Geotrypetes seraphini (Gaboon caecilian): 117364656
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Entry
117364656 CDS
T09159
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117364656 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsh04812
]
117364656 (SPTBN4)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117364656 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
117364656 (SPTBN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_17
PH_11
SLATT_6
Motif
Other DBs
NCBI-GeneID:
117364656
NCBI-ProteinID:
XP_033809985
UniProt:
A0A6P8RW81
LinkDB
All DBs
Position
8:complement(51220413..51640936)
Genome browser
AA seq
2540 aa
AA seq
DB search
MGAAAVVHVASMASVAVELDNMEVHQPQVNNNNRWENVDRAWDEATATAKLFECSRIKAL
ADERDAVQKKTFSKWVNSHLARVSCRIGDLYSDLRDGYMLTKLLEVLSGEQLPKPTRGRM
RIHSLENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQGIKVETED
NRETRSAKDALLLWCQMKTAGYPEVNIQNFSASWRDGLAFNALIHKHRPDLLDFNKLTKS
NAMYNLQQAFNTAEQYLGLTKLLDPEDVNMENPDEKSIITYVVSFYHYFSKMKALAVEGK
RIGKVLDQAIEIERVIERYESLASELLQWIERTISIISNQKFANSLPGVQQQLQAFTTYC
TMEKPAKFQEKGNLEVLLFTIQSDMRAKNRKPYIPHEGNSISDINKAWERLEKAEHEREV
ALREELIRQEKLELLAQRFDHKAAMREAWLSENQKLVSQDNFGYDLPAVEAAMKKHEAIE
ADISSYQERIQVLEELAVEMEKENYYDIKRINAQKDNILRQWNLLTELVEARRQRLEQNR
SLQKIFQEMVHMIDWMEEMQVLVASKDLGKHLLEVEDLRQKHSLLEADIAAQTERVSALN
EAALKFTQVQGYQPCDPQVICNRVNHVKTCMEELCDLAMRRHVELEESSQLWAFLQEMEE
TESWVREKEQILSSQSYGKDLSSVMRLMSKHKILTGELGRRRTLLNQTMKKGEKILVKKR
FEVTNICEKIKEVRVQWTKLEEMTTVHQQKLQEASNFHQFSADTDDLVAWLQDTYRLVSS
DDFGHDEYSTQSLVKKHKGVVEEIEKHRAVVLSLRKHLAVLAPEYRDLVDVQIRIVEVEQ
LYSEVAEVAVLRRQWLQDALAVYRMFSEVNACEVWIDEKEQWLNKMEVPEKLEDVEVVQH
RFESLDQEMNSLMGRVLDVNQIVQQLVDGGHPSASEVRACQDHLNSRWNKIVELVERKKD
HLNSILRIQNYLLECTELKSQISEKRKAMECTQPSSGDLGGVLSLQRKLFTMEAALVAIE
PKLIELQQDAEVLATAHPAQALGILMQFEEISEEWEALKKTMQGCEDSLTVATRLQQFIQ
DLDNFLTWLVKTQAAVATEELPNNLQEAEKLLNQHATLKEEINHYEEEYNKIQTLSELLS
LEEADIPYLSLQQWLQKLEAGWTKLLLMWESRREVLVQSHIFHLFLRDVKQAEMCLNNQE
STLAHMELPDTVEAVEKNIKKHKDFLTTMELNVQKIKVAVDAGEDLIKSGNIYADRVQDR
INALWKRSQQNFDMAQQWLQNLNGHLELQRFLQDCSELDDWVSQKMLMAHETCRDQTQKP
HKKWLRHQAFIAELAQNKEWLEKIHKEGYQLIQERPELESVVKGKLEEIQQYWAELENTT
QARARQLCEANKAEHLAQNYLDLDKRLAHLEGQLHYVESGSDITSVNNQLKKLQTMENQM
EEWCKEAGQLQAHVSSLPLETSSQEAVEEKQNAVGTRIVRLIEPLKERRRILLAFKEVHQ
VSHDLEDEISWVQERLPLAMMKEHGNNLQKVQQFIKKNQNLRREVQVHRSRMDDVLERAA
AIASIKSPEAEEVRLSLEKLRQLWDTLREEVERRQQLLDATYQVQQYYFDVAEVETWLSE
QELLMMNDEKGKDEQSTLQLLKKHLMLEQTIENYEETITQLSRQCRSLLELDHPDSEQIS
KRQSQIDRLYVSLKDLVEERRGRLEQQYWLFQLNREVDELEHWIAEKEVVAGSPELGQDY
EHVTLLQDKFTEFASETGNVGHERISTVNQMVDELIDYGHTDAATIAEWKDGVNEAWAEL
LELMETRAQMLAASHELHKFFSDCKDALFQIEEKKQRLPVVTAQEPKTCARSLQRSLSSF
EQDVQNLVSQVQQLQETAAQLRMVYAGPNAEAIALKEQEVARSWKELLTSCEDCRLQIST
TTDKMRFLGMARDLISWMESIICQIGTGEKPRDTSSVEVLMCYHQGLKGEIEARNQDIVT
CVDLGKTLVLNKSPATEEIKASLEKLMVKKNEMTGKWDQHWEWLQQMLEVHQFAQEAVVA
