSYQLASVTSPSLLVECGDQMVSSCV
IKNVKKNPNFDVCVLFMEVRLPTENLYTPPIIVKVIDNRQFGRKPVVGQCTIRSLEEFYC
DPYGDETDSIDAHSDDMSLTPKDEVFIDIDEKELLIPPVQEEEFIDWWSKFYASTGEKEK
CGSYLEKGFDTLQVYETELENIEEYEGLTDFCRTFKLQRGKTYDENEDPSVVGEFKGTFK
LYPLPDDPSEPVPPRQFRQLPARGPQECLVRVYIIRAFGLQPKDTNGKCDPYVKISVGKK
SVHDQDNYIPCTLEPVFGKMFELTCTLPLEKDLKIMLYDYDLLSKDEKIGETVIDLENRF
LSKFGARCGLPETYCTSGPNQWRDQLRPSQLLQIFCQHRNCKAPIYKQDKIIFKGHEYTL
SEFEDSIPRNPHLGPPEERLALYVLRKQGLVLEHVEMRPLYSPLQPDIEQGKLQLWIDLF
PKCLGLPGPPFNITPRKAKRFYLRCIIWNTNDVILDDVSVTGEKMSDIYVKGWLMGHEEG
KQKTDVHYRSLGGEGNFNWRFVFPFDYLPAEQVCAISKKEHFWSLDKTENKIPPQLILQI
WDNDKFSFDDYLGSVQMDLNQMPRPAKNAEKCSLSLTDETLSPDRFVSLFEQKTVKGWWP
CSGEKDEKKILTGKIEMTLEIVAEHENEERPAGVGRDEPNMNPKLEDPKRPETSFFWFTS
PFKTMKYILWRRFKWLIILFIVVFILLLFLGIFLYSFPNYAAMKLVRPYS
NT seq
6273 nt
NT seq
+upstream
nt +downstream
nt
atgctgcattgtgtcttgcaacgagggtgcaacctgcccagcttggaaaagagagaccgg
cacagcgatccagtagccagcctgagctttcgaggagtgaagaagaaaaccaaagtgata
aagaataacttgaatcctgtttggaatgaggtatttgactgggatttaaaaggtgtgcca
ctggagcccgctgctgatcttcaggtggtagtgaaagaccatgaaatggtgggaagaaat
aggtttttgggtgaggcacgagttcctctgcgtgatgtgcttggttcccccatcttgaca
gcaagctttaatgtcttcctattggacaccaagaagcagaacacaggggcttctataact
ctgcaagtatcttacttccctccgcctggagcgactccagtgctcccaccaccacctcct
cctcctgaccccacccctgctgcttctgctgttgagctggacactctcaccgacataaca
ggagaggaagactttgaagatttaactgacataggagatgagggagaaaccccttcaggg
cttcctggccctgcagcagaacagccaacacttccaaagaagccagcactgtacccagtc
caagggattaaaaggaagagaagtgcttccaagaagccattatcaaacaagccacaggat
tttcagatcaggattcgagtgatagaagcgaggcagttacagagtataaatattaaacct
gttgtgaaggtgacggttgctggacagactaaaagaaccagaatacggaaagggaataat
ccaatctttgatgagaccttcttcttcaatttttttgaatctccagctgagctctttaat
gaccctgtatttattacggtgtttgattctcggtccttgcgaactgactctgtccttgga
gaatttcagatggatattggaacaatttatgaagagccaaagcatgccttcctcagaaag
tggcttctgctttctgactctgaagatttttcagctggtgccaaaggttacttgaaggtt
agcctgtttgtgctgggcccaggagatgaagctcctatggatgtgaaggatgtctctgaa
gataaggaggatatagagggaaatctgctgcgtccagctggggtggccctcaggggagct
cacctcattatgagaatttacagagctgaagatctacctcaaatggatgatgctgtcttg
gacaatgtgaaacaaatctttggctttgatagcaacaagaagaacctggtggatcctttt
gtggaaatcagctttgccggcaaaacgctttgtagtaagatcatggagaagaatgctaat
cctcaatggaaccaaagcatcactttgccgattcggtttccctccatgtgtgaaaaaatg
agaattcgattgattgattgggatcgtctaagtcacaatgatattattagcactgcctac
gtgtgcatgtctaaaatctcagcacctggaggggaacttgaagaagatactccacagaag
ttctatcaagtatcagacatggacgatggactaggattcctaccaacatttgggccctct
