Geotrypetes seraphini (Gaboon caecilian): 117364656
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Entry
117364656 CDS
T09159
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04517
IgSF CAM signaling
gsh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117364656 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117364656 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsh04812
]
117364656 (SPTBN4)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117364656 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
117364656 (SPTBN4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
SOS1_NGEF_PH
PH_11
PH_17
Motif
Other DBs
NCBI-GeneID:
117364656
NCBI-ProteinID:
XP_033809985
UniProt:
A0A6P8RW81
LinkDB
All DBs
Position
8:complement(51220413..51640936)
Genome browser
AA seq
2540 aa
AA seq
DB search
MGAAAVVHVASMASVAVELDNMEVHQPQVNNNNRWENVDRAWDEATATAKLFECSRIKAL
ADERDAVQKKTFSKWVNSHLARVSCRIGDLYSDLRDGYMLTKLLEVLSGEQLPKPTRGRM
RIHSLENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQGIKVETED
NRETRSAKDALLLWCQMKTAGYPEVNIQNFSASWRDGLAFNALIHKHRPDLLDFNKLTKS
NAMYNLQQAFNTAEQYLGLTKLLDPEDVNMENPDEKSIITYVVSFYHYFSKMKALAVEGK
RIGKVLDQAIEIERVIERYESLASELLQWIERTISIISNQKFANSLPGVQQQLQAFTTYC
TMEKPAKFQEKGNLEVLLFTIQSDMRAKNRKPYIPHEGNSISDINKAWERLEKAEHEREV
ALREELIRQEKLELLAQRFDHKAAMREAWLSENQKLVSQDNFGYDLPAVEAAMKKHEAIE
ADISSYQERIQVLEELAVEMEKENYYDIKRINAQKDNILRQWNLLTELVEARRQRLEQNR
SLQKIFQEMVHMIDWMEEMQVLVASKDLGKHLLEVEDLRQKHSLLEADIAAQTERVSALN
EAALKFTQVQGYQPCDPQVICNRVNHVKTCMEELCDLAMRRHVELEESSQLWAFLQEMEE
TESWVREKEQILSSQSYGKDLSSVMRLMSKHKILTGELGRRRTLLNQTMKKGEKILVKKR
FEVTNICEKIKEVRVQWTKLEEMTTVHQQKLQEASNFHQFSADTDDLVAWLQDTYRLVSS
DDFGHDEYSTQSLVKKHKGVVEEIEKHRAVVLSLRKHLAVLAPEYRDLVDVQIRIVEVEQ
LYSEVAEVAVLRRQWLQDALAVYRMFSEVNACEVWIDEKEQWLNKMEVPEKLEDVEVVQH
RFESLDQEMNSLMGRVLDVNQIVQQLVDGGHPSASEVRACQDHLNSRWNKIVELVERKKD
HLNSILRIQNYLLECTELKSQISEKRKAMECTQPSSGDLGGVLSLQRKLFTMEAALVAIE
PKLIELQQDAEVLATAHPAQALGILMQFEEISEEWEALKKTMQGCEDSLTVATRLQQFIQ
DLDNFLTWLVKTQAAVATEELPNNLQEAEKLLNQHATLKEEINHYEEEYNKIQTLSELLS
LEEADIPYLSLQQWLQKLEAGWTKLLLMWESRREVLVQSHIFHLFLRDVKQAEMCLNNQE
STLAHMELPDTVEAVEKNIKKHKDFLTTMELNVQKIKVAVDAGEDLIKSGNIYADRVQDR
INALWKRSQQNFDMAQQWLQNLNGHLELQRFLQDCSELDDWVSQKMLMAHETCRDQTQKP
HKKWLRHQAFIAELAQNKEWLEKIHKEGYQLIQERPELESVVKGKLEEIQQYWAELENTT
QARARQLCEANKAEHLAQNYLDLDKRLAHLEGQLHYVESGSDITSVNNQLKKLQTMENQM
EEWCKEAGQLQAHVSSLPLETSSQEAVEEKQNAVGTRIVRLIEPLKERRRILLAFKEVHQ
VSHDLEDEISWVQERLPLAMMKEHGNNLQKVQQFIKKNQNLRREVQVHRSRMDDVLERAA
AIASIKSPEAEEVRLSLEKLRQLWDTLREEVERRQQLLDATYQVQQYYFDVAEVETWLSE
QELLMMNDEKGKDEQSTLQLLKKHLMLEQTIENYEETITQLSRQCRSLLELDHPDSEQIS
KRQSQIDRLYVSLKDLVEERRGRLEQQYWLFQLNREVDELEHWIAEKEVVAGSPELGQDY
EHVTLLQDKFTEFASETGNVGHERISTVNQMVDELIDYGHTDAATIAEWKDGVNEAWAEL
LELMETRAQMLAASHELHKFFSDCKDALFQIEEKKQRLPVVTAQEPKTCARSLQRSLSSF
EQDVQNLVSQVQQLQETAAQLRMVYAGPNAEAIALKEQEVARSWKELLTSCEDCRLQIST
TTDKMRFLGMARDLISWMESIICQIGTGEKPRDTSSVEVLMCYHQGLKGEIEARNQDIVT