DAWLTAQEPILKSRELGNSVDEVEQLIRRHEAFRRTAAAWEERFSSLRRLTTLEKLKAEQ
NKQPATPLLGRKFAGDPPEGTVKTPQLLHSTLYAKSEARLEKPESQPVLNGILLEPKETK
PEGPEPTVAYVQQEIKPERLQPKIDHVQNNMEPSLDIKSPDLQEKSDIKAPAKERFKPDK
LEPKLLTQETPGTKSAESSETRHGERRRERYEKRLERQESSEQETPRQEQMERRRERHER
RLERQESSEQETPRHDQSEKKGKATLADIVEQLQEKEAAQFRERESPARLLNGIDKLPER
TPRPDRPRARDRPKPRRRPRPKDPNQPPGEARRSRSAPAQSSAPPAPPPTHTVQQEGFLF
RKHELEGPNKKASNRSWVNLYCVVSKGDLGTYKDAKSHSSGSTYGGEPLLNLNNATCDVA
SDYKKKKHVFKLRTQDGNEFLFQAKDEDEMKTWIQAISSAVSEHAEIARWGQALLTTSST
DEGNLKRDPDRRPSASSRKK
NT seq
7623 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcagctgctgtggttcatgtcgcttcaatggccagtgttgcagtggagctggac
aacatggaggtccaccagccgcaggtcaacaacaacaaccgctgggagaatgttgaccgt
gcctgggacgaggccacagctaccgccaaactctttgaatgctcccggatcaaagctctt
gcagatgaacgagatgcagtgcagaagaaaaccttttccaaatgggtgaactcccacctg
gctcgagtgtcctgccgcatcggtgacctttacagtgacctccgagatggctacatgctg
accaaactacttgaggtgctatcaggggaacagctgccaaagcccactcggggccgaatg
aggatccattcactggagaatgtggacaaagccctgcaattcctgaaagagcagcgtgtg
catttggagaatgtgggctcccatgacattgtggacggcaatcaccggctgaccctaggg
ctcatctggaccatcattctgagattccagattcagggcattaaggtagaaacagaagat
aaccgggagacacgctctgcaaaggatgcactgctgctctggtgccagatgaaaactgca
ggatatcctgaggtgaacattcagaatttcagcgccagttggcgagatgggcttgccttc
aatgctttaatccacaaacacaggccggatctcctggatttcaacaagctgaccaaatcc
aatgctatgtacaaccttcaacaggcattcaacactgcagaacagtatctgggactcact
aagttactggaccctgaagatgtaaacatggagaacccagatgagaaatctataattaca
tatgtggtgtccttttaccattacttctccaaaatgaaggcgcttgctgtggaagggaag
agaattgggaaggtcctggatcaggccattgagatcgagagggtcattgaacgatatgaa
tctctggccagcgagctcctgcagtggattgaaagaaccatcagcatcatcagtaatcag
aagtttgccaattctttgccaggggtgcagcagcagctacaggcttttaccacatattgt
actatggaaaaaccagccaagtttcaagaaaagggaaatttagaggttttgctgtttacc
atccaaagtgacatgagagcaaagaaccgcaaaccatacatcccacatgagggcaacagc
atttccgatatcaataaggcctgggagaggctggagaaggcagagcatgagcgggaggtg
gcactacgggaagagctgatccgccaagagaaactggaactgttagctcagcgttttgac
cacaaggcagcaatgagggaggcatggctgagtgagaaccaaaagctagtgtctcaggac
aactttggttatgatttaccagcagtggaagcggccatgaagaagcatgaggccattgaa
gcagacatctcttcctaccaggagcggatccaggttctagaggaattggctgtggaaatg
gagaaagaaaattactatgacatcaagcgcataaatgcacagaaagacaacatcttgcga
cagtggaaccttctgactgaattggtggaagctcgtcgccagcgcctggaacagaatagg
tccctccagaagatcttccaggaaatggtccatatgatcgactggatggaagagatgcag
gtgctagtggcatccaaggaccttgggaagcatctgttggaggtagaggaccttcggcag
aagcacagcctgctagaagcagacattgctgctcagacagagagagtcagtgctctcaat
gaagctgctctgaagtttacacaagtgcaaggttatcaaccatgtgaccctcaggtgatt
tgtaaccgggttaaccatgtgaaaacctgtatggaggagctgtgtgatcttgccatgaga
cgccatgtagaattggaggaatccagccagctttgggctttcttgcaagagatggaagag
acagaaagttgggtacgagagaaggagcagatactctcctctcagagctatgggaaggac
ttgagtagtgttatgaggcttatgagcaaacacaagattttaaccggggaattaggcagg
aggaggactctactgaaccaaactatgaagaaaggagagaagatcttggtcaagaaacgt
tttgaagtcaccaatatctgtgagaaaatcaaagaagtcagggttcagtggacaaagttg