tttgtaaacctttatggaagtccaagagagtttactggatttccagatccttatgaagca
ctcaactttgggaaaggagaaggagtggcctatcggggcaggatccttgtggagctggag
accaaactagtggaacagattgaacagaaagtggaggacattccttctgattgccttttt
cgagttgagaagtaccttcgaaggaggaagtattgcttgttcgctgcgttctattctgcc
accatgcttcaggatattgatgatgccattcagtttgaagttagtattgggaactatggt
aacaaatttgacaccacctgtcttccattggcatctacaactcaatacagcagggctgta
tttgatggctgccaatattactatttgccctggggcaatgtgaaaccagtggttgtactg
tcgtcatactgggaagatattagtcacagaatagatgcacaaaatatgcttcaccatact
gttgaccggctggaagctaatttggagcaagtccacatcgctgtcaaggccaggtgctca
ccaaatgacttggattcattggctgcccggttgattgatgacatcatcattggctgcagc
cagcttttgccagatgttcgaaagatacctagtgctacccccttagacaactatatttac
aaatttcgtaagacaaatctaaatcagattgtgcaagctgcaatgaagctgaaacatgag
gattctgaccttcagatggtcttggaccaggcagaagattggcttttgcggctaaaaact
atcttagaggagtctcagaacagcctaccagatatagtgatttggatgttgcaaggagac
aagcgtgtagcctactatagaatgccagcccatgagatcatattctccaagaatggatcc
aattgttgcggcaagaattgtgggaaactgcagacaatattcctaaaatacccagaccaa
gaaagcaagagcttcaagatccccgctcaagtgcgagtgcagctgtggtatgggctttct
gtacatcaaaacgagtttaatcagtatgcccagggcaaactctctgtctttgccgagact
tatgaaaaccaaactaaactggcactagtaggaaactggggaacaacaggtctcacttac
cccaaatattctgatgtcactggcaagatcaagcttccgaaggacagcttccgtccctcc
actgggtggaattgggctggggattggtttatcagccctgaaaaaactttgctttatgat
atagatgctggtcacatgagttttgttgaggaagtgtttgaaaaccaggctcggttgcca
ggtgggcagtggattcacatgactgaggcttacacagatgtgaatggagagaaggtgctt
cctaaggctgagattgagtgtcccttaggctggaaatgggaagatgaggaatggtccaca
gatcttaatagagctgttgatgaacatggttgggagtatggcatcaccatccctccagac
cgcaaaccaaaatcatgggttcctgcagaaaagatgtaccacacaaatcgaagcagacgt
tgggtccgacttcgcaggagagacctgaaacagatggaggctctcaaaaagcataaagtt
gaagaggcggagggtgaaggatgggagtatgcatctctttttggctggaagttccatctc
aagtaccgcaagacggacagctttcgcagacgtcggtggaggcgccgcatggagccccta
gagaagacaggagctgcagctgtgtttgctttagaaggtgccctggggggaataacagat
gataaaagtgatgatggcaaatcggtctccacgtttggagtgaacagaccctctgtttcc
tgtatatttgactatggaaacagataccatctacgttgttacatctatcaagctcgagac
cttataccaatggataaggacagcttttcagatccctacgccactgtgtcatttcttcat
caaagccagaagacagtggtgattagaagcaccttgaatcctacatgggatcagacgctc
atcttctatgaaattgagatctttggtgatccagagattattgctgaagtccctcccaac
atcgtggttgaaatttatgacagtgatacctatggtgctgatgagtacatgggccgttgt
atctgtaagccaagcctggagcgctctcccaggttgtcctggtatcctgttattagggga
aataaaaatgcaggagaactgcttgctgcttttgaacttattaaaagagagaagccggcc
atccatcatattcctggtttagagtgcacaacattagggaccctggatgagctctgcact
cctggcttcttcactgaggggctccttgaatggtctgcagatacagacctaccatatccg
