Geotrypetes seraphini (Gaboon caecilian): 117364452
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Entry
117364452 CDS
T09159
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03018
RNA degradation
gsh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117364452 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
117364452 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117364452 (LSM4)
03041 Spliceosome [BR:
gsh03041
]
117364452 (LSM4)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117364452 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
117364452 (LSM4)
Spliceosome [BR:
gsh03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117364452 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117364452
NCBI-ProteinID:
XP_033809512
UniProt:
A0A6P8RV73
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All DBs
Position
8:complement(100763963..100815383)
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AA seq
138 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVMSKGRGRGGLQQQKQQKGRGAGGPGRGVFGGRGRGVP
GSGRGQLEKKPGRQSGKH
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgcttccattgtcattactgaaaactgctcagaatcaccctatgttagtggagctgaaa
aatggggaaacatataacgggcacttagtgagctgcgacaactggatgaatatcaatcta
cgagaagtcatatgcacatccagagatggtgataaattctggaggatgcctgagtgctac
attcgtggtagtacaatcaagtacctgcgcatccctgatgagatcatagacatggtgaaa
gaggaagtgatgtcaaagggtagaggtcgaggaggattgcagcagcagaagcagcagaaa
ggtcgtggagctggaggtcctggacgaggtgtatttggaggtcgagggagaggcgtacct
ggtagcggaagaggacagctggagaaaaaacctggaaggcagtcgggaaagcactga
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integrated database retrieval system
