Geotrypetes seraphini (Gaboon caecilian): 117364714
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Entry
117364714 CDS
T09159
Symbol
CLIP1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117364714 (CLIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117364714 (CLIP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsh04812
]
117364714 (CLIP1)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117364714 (CLIP1)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
117364714 (CLIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
117364714
NCBI-ProteinID:
XP_033810119
UniProt:
A0A6P8RWJ1
LinkDB
All DBs
Position
8:155505584..155694474
Genome browser
AA seq
2178 aa
AA seq
DB search
MSLLKPSGLKAPSKIGKPGSTAPKTSASPPAASSGKAVSGEKPSSTSAAETQEEFVDDFR
IGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEACRGIFT
RPSKLSRKPLAENEANGTQTAPVSRATSPTSVSSTSVVSPPALSVATPVKPTMKEVVGNL
TKTASESMSNLSEAGSVKKAERELKMGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDE
PLGKNDGAVAGTRYFQCQTKYGLFAPVHKVTKIGFPSTTPAKAKTAVRKMVTTPSTPSAL
KRSPSASSISSMSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKEKQQHIEQL
LAERDLERAEVAKATSHVGEVEQELAVIRDGHDQYVMEMEAKMDQLRSMVEAADREKVEF
LNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQREL
EDTRVATVSEKSRIMELEKHLSLREKEVAELQQRLESAKPVGDVDTSLSLLKEITCLQEQ
IALANQEHQNEINKLKGSLENTEEAHKKEVNTMRTSMEKISKDNETLKSKLDHASKENAD
VIELWKSKLESAIVSHQEAMEELKFSFSKGMGAQTAEFFETKTQLEKLKLEHQNAVENLK
ISKDTERSALLKEIDALKSKHLEATEGKEKALEALRSKLESAEEQHLIEMEDALNKLQES
EIKVKELEALQVKCKEQTEVIDRFTAQIKATEEKLSNLDALQKANSEGKLEFQTLKEKLE
AAEVQIKKVETEMVSQSSKASEVAKELQERDEKLVSLEKQLADGSQVKDSLEKELQDWKK
KCTSNSEEVKSLEQTVQETLEKLNKKEETCASLSSELQEFKSQHAAMEKICKMGAEKEEQ
LTRAKAKLENQISEMIQSSGNSVAQLSKMNEELKNKERKLEELQAEFSKAAEKANSLQET
VDNLTVKAEQVLQDTHRKHQAELETMQNKLGTLENQIEKNLNQKKEVQILHEKAISEMTT
QHSEALAKVKLSMQEAEEMVKAAEKRTSDHEKQIEELEKQVKEGKSLTCELASAKRELEL
ISEEMRGLNSEKESLTQKGNALKLERDSLVAKLLELEHQLPFLQQDQAQLLSQNEELQLK
NERLVKAIQETEDKNQQAHLETEALMKEKSKQDSELENAKQELLKESLEKKDLQTSLMAI
NTQIKDQKQEMEDCKNKLAKENASLVEEKDQIIQNLRNSHEQLTKEHRKLAEDMAVAVAE
KNSFQEKHLEFEREAALLKREREDLLQTTESLRSEMQALLIKQKELHMTLEEYCKEKQAL
YEVKDALQTELDAINKQLDKSVRENAELQVSSDGLVKLLEEIKMSRNVTDCERIQLLQEK
EMLLYSEHRLLAEKEELSHENKAIAEKLQKSSNEAVLTQKVLKEDINNLRVEMELTCQKL
SELRKQHETTSEEKAALETKHTELLDDKRSLVTEITNLNVKLEREAATNKTLVQQNAQLM
GDIEIKTKSLQIAMQEKEELMSSNSNLSTLLQDIRSAKVNLESARANILHQKEILMADYE
KCCSQKENLAKNVVDVQEECTKLQVELQTVQKKLTKETEVVGAEKKHLLLELSDLRYRFD
LAVKEKEELTARMEDLLSQKQQLLCEKVKADSQLQEILKDKEGLACEREELTSSIEALKS
