Geotrypetes seraphini (Gaboon caecilian): 117364549
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Entry
117364549 CDS
T09159
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04814
Motor proteins
gsh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117364549
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117364549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117364549
03036 Chromosome and associated proteins [BR:
gsh03036
]
117364549
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsh04812
]
117364549
Membrane trafficking [BR:
gsh04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117364549
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
117364549
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
117364549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Baculo_PEP_C
FapA
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
117364549
NCBI-ProteinID:
XP_033809730
UniProt:
A0A6P8RVK7
LinkDB
All DBs
Position
1:295608591..295814758
Genome browser
AA seq
1249 aa
AA seq
DB search
MSLKAPSSGTSMSMEVTGKPVKVGLRVEVIGKGYRGTVAYVGATLFATGKWVGVILDEAK
GKNDGTVQGRRYFTCDENHGVFVRQSQIQVIEEGADAISPETPDSALSRVPKKEVAEAPK
VSKLPTRTSSSAASGGTAGSPSSTSASYGEISSSEASTPVQISLGAAIIPSPSSILTTSV
VPLPVPSPSKEEESLRAQVKDLEEKLETLKIKRNEDKAKLKELEKYKIQLEQLQEWKSKI
QEQQADLQKQLKDAKKEAREALEAKERYMEEMADTADAIEMATLDKEMAEERAESLLQEV
ESLKDKVEELTMDLEIVKHEIEEKGSDGAASSYQVKQLEEQNARLKEALVRMRDLSTSEK
QEHIKVQKHMEKKNNELESLCQQKMKLQQEVEQAERTIDELKEQVDAALGAEEMVETLTE
RNLDLEQKVRELHETVNDLEAINEMNDELQENGRETELELREQLDMAAVRVREAEKRVEA
AQETVADYQQTIKKYRDQTVHLKGIILELRSLQAAASVEKQQEPPLEVFDFKIKFAETKA
HAKAIEMELRKMEVRQANRHVSLLTTFMPNSFVRHGGDHDCILVLLLIPRLICKAEMISN
QAQEKFDLNGSFGERTGLRGAPGEQLSFAAGLVYSLSLLQTTLHKYEQALSKCSVEVYKK
VGMLYPEMSVHERSLDFLIDLLHKDQLDETVNVEPLTKAIKYYQHLYSIHLAEQPEDCTM
QLSDHIKFTLSALDCMAVEVGRLRAFLQEGQKASDLAILLKDLETSCSDIQQFCKKVRRR
MPGTDAPGIPAALNFGQQVSDSLLDCRKHLTWVVAVLQEVAAVGAQMVAPLSENEGLQAG
RLENLAFKAAEQVYGAQGINPHECLHQSCNIVIATMNKMATAMQEGEYDADKPQSRLPPP
VEQRAASLRAEITDAEGIGLKLEDRETVIKELKKSLKIKGEELSEAHVRLSLLEKKLDSA
SKDADDRVEKIQTKLDETQIQLKKKEKEFEETMDSLQADIDQLESEKTELRQRLNNQSKR
TIEGLRGAPSGVASIVSGIAGAVNSGQLVGSSSGPIQVKDSPLLLQQIDALRLSVNHLKH
ENNRLKAAQMNAELGALPPLHISKLAFPKEGQVAAVIPNTLYRKTNQLLEILQLMSASAK
VVDITHKKTGSPAAQLLEQTVRLQYLGETIDKLKDEVLKETVSQCPGANVPSSFAMFPSS
SFIKAKEEKKEDTVYIGKVTLPCEPGHGQVHQLVLTQEQFYELHSRLIS
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgaaggcaccaagttctgggaccagcatgagtatggaagtgactggaaagccg
gtgaaagtaggcttgcgggttgaagttattggaaaaggataccgtggcactgtggcctat
gttggtgccaccttgtttgcaacaggaaaatgggttggagttattttggatgaagccaag
ggcaagaatgatggaactgtacaggggagaaggtatttcacctgtgatgagaatcatggc
gtttttgtacgacaatcgcagatccaggttattgaagaaggagcagatgccatatcacca
gaaactccagattctgctttgtccagggtccccaagaaagaagtggcagaagctccaaaa
gttagcaagttgcctacacggacatcaagctctgcagcctctggtgggactgcaggatct
cccagttccacttctgcatcatatggtgagattagcagcagtgaggccagtacacctgtt
cagatttctctaggtgctgctatcatccctagtccatcatctatcttgaccacatcggtg
gttccacttcctgttccatcacccagtaaggaagaggaaagccttcgtgcacaagtgaaa
gatctggaggaaaaactagagaccttgaagattaagaggaatgaagacaaagccaagctc
aaagagttggagaaatacaagattcagctggagcagcttcaagaatggaaaagcaaaatt
caggagcagcaggccgacctacaaaagcagctcaaagatgccaaaaaggaagcaagagag