ccaccacagagggagaccaatctcttcatggtcccacaaggaatcaaaccagttctgcaa
cgtactgccattgaggtcttggcctggggagtgaggaatttgaagagctaccaacttgcc
agtgtgacttctcccagccttcttgtggagtgtggagatcagatggtttcatcgtgtgtc
atcaaaaatgttaaaaaaaatcccaactttgatgtctgtgtgctcttcatggaagtgcgt
ttacctacagaaaacctctacacaccacccatcattgtgaaagtcattgataacaggcag
tttgggaggaagccagtggtaggccagtgcaccatcaggtctttggaagagttctactgt
gatccctatggagatgagacagactctattgatgctcactcagatgacatgagtctcaca
cctaaagatgaggtgtttattgacatagatgaaaaggagcttctgattcctcctgttcag
gaagaagaattcatagattggtggagcaagttctatgcctcaactggagaaaaagagaaa
tgtggttcctatctggagaaaggctttgataccctgcaggtctatgaaacagagttagag
aatattgaggaatatgaaggtctgactgacttttgtcgcactttcaagctacaacgtggg
aaaacctatgatgaaaatgaagatccctctgtagttggggaattcaagggaactttcaag
ttatatccccttcccgatgatccatcagagcctgtgcctcctcgtcagttccgccagctt
ccagctaggggaccccaagaatgtcttgtaagggtctacatcattcgtgccttcggattg
caaccaaaagacaccaatggaaagtgtgatccctatgtaaagatttctgtaggaaagaaa
tcagtgcatgaccaagacaactacatcccgtgtacgctggaacctgtctttggaaagatg
tttgagctaacttgtactctgcctttggagaaggacctgaagattatgctgtatgactat
gatcttttatcaaaagatgaaaagattggggaaacagtgatagatctagagaacaggttt
ctatcaaaatttggagctcgatgtggtctaccagagacctattgcacgtctggacctaat
caatggcgagatcaactccgaccttctcagcttctccaaatcttctgtcaacaccgcaac
tgcaaggctccaatctacaagcaagacaagataatatttaaaggccatgagtataccttg
tcagaatttgaggacagcataccccgtaatcctcatctgggtccgcctgaggagcgtcta
gctttgtatgtgcttcggaagcaaggcttggtccttgaacatgtggaaatgaggccactt
tacagtccgttgcagcctgatattgagcagggaaagctacagctgtggatagacttgttt
ccgaagtgcttaggtctacctggtccaccattcaacataacaccacgaaaagcaaagagg
ttctacctgcgctgcattatctggaacaccaatgatgtgatcttagatgatgtcagtgta
actggagagaagatgagtgatatatacgtaaaaggctggttaatgggtcatgaagagggt
aaacagaagactgatgtgcactacaggtctttaggaggtgaagggaactttaactggaga
tttgtcttcccatttgattatcttcctgccgagcaagtttgtgcaatatcgaaaaaggaa
catttttggagcctagacaagacagaaaataaaattcctccacaactgattctacagatc
tgggacaatgataaattttcctttgatgattatttgggttctgttcaaatggacctaaac
cagatgccaagacctgcgaaaaatgctgagaagtgttctctaagcctgacggatgaaact
ctttcgcctgatagatttgtgtcactctttgaacagaaaactgtcaaaggttggtggccc
tgttccggagaaaaagacgagaagaagatcttaactggaaaaatagaaatgaccctagaa
attgtagccgaacatgagaatgaagaaagaccagctggagttggtcgtgatgaaccaaat
atgaatcctaaactggaagacccaaagcgcccagaaacttcattcttttggtttacatct
ccatttaaaacaatgaaatatattctgtggaggaggttcaaatggcttatcatcctattc
attgtagtcttcatcttgctgctcttcttggggattttcttatactctttcccgaactat
gctgcaatgaaattggtcagaccctacagctaa
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