EYASLVKSNAELQDAHSSLSGILEDLRNSQEVAKSQQAKTLQIHQDLLAAHEKLLQDKEE
IQKEKEKLTEKNMMLCEELSLFSKSNSDIGAELQEQRSKSQALLKEKEELALQLKEFEAL
QCHTLMKETEAVQTAEEALHIVEQVSKEKEHLLQEKNTALTSLEESRQINRTLQSQVDTL
KQQNLKTEEELSQSKELFSLENKKMDDLRKETEELKLAATRKSQQLTALQEESAKLAEEL
GRSREEVTSIQKLEGERSVLNNQLLEMKKRNSVLKNEFDEEKDSLQQSINTSSALIIEKD
KELEKLRSEITLLRGETASTKTLQSIVESLESDKKKLEKKVKNLEQELGENKRQLNNVSS
ASGDALHSELQEEKLSTEGQHMIDFLNSVIVDLQRKNEDLKLKLEKMAEASLNGNSVENV
DNFESLNGTKKKPPPRLFCDICDCFDLHDTEDCPTQEQLPDSPPHSTHHGSRKEDRPYCN
ICEVFGHWTSNCNDDETF
NT seq
6537 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattaaaaccaagtgggctgaaagctccttctaaaataggcaagcctggaagt
acagcccctaaaacatcagcatctcctcctgctgcttcatcaggaaaggcagtgtcaggt
gaaaagccatcaagcacttcagctgctgaaacgcaagaagagtttgtggacgatttccga
attggggagcgagtgtgggtgaatggtaataaacctgggtttattcagtttcttggcgag
acacagtttgctccaggccaatgggcaggcatcgttttagatgagccaattggtaagaat
gatggctcggtggctggtgttcggtacttccagtgtgaagcctgtcgtggaatattcacg
agaccatcaaaactatcacgaaaaccgttagcagaaaatgaagccaatggcacacagact
gctcccgtgtctcgtgccacctcaccaacgtctgtgtcatcaactagtgtggtgtctccc
ccagctctctctgtagctacccctgtgaaaccaacaatgaaagaagtggtcggcaacctc
acaaaaacagccagtgaatccatgtcaaacctctctgaagctggatccgttaagaaggcg
gagagagaactcaaaatgggagatcgtgttttggtggggggaactaaagctggtgtggta
cggttcctgggtgagacagattttgctaaaggagaatggtgtggtgtggaattagatgaa
cctctgggaaagaatgatggtgctgtggctggaacaaggtattttcagtgccagacaaaa
tacggtttgtttgcacctgtacacaaagtaacgaagattggattcccatcaactacacca
gctaaagcaaagacagctgtaagaaaaatggttactaccccttcaacaccatctgccctg
aaacgaagtccaagtgcctcttccattagttccatgagttctgtggcatcatcagtaagc
agcaagcctagtcgcacaggactgttgacagaaacttcctctcgctatgcacgaaaaatt
tctggtaccacagctttgcaagaagctctcaaagagaagcagcagcacattgaacaactc
ctggctgaaagggacctggagcgcgctgaagttgctaaggcaaccagtcatgtgggagaa
gtggagcaggagctggcagtgattcgagatggtcacgatcagtatgtaatggaaatggaa
gcaaagatggatcagctgcggtctatggtggaagctgctgaccgcgagaaagtggagttt
ctcaatcagcttgaagaggagaagaggaaggtagaggatcttcagttccgtgtagaagaa
gaatccattaccaaaggagacctagagacgcagaccaaactggagcatgcccgcattaag
gagcttgaacagagcctgctctttgaaaagaccaaagctgacaagctccagagggagtta
gaagacactagggtggcaacagtttctgagaaatctcgcatcatggagctagaaaaacac
ctaagtctacgggaaaaggaagttgcagagcttcagcagagactagagtctgctaaacca
gttggagatgtggacacatctctttcactattgaaagaaattacatgtttgcaagaacag
attgcattagcaaaccaggagcaccagaatgagataaacaaactgaaaggaagtttagaa
aatactgaagaggctcataaaaaagaagtcaatacgatgagaactagtatggaaaagatt
tctaaagataatgaaactttgaaaagcaagctggaccatgccagcaaggagaatgcagat