CVDLGKTLVLNKSPATEEIKASLEKLMVKKNEMTGKWDQHWEWLQQMLEVHQFAQEAVVA
DAWLTAQEPILKSRELGNSVDEVEQLIRRHEAFRRTAAAWEERFSSLRRLTTLEKLKAEQ
NKQPATPLLGRKFAGDPPEGTVKTPQLLHSTLYAKSEARLEKPESQPVLNGILLEPKETK
PEGPEPTVAYVQQEIKPERLQPKIDHVQNNMEPSLDIKSPDLQEKSDIKAPAKERFKPDK
LEPKLLTQETPGTKSAESSETRHGERRRERYEKRLERQESSEQETPRQEQMERRRERHER
RLERQESSEQETPRHDQSEKKGKATLADIVEQLQEKEAAQFRERESPARLLNGIDKLPER
TPRPDRPRARDRPKPRRRPRPKDPNQPPGEARRSRSAPAQSSAPPAPPPTHTVQQEGFLF
RKHELEGPNKKASNRSWVNLYCVVSKGDLGTYKDAKSHSSGSTYGGEPLLNLNNATCDVA
SDYKKKKHVFKLRTQDGNEFLFQAKDEDEMKTWIQAISSAVSEHAEIARWGQALLTTSST
DEGNLKRDPDRRPSASSRKK
NT seq
7623 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcagctgctgtggttcatgtcgcttcaatggccagtgttgcagtggagctggac
aacatggaggtccaccagccgcaggtcaacaacaacaaccgctgggagaatgttgaccgt
gcctgggacgaggccacagctaccgccaaactctttgaatgctcccggatcaaagctctt
gcagatgaacgagatgcagtgcagaagaaaaccttttccaaatgggtgaactcccacctg
gctcgagtgtcctgccgcatcggtgacctttacagtgacctccgagatggctacatgctg
accaaactacttgaggtgctatcaggggaacagctgccaaagcccactcggggccgaatg
aggatccattcactggagaatgtggacaaagccctgcaattcctgaaagagcagcgtgtg
catttggagaatgtgggctcccatgacattgtggacggcaatcaccggctgaccctaggg
ctcatctggaccatcattctgagattccagattcagggcattaaggtagaaacagaagat
aaccgggagacacgctctgcaaaggatgcactgctgctctggtgccagatgaaaactgca
ggatatcctgaggtgaacattcagaatttcagcgccagttggcgagatgggcttgccttc
aatgctttaatccacaaacacaggccggatctcctggatttcaacaagctgaccaaatcc
aatgctatgtacaaccttcaacaggcattcaacactgcagaacagtatctgggactcact
aagttactggaccctgaagatgtaaacatggagaacccagatgagaaatctataattaca
tatgtggtgtccttttaccattacttctccaaaatgaaggcgcttgctgtggaagggaag
agaattgggaaggtcctggatcaggccattgagatcgagagggtcattgaacgatatgaa
tctctggccagcgagctcctgcagtggattgaaagaaccatcagcatcatcagtaatcag
aagtttgccaattctttgccaggggtgcagcagcagctacaggcttttaccacatattgt
actatggaaaaaccagccaagtttcaagaaaagggaaatttagaggttttgctgtttacc
atccaaagtgacatgagagcaaagaaccgcaaaccatacatcccacatgagggcaacagc
atttccgatatcaataaggcctgggagaggctggagaaggcagagcatgagcgggaggtg
gcactacgggaagagctgatccgccaagagaaactggaactgttagctcagcgttttgac
cacaaggcagcaatgagggaggcatggctgagtgagaaccaaaagctagtgtctcaggac
aactttggttatgatttaccagcagtggaagcggccatgaagaagcatgaggccattgaa
gcagacatctcttcctaccaggagcggatccaggttctagaggaattggctgtggaaatg
gagaaagaaaattactatgacatcaagcgcataaatgcacagaaagacaacatcttgcga
cagtggaaccttctgactgaattggtggaagctcgtcgccagcgcctggaacagaatagg
tccctccagaagatcttccaggaaatggtccatatgatcgactggatggaagagatgcag
gtgctagtggcatccaaggaccttgggaagcatctgttggaggtagaggaccttcggcag
aagcacagcctgctagaagcagacattgctgctcagacagagagagtcagtgctctcaat
gaagctgctctgaagtttacacaagtgcaaggttatcaaccatgtgaccctcaggtgatt
tgtaaccgggttaaccatgtgaaaacctgtatggaggagctgtgtgatcttgccatgaga
cgccatgtagaattggaggaatccagccagctttgggctttcttgcaagagatggaagag
acagaaagttgggtacgagagaaggagcagatactctcctctcagagctatgggaaggac
ttgagtagtgttatgaggcttatgagcaaacacaagattttaaccggggaattaggcagg
