Geotrypetes seraphini (Gaboon caecilian): 117364669
Help
Entry
117364669 CDS
T09159
Symbol
PPIL2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117364669 (PPIL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117364669 (PPIL2)
03110 Chaperones and folding catalysts [BR:
gsh03110
]
117364669 (PPIL2)
04121 Ubiquitin system [BR:
gsh04121
]
117364669 (PPIL2)
Enzymes [BR:
gsh01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
117364669 (PPIL2)
Spliceosome [BR:
gsh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117364669 (PPIL2)
Complex C
U4/U6.U5 tri-SnRNP related factors
117364669 (PPIL2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
117364669 (PPIL2)
Chaperones and folding catalysts [BR:
gsh03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
117364669 (PPIL2)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
U-box type E3
117364669 (PPIL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
SUB1_ProdP9
Motif
Other DBs
NCBI-GeneID:
117364669
NCBI-ProteinID:
XP_033810014
UniProt:
A0A6P8RWX6
LinkDB
All DBs
Position
8:complement(135538561..135724167)
Genome browser
AA seq
524 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTHFYGGKKADIPQTNFRRLPFDHCSLSLQPFEYPVCTPDGIV
FDLLSILPWIKKYGNNPITGEKLDAKSLTKLNFAKNQEGKYHCPVLFTVFTNNSHIVAIK
TSGNVYANEAIEQLNIKPKSYKDLLTDEPFTRQDIIILQDPTHLDKFNVSNFFHVKNNMK
VIDPDEERAKLDPSYHLRNTNLETQETLMELYQEYKGDELLAATMKDPEKKKVDKINAAH
YSTGTVSASFTSTAMTPKTMHEAAAIEDDVVRYQFVKKKGYVRLHTNKGDLNLELHCDKT
PKTCENFIKLCKKNYYDGTIFHRAIRNFVIQGGDPTGTGTGGESYWGKPFKDELKPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCTYLDKKHTVFGRVVGGFETLTAMENVDTDPKTD
RPKEEIRLESCTVFVDPYEEADSQVAAEREKALKEEEAEKAKAKPVLPKNDASQAPKTYR
QGIGKYINIAATKRLAESDGPSTSTAVASKKEKVSRGFEDFSSW
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaggcagcaccagaaggataagatgtacataacatgtgcagaatacacccat
ttctatggtggcaagaaggcagacattccacaaacaaatttcagacgtttgccttttgat
cattgcagtctgtctctccaaccctttgagtacccggtctgcacaccagatgggattgta
tttgatttgctgagcattcttccatggataaagaagtatggaaacaaccccattactgga
gagaagctggatgcaaaatctcttaccaagctgaactttgctaagaatcaagaaggtaaa
tatcattgtccagtgctatttacagtcttcaccaataactctcatatagtggccataaaa
acatcaggaaatgtctatgctaatgaggcaattgaacagttaaacattaaaccaaaaagc
tataaggacctcctgacagatgaaccttttacacggcaggacataatcattcttcaggac
cctactcatctggacaaatttaatgtctccaactttttccatgttaaaaacaacatgaag
gtgatagatccagatgaagagcgagcaaaattagatccctcctaccatctgaggaataca
aatttagagactcaagagactctgatggagttgtatcaagagtacaaaggagatgaactc
ttggcagccaccatgaaagatcctgagaagaaaaaagtggataagatcaatgcagcacat
tattccacagggactgtgagtgcttccttcacatccacagctatgaccccaaagaccatg
catgaagcagcggctattgaagatgatgtggtgcgttaccaattcgtgaagaagaaaggc
tatgtgaggcttcacacaaacaaaggagacctgaatctggaactgcactgcgacaagaca
ccaaaaacgtgtgagaactttatcaaactctgtaagaagaattattatgatggcacaata
tttcacagggccatccggaattttgtgattcaagggggtgatcctacaggaactggaaca
ggtggcgagtcatactggggaaagccttttaaagatgagcttaagccaaatctatcccat
acaggtcgtggggttctcagcatggccaattctggacccaataccaacaaatcccaattt
ttcatcacatttcgctcttgcacatatttggataaaaaacacacagtgttcgggagagtg
gttggcggttttgaaactctgacagccatggagaatgtagacactgacccaaaaacagat
cgccctaaggaggaaatccgtttagaaagctgcaccgtgtttgtggatccctatgaggaa
gctgacagtcaggttgctgcagagagagagaaggctttaaaagaagaggaagcagagaaa
gctaaagcaaagcctgtcctacctaagaacgatgccagtcaggctcccaaaacctaccgg
caggggattggaaagtacattaacatagctgcaacgaagcgcttggcagagtcggatggg
ccttcaaccagtacagctgtggccagtaagaaagagaaggttagccgaggctttgaggac
ttcagttcttggtaa
DBGET
integrated database retrieval system