gcacttgaagcaaaggaacgttacatggaagaaatggctgacacagctgatgccattgag
atggcaactctagacaaggaaatggctgaagagagggctgaatccctcctgcaggaagtt
gaatccctgaaagataaagtggaagagctcacaatggacttggaaattgtcaaacatgaa
attgaagagaaaggctcagatggagcagcatccagctatcaggtcaagcaacttgaggaa
caaaatgccaggctgaaggaagcccttgtccggatgcgtgatctctctacatcggagaag
caggagcacatcaaagtccagaagcacatggagaagaaaaataacgaactagagtcattg
tgccagcagaaaatgaaactgcagcaggaagtagagcaagctgagaggacaatcgatgaa
ctgaaggagcaagtagatgctgctctgggtgctgaagagatggtggagacattgactgaa
agaaacctagatctagagcagaaggttcgagagctgcatgagacagtcaatgacctggaa
gcaataaatgaaatgaacgatgagctgcaagagaatggcagagaaacagaactggaactg
agggagcagctggacatggctgcagttcgtgtgcgagaggcagagaaacgtgtggaggct
gctcaggagactgtggcggactatcagcaaaccattaaaaaataccgggatcaaacagta
cacctaaagggtatcatcctagaattaaggagtctgcaagcagctgcttctgtagaaaaa
cagcaggaacctccccttgaagtgtttgacttcaagatcaaatttgctgagacaaaggct
catgccaaggccatcgagatggagttgcgtaagatggaggtacgtcaggccaatcggcat
gtgtctctcttgaccaccttcatgcccaacagctttgtgcgacatggaggggaccatgac
tgtatcctagtgctgctgcttattccacgacttatatgcaaggctgaaatgatcagtaac
caggctcaagagaagtttgatctgaatgggagttttggagaacggactggacttcgtgga
gcacctggagagcagttgagctttgcagctgggcttgtatattcactcagcctcctacag
accacactacacaaatatgagcaggccctgagtaaatgcagtgtggaagtctataaaaag
gtgggaatgctgtatcctgagatgagtgtccatgaacgctccctggatttcctgattgac
ctgctgcataaggatcagttggatgaaactgtgaatgtggagccattgacaaaggctatt
aaatactatcagcatctctacagtatccacttggctgaacaaccagaagattgcaccatg
cagctgtctgaccatattaagtttactctgagtgccttggactgcatggcagtagaagtg
ggaagactccgagcctttttgcaggaagggcaaaaggcctcagatctagccatccttttg
aaagatttggaaacctcttgcagtgacatccagcagttctgcaaaaaggtcaggcggcgc
atgcctggtacagatgcacctggaatacctgcagcactcaactttggacaacaggtatca
gattcactgttggattgccgcaagcatcttacttgggtggtggcggtgctgcaggaagtg
gctgctgtaggagcacagatggttgcacccttgtctgaaaatgaagggttacaggcaggc
aggctggaaaatctagcatttaaagctgctgaacaggtttatggtgctcaaggtatcaac
cctcatgagtgtctgcatcagtcctgcaatattgttattgcaacaatgaataagatggct
acagccatgcaggaaggagagtatgatgctgacaagccccaaagcaggttgccaccacca
gtagaacagagggctgcttctctcagagctgagatcacagatgctgaaggaattggtttg
aaactggaagacagagagacagtcattaaagaactgaagaagtcactcaaaatcaagggt
gaagagttgagtgaggcccatgtgcgtctcagtctcctagagaaaaaactggatagtgct
tccaaagatgcagatgatcgggtagaaaaaatacaaaccaagctagatgagacacagatt
cagctcaaaaagaaggagaaggaatttgaagaaacgatggactctcttcaggctgatatt
gaccaactagagtctgagaagacagagctaaggcaacgcctgaacaatcaatctaaacga
accattgagggcctgcgtggggcaccatctggagtagcctctattgtctctggtattgca
ggagcagtcaattctggtcagttggtaggaagcagctctggccccatccaggttaaggat
tctcctctcctcttgcagcagattgatgcgttgagattgtctgtcaaccatttgaagcat
gagaacaatagactgaaggcagctcagatgaatgctgaacttggagcactgccacctctt
cacatctcaaagcttgcatttcccaaagaaggtcaggtagctgcagtgattcccaacaca
ttataccggaagacgaatcagctgctggaaatcctacagctaatgagtgctagtgccaag
gtggtggacatcacacacaagaaaacaggaagtccagcagctcagcttctagagcagaca
gtcagactgcagtatctgggcgaaaccattgacaaactgaaggatgaggtgttgaaggag
acagtctctcagtgtcctggtgctaatgttccctccagttttgccatgtttccgtcatca
tctttcataaaggccaaagaggagaaaaaagaagatacagtttacattggcaaagtgacc
ctgccatgcgaacctggacatggccaagtacatcagcttgtcctgactcaagaacagttc
tatgagctgcacagccggctaatctcctaa
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integrated database retrieval system