aggaggactctactgaaccaaactatgaagaaaggagagaagatcttggtcaagaaacgt
tttgaagtcaccaatatctgtgagaaaatcaaagaagtcagggttcagtggacaaagttg
gaggaaatgaccaccgtccatcaacagaaactccaggaagcctctaatttccaccaattc
agtgcggacacagatgacttggtggcttggctccaggacacttaccgtcttgtttctagt
gatgactttggccatgatgagtattcaacccagtctcttgtgaaaaagcacaaaggggta
gtggaagagattgagaagcatcgggcagtggtcttgtctttgcgtaaacatcttgccgtt
ctggcaccagagtaccgtgacttggtggatgtgcagatccgcattgtggaggtggagcag
ctctacagtgaggtggcagaagtggcagtcctgcgacggcagtggcttcaggatgctttg
gctgtctacaggatgttcagtgaagtgaatgcctgtgaggtctggattgatgagaaagaa
cagtggctaaataaaatggaggtaccagaaaagctggaagatgttgaggtggtccagcac
aggtttgagagtctagatcaggaaatgaacagtttaatgggacgtgtcctagacgtgaac
cagattgtgcaacaactggttgatggaggtcaccccagtgcttctgaagtcagagcttgt
caagaccatttgaatagcaggtggaacaagattgttgagcttgtcgaacggaagaaggat
cacttgaattccatcctgcgcatccagaactaccttctggaatgtactgagctgaagtcc
cagatctcagagaagaggaaagccatggagtgcacacagcccagcagcggtgacctaggt
ggagtcctttcccttcagcggaaactcttcaccatggaggctgccctggtggcgatagag
cctaagctgattgagctgcagcaggacgcagaagtgctggccactgcccacccagcccaa
gccctgggtattctgatgcagtttgaggagatcagtgaagagtgggaggcattgaagaag
accatgcagggctgtgaggactcgctgaccgtggccaccaggttgcagcagttcattcag
gacttggacaattttctcacctggcttgtcaagacccaggcagctgttgccacagaggag
ctgcccaataacctccaagaggctgagaaactcctaaatcaacatgcaaccctcaaagag
gagataaaccattacgaagaggagtataataagatccagactctgagtgagctgctgtct
ttggaggaagcggacattccctacctgtctctacaacagtggctccagaagctggaggca
ggctggaccaagctgctgctcatgtgggagagcaggcgggaggtccttgtgcagtctcac
atcttccacctctttttgcgcgatgtcaagcaggctgagatgtgtctgaacaaccaggaa
tctaccttggctcatatggaattgcccgacacagtggaagcagtggaaaaaaacataaaa
aagcacaaagatttcttgaccaccatggagctaaatgtacaaaagatcaaggtggctgtt
gatgctggggaagacctcatcaagtcagggaatatttacgccgacagagtccaggacagg
atcaatgccctgtggaagaggagccaacagaactttgacatggcacagcagtggctgcag
aatctgaatggtcatttggagctgcagcgattcctgcaggactgcagcgagctggatgac
tgggtcagccagaagatgctgatggcccacgagacttgcagggaccagacgcagaagccc
cacaagaaatggctcaggcaccaggccttcatagctgagctggctcagaataaagagtgg
ctggaaaagatacacaaggaaggttatcagctgattcaagaaaggccagagctggaaagt
gtggtgaagggcaaactagaggagattcagcaatactgggctgaactggagaacacgacc
caagccagggccaggcaactgtgcgaggccaataaggccgaacacctagcgcagaactac
ctggacttggacaagagactggcacacctggaagggcaacttcattatgtggaatctggc
agcgacataaccagtgtcaacaatcagttgaagaagctacagacaatggagaaccagatg
gaagagtggtgcaaggaagctggccagctgcaagcacatgtgtcttctcttccattggag
acttccagccaagaagcagtggaggagaaacagaatgcagtgggcaccagaattgtacgt
cttattgagcccttgaaagaaaggagaagaatcctactggccttcaaagaggtccatcaa
gtcagccatgatctagaggatgaaatttcctgggtccaagaaaggctcccccttgccatg
atgaaagaacatggaaacaacctgcagaaagtccagcagtttataaagaaaaaccagaac
cttcgcagggaagtacaggtgcacagatctcgtatggatgatgtgctggagcgggcggcg
gccattgcttcaattaagagtcctgaagctgaagaagtgcgactaagcctagagaagcta
aggcaactatgggacactctaagggaggaggtggagaggaggcagcagctactggatgcc
acctaccaggtccaacagtattactttgacgtggctgaggtggagacatggctcagtgaa
caggagttactcatgatgaatgatgagaaaggaaaggatgaacaaagtacgttacagctg