gtgatagagctttggaagtcaaaactagagtctgctattgtttcacatcaagaagcaatg
gaagaacttaaattctctttcagtaaaggtatgggtgcccagactgctgaattctttgag
acgaagactcagttggaaaagcttaagttagaacaccaaaatgcagtagagaatttaaaa
attagcaaagatactgagagatctgctctactgaaagagattgatgctctgaagagtaag
catttagaagccacagaagggaaagaaaaagccctagaagccttgagatccaagctggaa
agtgcagaagagcagcacttgatagaaatggaagacgctttgaacaaattgcaggagagc
gaaataaaggtaaaggaactagaggcattgcaagtaaagtgcaaagagcaaacagaggtt
attgatagatttacagctcagatcaaggcaactgaagaaaagctttcaaatcttgatgca
ctacagaaagccaattctgagggtaaattggaatttcagacacttaaggagaagcttgag
gcagcagaggtgcaaataaagaaagtagaaactgagatggtctctcagagtagcaaggca
tctgaggtagccaaagaattacaagaacgagatgaaaagcttgttagtcttgagaaacag
ttggctgatgggagtcaggttaaggattctttggagaaggaactgcaggattggaaaaag
aagtgtaccagtaattctgaagaggtaaagagtctcgagcaaaccgttcaagaaacactt
gaaaagctaaacaaaaaagaagagacatgtgcatccctttcttcggaattgcaagaattc
aaatctcagcatgctgcaatggagaaaatatgtaaaatgggagcagaaaaagaagaacag
ttaactagagccaaagcaaaactggaaaatcagatatccgaaatgattcagtcttcaggg
aacagtgttgctcagcttagcaagatgaatgaagaattaaaaaacaaagagaggaagttg
gaagaattgcaagcagaattctcaaaggcagccgagaaggcaaattctctgcaagaaaca
gtggataatttaacagtcaaagctgagcaggttctgcaagacacgcacagaaaacatcaa
gccgagctggaaactatgcaaaacaagcttggaacactggaaaaccaaattgaaaaaaac
cttaatcaaaagaaggaggtgcaaatcctgcatgaaaaagccatttctgagatgaccact
cagcacagtgaggcacttgctaaagtaaagctgagcatgcaggaagctgaagagatggta
aaggctgcagaaaagaggaccagcgaccatgaaaagcaaattgaggagctagaaaagcaa
gtcaaagagggcaagtctttaacctgtgagttagcatcagccaaaagagagcttgaacta
atatcagaagagatgaggggtttgaattcagagaaggagagtctgacccagaagggaaat
gctttaaaattagagagagattccttggtagcaaagcttttagagctggaacatcaactt
ccattcttgcagcaagaccaggcacagctcttgtcacaaaatgaagaacttcaattaaaa
aatgaaaggcttgtaaaagcaatacaagagactgaagataaaaaccagcaagcgcacctt
gaaacagaagccttgatgaaagaaaaatcaaagcaggattcagaacttgaaaatgcaaag
caggagctcctaaaggaatccctagaaaagaaggatctgcagacttctttaatggccatc
aatactcaaataaaagatcaaaaacaagaaatggaggactgtaaaaacaagcttgccaaa
gaaaatgcaagtcttgttgaagaaaaagatcaaatcattcagaatctcagaaattcccac
gaacagctgacaaaagagcaccgaaaactggcagaagacatggcagttgctgttgcagaa
aagaattccttccaggagaagcatctagaatttgaacgtgaagctgcacttttaaaacgt
gagcgagaagacctcttgcaaaccactgaaagcctgcgatcagaaatgcaagcactcctg
attaagcaaaaagaattgcatatgactttagaagaatattgcaaagagaagcaggcgcta
tatgaggtaaaggatgcattgcaaacagagcttgatgcaatcaataagcagcttgacaaa
tctgtgagagagaatgcagagcttcaagtgtccagtgatggacttgtcaaacttcttgaa
gagattaagatgagcaggaatgtaacagactgtgaacggatccaattgctgcaagagaag
gaaatgctcctttattccgagcatagactgttagctgaaaaagaggaactttcacatgaa