gaggaaatgaccaccgtccatcaacagaaactccaggaagcctctaatttccaccaattc
agtgcggacacagatgacttggtggcttggctccaggacacttaccgtcttgtttctagt
gatgactttggccatgatgagtattcaacccagtctcttgtgaaaaagcacaaaggggta
gtggaagagattgagaagcatcgggcagtggtcttgtctttgcgtaaacatcttgccgtt
ctggcaccagagtaccgtgacttggtggatgtgcagatccgcattgtggaggtggagcag
ctctacagtgaggtggcagaagtggcagtcctgcgacggcagtggcttcaggatgctttg
gctgtctacaggatgttcagtgaagtgaatgcctgtgaggtctggattgatgagaaagaa
cagtggctaaataaaatggaggtaccagaaaagctggaagatgttgaggtggtccagcac
aggtttgagagtctagatcaggaaatgaacagtttaatgggacgtgtcctagacgtgaac
cagattgtgcaacaactggttgatggaggtcaccccagtgcttctgaagtcagagcttgt
caagaccatttgaatagcaggtggaacaagattgttgagcttgtcgaacggaagaaggat
cacttgaattccatcctgcgcatccagaactaccttctggaatgtactgagctgaagtcc
cagatctcagagaagaggaaagccatggagtgcacacagcccagcagcggtgacctaggt
ggagtcctttcccttcagcggaaactcttcaccatggaggctgccctggtggcgatagag
cctaagctgattgagctgcagcaggacgcagaagtgctggccactgcccacccagcccaa
gccctgggtattctgatgcagtttgaggagatcagtgaagagtgggaggcattgaagaag
accatgcagggctgtgaggactcgctgaccgtggccaccaggttgcagcagttcattcag
gacttggacaattttctcacctggcttgtcaagacccaggcagctgttgccacagaggag
ctgcccaataacctccaagaggctgagaaactcctaaatcaacatgcaaccctcaaagag
gagataaaccattacgaagaggagtataataagatccagactctgagtgagctgctgtct
ttggaggaagcggacattccctacctgtctctacaacagtggctccagaagctggaggca
ggctggaccaagctgctgctcatgtgggagagcaggcgggaggtccttgtgcagtctcac
atcttccacctctttttgcgcgatgtcaagcaggctgagatgtgtctgaacaaccaggaa
tctaccttggctcatatggaattgcccgacacagtggaagcagtggaaaaaaacataaaa
aagcacaaagatttcttgaccaccatggagctaaatgtacaaaagatcaaggtggctgtt
gatgctggggaagacctcatcaagtcagggaatatttacgccgacagagtccaggacagg
atcaatgccctgtggaagaggagccaacagaactttgacatggcacagcagtggctgcag
aatctgaatggtcatttggagctgcagcgattcctgcaggactgcagcgagctggatgac
tgggtcagccagaagatgctgatggcccacgagacttgcagggaccagacgcagaagccc
cacaagaaatggctcaggcaccaggccttcatagctgagctggctcagaataaagagtgg
ctggaaaagatacacaaggaaggttatcagctgattcaagaaaggccagagctggaaagt
gtggtgaagggcaaactagaggagattcagcaatactgggctgaactggagaacacgacc
caagccagggccaggcaactgtgcgaggccaataaggccgaacacctagcgcagaactac
ctggacttggacaagagactggcacacctggaagggcaacttcattatgtggaatctggc
agcgacataaccagtgtcaacaatcagttgaagaagctacagacaatggagaaccagatg
gaagagtggtgcaaggaagctggccagctgcaagcacatgtgtcttctcttccattggag
acttccagccaagaagcagtggaggagaaacagaatgcagtgggcaccagaattgtacgt
cttattgagcccttgaaagaaaggagaagaatcctactggccttcaaagaggtccatcaa
gtcagccatgatctagaggatgaaatttcctgggtccaagaaaggctcccccttgccatg
atgaaagaacatggaaacaacctgcagaaagtccagcagtttataaagaaaaaccagaac
cttcgcagggaagtacaggtgcacagatctcgtatggatgatgtgctggagcgggcggcg
gccattgcttcaattaagagtcctgaagctgaagaagtgcgactaagcctagagaagcta
aggcaactatgggacactctaagggaggaggtggagaggaggcagcagctactggatgcc
acctaccaggtccaacagtattactttgacgtggctgaggtggagacatggctcagtgaa
caggagttactcatgatgaatgatgagaaaggaaaggatgaacaaagtacgttacagctg