ctgaagaagcatcttatgctggagcagacgattgagaattatgaagagactattactcag
ctgtcgcgtcagtgccggtcccttctggaactggaccatcctgacagcgagcagataagt
aagcgccagtctcagattgaccggctgtacgtgtctctgaaggacctggtggaagaacgt
cgaggaaggctcgagcagcagtactggctcttccagctcaaccgagaagtggatgaactg
gaacactggattgccgagaaggaggtggtggcagggtctccagagcttggacaggactat
gaacatgtcacgctgctgcaggataaattcactgaatttgccagtgagacaggaaatgtt
ggacatgaacggatctctacggtgaatcagatggtggatgagctaatagactatggacat
acagatgctgcgaccatcgcagaatggaaagatggtgtaaacgaagcttgggctgagcta
ctggaactgatggaaactcgggcgcagatgctggcagcctctcatgaactccataaattt
ttcagtgactgcaaggatgctctgttccaaattgaggagaagaagcaacgacttccagtt
gtgactgctcaagagcccaaaacttgtgccaggagtctccagaggtcactgagctccttt
gagcaggatgttcagaacttggtttcccaggtgcagcagctacaggaaactgcagcccag
ttgaggatggtgtatgctggacccaatgctgaggccattgccttgaaggagcaggaggtg
gcacggtcttggaaagagcttctgacatcctgtgaggactgccgattgcagattagcacc
accacggataagatgcgcttccttggtatggcacgtgacctcatctcctggatggagagt
attatctgccagattggcactggagagaaacccagggacacatcttctgtggaggtgctc
atgtgttatcaccagggcctgaagggtgagattgaggctcgtaaccaggacatcgtgacc
tgcgtagacctggggaagacgctggtgctgaacaagagcccagccactgaggagatcaag
gcaagcctggaaaaattaatggtgaagaagaatgagatgactgggaaatgggaccagcac
tgggagtggctgcagcagatgctggaagtccatcagtttgcccaagaagctgtggtagct
gatgcttggctaacggcccaagagcccatattgaagagccgagagctaggcaatagtgtg
gatgaggtggaacaactgatccgtcggcatgaggctttccgtagaacggcagcagcctgg
gaagagcggttcagctccttgcgacgcctcaccacgttggaaaaattgaaagcagagcag
aacaaacagccagccacacccctgctgggacgtaaatttgctggggacccaccagaaggc
acagtcaaaacaccccaattactccattcaacactatatgcaaagtctgaggctagactt
gaaaagccagagtcgcagcctgtcctgaatggcattcttctagagccaaaggaaacaaaa
cctgaagggccagagccaacagtcgcctatgtgcagcaagaaatcaaaccagagcggctg
caaccaaaaatagaccatgtgcagaacaatatggaaccctccctagacatcaagtcccca
gaccttcaggaaaagtcagacatcaaagcaccagccaaggaaaggttcaaacctgacaag
ctagagcccaagctgctaacccaagaaacgcccggcacaaagagtgctgagagttcagaa
accaggcatggagagcgccggcgtgagagatatgaaaaaagactggagaggcaggaatcc
agtgagcaggagactccacggcaggagcaaatggaaaggagacgagagcgtcacgaacgg
aggttggaaagacaggagtccagtgagcaggagactcccagacatgaccaatctgaaaaa
aaagggaaggcgaccttggcagacattgtggaacagcttcaggagaaagaagcagcccag
tttcgtgaaagggagtctccagctcgcctactcaatggcattgacaagcttcctgagaga
acaccaaggccggacaggccccgagccagggatagaccaaagcccaggagaaggcctcgt
cccaaggatcctaaccagcccccaggagaagcacgacgctctcgctcagctccagcacag
agcagcgccccaccagccccaccaccgacccacactgttcagcaagaaggcttcctgttt
cgcaagcatgaactggaagggccaaataaaaaggcctcaaacagatcttgggtaaacctt
tactgcgtcgttagcaaaggtgatttaggaacttacaaggatgcaaagagtcacagctct
ggcagcacatatggcggggaacccttactgaacctgaacaatgccacatgtgatgttgcc
agtgactacaaaaaaaagaaacatgtcttcaaactgaggacacaggatggcaatgaattt
ctcttccaagcaaaggatgaggatgagatgaagacctggatccaggccatttcaagtgcc
gtctcagagcatgctgagattgctaggtggggtcaggcgctcctcaccacctcttccacc
gatgagggcaacctgaaacgagaccctgatcgcaggcccagtgcttccagcaggaagaaa
taa
DBGET
integrated database retrieval system
