Geotrypetes seraphini (Gaboon caecilian): 117364477
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Entry
117364477 CDS
T09159
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117364477
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gsh03310
]
117364477
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117364477
Nuclear receptors [BR:
gsh03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117364477
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117364477
NCBI-ProteinID:
XP_033809587
UniProt:
A0A6P8RVE5
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Position
8:114559957..114655225
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AA seq
463 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCSRQKNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQEQSAIKDGPDALTRVY
TTSVSSGLSDLDDISTLSDGLLFDLPLTPEGGNSYYTLDMMTSAQPSPDQSSIDLTDAKI
IKQESLYEMMMEPGLFTQNLGGAQLSSDVSMADIDRVAQNVIRSHTETCQYTTEELKKLI
WTFHSPEEIRNLQNKSCELVWQQCAQHISNAIQYVVEFAKRIDGFMDLCQNDQIILLKAG
CLEVLLVRMSRAFNPLNNTVFFEGKFGSIQMFKSLGCDDLISAMFELGRSLCRLQLSDEE
LALFTAAVLLSPDRPWLTESRKVQKLQELVYLALQHELQKKHANDDLLTKMVSKLPLMKT
ICNLHMDKLEFFRLLHPETAKNFPPLYKEVFSYELQYSDLRES
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgattccatgtaaaatatgtggagacaagtcctcggggatt
cactatggagtcatcacgtgtgagggatgtaagggtttctttcgacggagccagcagaat
aatgccagctattcctgttcccgccaaaagaactgtctgattgaccgaaccaaccgcaac
cgttgccagcactgtcgcctgcagaagtgtctggccttaggcatgtcacgtgatgctgta
aaatttggccggatgtccaagaagcagcgtgacagcctgtacgcagaggttcagaagcat
caacagagtcaagagcaaagtgcaatcaaagacggacctgatgctctgacgcgcgtctat
accaccagtgtcagcagcggcctctccgacctcgatgatatcagcaccctctcagacgga
ctcctctttgacctcccactcactccagaaggaggaaactcctattacacccttgacatg
atgacctctgctcagccatcccctgaccagtccagcattgacttgaccgatgccaaaata
atcaaacaggagtccttatatgagatgatgatggagccagggcttttcacacagaatctg
gggggtgcacagttgtcttcagacgtctcaatggcagacatcgaccgggtggctcagaat
gtgatcagatcccacacggagacctgccagtacacaacagaggagctgaagaagttgatc
tggacctttcactcaccagaagagatccgaaatcttcaaaacaagtcctgcgagctcgtc
tggcagcagtgcgcgcagcatatctccaacgccatccagtacgtggtggagtttgccaag
cgaattgacggctttatggacctgtgtcaaaacgaccagatcatcctcttgaaagcaggt
tgtctggaagtgctgctggttcgaatgagtcgagccttcaaccctttaaacaacacagtc
ttctttgaagggaagtttggcagcatccagatgttcaaatcactaggttgcgatgacttg
atcagtgcaatgtttgaactgggaaggagcctgtgtcgcctccagctttcagatgaggaa
cttgcactcttcactgccgctgtcctgctgtctccagatcgcccctggctgacagaatcc
agaaaggtacagaagctacaggaactagtttatctggcattacagcatgagctccagaag
aaacatgccaacgatgaccttctaactaagatggtttctaaactgcccttgatgaaaacc
atttgtaatctacatatggacaagctggaattcttccggcttctacacccagagaccgcc
aagaatttccctccactgtacaaagaggtcttcagctatgagctccagtactctgacctg
agagagagctag
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