aataaagcaatagctgaaaaacttcagaagtcttcaaatgaggctgttcttactcagaag
gtactgaaagaagacataaataatttgcgtgtagagatggaattaacctgtcaaaagctt
tctgagcttagaaagcagcatgaaactacttctgaagagaaggctgctttagaaaccaag
cacacagagctcctagatgataaacggtctcttgtaactgagataaccaacctaaacgtg
aagcttgagcgtgaagctgccactaataaaaccttggtgcagcagaatgcacagctcatg
ggtgacattgagatcaaaaccaaaagtcttcaaatagcaatgcaggaaaaagaagaactt
atgtcttctaattccaatctttcaacactccttcaagacattcgaagtgccaaagttaat
ttagaatcagcacgtgctaatatcttgcatcagaaggaaattttaatggctgattatgag
aagtgttgttcccagaaggaaaacttggccaaaaatgtggttgatgtacaagaagaatgt
acaaaattacaggtagaacttcaaactgtacagaaaaagctgacaaaagaaactgaagtt
gttggagcagaaaaaaagcatctgcttctagaactctcagatcttcgatacaggtttgac
ttggcagtaaaagaaaaagaagagttgactgcacgtatggaagaccttctatctcaaaaa
cagcagctgctttgcgaaaaagtaaaagctgattctcagctacaagaaattttgaaagac
aaggaagggctggcttgtgagagagaagaattgacatctagcatcgaggcactgaaaagt
gagtatgcgtcactagtgaaatctaatgcagagctgcaagatgcacacagcagtctctct
gggatcctggaggatttgcggaacagccaggaagtggcaaagtctcagcaagctaagaca
ctgcagatccaccaggatcttctcgctgctcatgaaaaactgctacaagataaagaagag
attcagaaagaaaaagaaaagctgactgaaaagaacatgatgctatgtgaggagctatct
ctcttttctaaaagcaacagtgatattggggcagagctacaagagcagcggagcaaatcc
caggctttgctgaaagaaaaggaagaacttgctttgcagttaaaagaatttgaggcactc
caatgccacacattaatgaaagagacagaggctgtacaaacagcagaagaagctttacat
attgtggagcaggtgtctaaagaaaaagagcaccttcttcaagaaaaaaatacagctctg
acctcattggaagaatctagacagataaatcggacactgcaaagccaagtagataccctt
aaacagcaaaaccttaaaactgaagaagaattgagccaatcaaaagaactctttagctta
gaaaataagaaaatggatgacttgaggaaagaaacggaagagctgaaactagcagccact
cggaaatcccagcagctgacagctttgcaagaagagagcgctaaacttgccgaggagcta
ggtaggagcagagaagaagtgacgagtattcaaaagcttgaaggtgaacgatctgtactc
aataaccagttgctagagatgaaaaaaagaaattcagtgttaaagaacgaatttgatgaa
gaaaaagattctttacagcagtccatcaatacttctagtgccttgattatagaaaaggat
aaagaacttgaaaaactcagaagtgagattacattgctccgtggagagactgcctcgaca
aaaactttgcagtccatagtggaatcactggaatctgataagaagaagttagaaaagaaa
gtgaaaaacctggagcaagaactcggtgaaaacaagagacagctcaataatgtatcaagt
gcctcaggtgatgctctccatagtgagcttcaagaagaaaagttatccacggaaggccag
catatgattgatttcctaaactcagtaatagtagacctgcaaaggaaaaatgaagatttg
aaattaaagctggaaaagatggcagaagcatctctcaatggcaacagtgtggaaaatgtg
gataattttgaaagcttgaatggtacaaagaagaaaccaccgcctcgccttttctgtgat
atctgtgactgctttgatctccatgacactgaagattgtccaacacaggaacagctgcca
gactctcctccccattccactcaccatgggagcagaaaagaagaccgcccgtattgtaac
atctgtgaagtgtttgggcactggacaagcaactgcaacgatgatgagaccttctga
DBGET
integrated database retrieval system