ctgaagaagcatcttatgctggagcagacgattgagaattatgaagagactattactcag
ctgtcgcgtcagtgccggtcccttctggaactggaccatcctgacagcgagcagataagt
aagcgccagtctcagattgaccggctgtacgtgtctctgaaggacctggtggaagaacgt
cgaggaaggctcgagcagcagtactggctcttccagctcaaccgagaagtggatgaactg
gaacactggattgccgagaaggaggtggtggcagggtctccagagcttggacaggactat
gaacatgtcacgctgctgcaggataaattcactgaatttgccagtgagacaggaaatgtt
ggacatgaacggatctctacggtgaatcagatggtggatgagctaatagactatggacat
acagatgctgcgaccatcgcagaatggaaagatggtgtaaacgaagcttgggctgagcta
ctggaactgatggaaactcgggcgcagatgctggcagcctctcatgaactccataaattt
ttcagtgactgcaaggatgctctgttccaaattgaggagaagaagcaacgacttccagtt
gtgactgctcaagagcccaaaacttgtgccaggagtctccagaggtcactgagctccttt
gagcaggatgttcagaacttggtttcccaggtgcagcagctacaggaaactgcagcccag
ttgaggatggtgtatgctggacccaatgctgaggccattgccttgaaggagcaggaggtg
gcacggtcttggaaagagcttctgacatcctgtgaggactgccgattgcagattagcacc
accacggataagatgcgcttccttggtatggcacgtgacctcatctcctggatggagagt
attatctgccagattggcactggagagaaacccagggacacatcttctgtggaggtgctc
atgtgttatcaccagggcctgaagggtgagattgaggctcgtaaccaggacatcgtgacc
tgcgtagacctggggaagacgctggtgctgaacaagagcccagccactgaggagatcaag
gcaagcctggaaaaattaatggtgaagaagaatgagatgactgggaaatgggaccagcac
tgggagtggctgcagcagatgctggaagtccatcagtttgcccaagaagctgtggtagct
gatgcttggctaacggcccaagagcccatattgaagagccgagagctaggcaatagtgtg
gatgaggtggaacaactgatccgtcggcatgaggctttccgtagaacggcagcagcctgg
gaagagcggttcagctccttgcgacgcctcaccacgttggaaaaattgaaagcagagcag
aacaaacagccagccacacccctgctgggacgtaaatttgctggggacccaccagaaggc
acagtcaaaacaccccaattactccattcaacactatatgcaaagtctgaggctagactt
gaaaagccagagtcgcagcctgtcctgaatggcattcttctagagccaaaggaaacaaaa
cctgaagggccagagccaacagtcgcctatgtgcagcaagaaatcaaaccagagcggctg
caaccaaaaatagaccatgtgcagaacaatatggaaccctccctagacatcaagtcccca
gaccttcaggaaaagtcagacatcaaagcaccagccaaggaaaggttcaaacctgacaag
ctagagcccaagctgctaacccaagaaacgcccggcacaaagagtgctgagagttcagaa
accaggcatggagagcgccggcgtgagagatatgaaaaaagactggagaggcaggaatcc
agtgagcaggagactccacggcaggagcaaatggaaaggagacgagagcgtcacgaacgg
aggttggaaagacaggagtccagtgagcaggagactcccagacatgaccaatctgaaaaa
aaagggaaggcgaccttggcagacattgtggaacagcttcaggagaaagaagcagcccag
tttcgtgaaagggagtctccagctcgcctactcaatggcattgacaagcttcctgagaga
acaccaaggccggacaggccccgagccagggatagaccaaagcccaggagaaggcctcgt
cccaaggatcctaaccagcccccaggagaagcacgacgctctcgctcagctccagcacag
agcagcgccccaccagccccaccaccgacccacactgttcagcaagaaggcttcctgttt
cgcaagcatgaactggaagggccaaataaaaaggcctcaaacagatcttgggtaaacctt
tactgcgtcgttagcaaaggtgatttaggaacttacaaggatgcaaagagtcacagctct
ggcagcacatatggcggggaacccttactgaacctgaacaatgccacatgtgatgttgcc
agtgactacaaaaaaaagaaacatgtcttcaaactgaggacacaggatggcaatgaattt
ctcttccaagcaaaggatgaggatgagatgaagacctggatccaggccatttcaagtgcc
gtctcagagcatgctgagattgctaggtggggtcaggcgctcctcaccacctcttccacc
gatgagggcaacctgaaacgagaccctgatcgcaggcccagtgcttccagcaggaagaaa
taa
DBGET
integrated database retrieval system
