Geotrypetes seraphini (Gaboon caecilian): 117364833
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Entry
117364833 CDS
T09159
Symbol
DHX34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117364833 (DHX34)
Enzymes [BR:
gsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117364833 (DHX34)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117364833 (DHX34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
AAA_16
ResIII
Motif
Other DBs
NCBI-GeneID:
117364833
NCBI-ProteinID:
XP_033810387
UniProt:
A0A6P8RXK2
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All DBs
Position
8:complement(48162404..48322794)
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AA seq
1147 aa
AA seq
DB search
MSSTKRTVSNKWDWNCLETRKKLEDAFFRDQDYIQSGTEESRDFWNFFDRFQRFQSIQKT
ERREEEKERKTGKGAHPGLADLPKDYDPRYRINMSVLSKDMEMRILGQGQKRTGRQKHSH
QSSGSERIPGEKVAEFRMAMLHFLDFTQKQGFAKLAKLQRERSGLPIAQYRDKIVEMVRE
HHVVVVAGDTGCGKSTQVPQYLLAAGFNRIACTQPRRIACISLAKRVGFESLNQYGSQVG
YQIRFESTRSPATKIVFLTEGLLLRQIQQEPELPKYQVLIVDEVHERHLHSDFLLGVLRQ
LLSLRRDLKVILMSATINIKLFSEYFHHAPVIQVPGRLYPIQVIFQPIPQEEMNSKLEKL
DVRPYLRVMQAIDHRYPPEERGDLLIFLSGVAEITAVLEAAQTYATHTKRWIALPLHSTL
SVAEQDKIFDMVPPGVRKCIVSTNIAETSVTIDGVRFVLDSGKVKEMSFDPKAKMQRLQE
FWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIQRVALDALVLQMKSMNL
GDPRTFPFIESPLTSSLETAILYLKDQGALDSAEHLTSIGSLLAKLPVDVVIGKILILGS
LFGLVEPILTIAAGLSVQSPFLRRAQNDPDCSTARKPLESEHGDPFTLLNVFNEWVQIKS
SKSANSRKWSRRRGLEEQRLYEMANLRRQFKELLKDHGLLEDPVSGPSDSYSRQKARRER
KQLYQLKRQHEETKGRKRKVLKLQDEDTVGSSSDEGGAAEVSGVGKANSVDIQDIKFKLR
HNVEELQASSSESWDPSGQHITLLKLIVCRGLYPQLALPDEFNASRKDSDQIFHTKNKAG
VVLHPTSVFSSNPELLQVDEIQDDCNRAGKDSMKNVSSHHQLLAFVSLLETNKPYLVNCV
RIPALQALLMLSRSLDTNADCSRIVVDGWIEIHVVESETALKLFSMAVQLRAAWEEALSL
QLAKQSSVDKEKGRERKKISALAWRLLDYIKSKAEYSIRRLAGVEMENLYIGPQTVPDNA
CLPGVFPSTMMKPDHIKGGYAVTSFLTYNCLTSNMDFYSECLRTFWTCPHCGLYMPFTPI
ERMSHEASCKPEEVAVDQGTVDPAEQTTRSASVLSLQRPYYCGICDKDFIFTSTEILKHR
RQHQQIL
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctacaaagagaacagtaagcaacaagtgggactggaattgtctggagactcga
aagaagttggaggatgccttttttagggatcaagattatatacagagtggcactgaggaa
agccgggacttctggaatttctttgaccgattccagaggtttcaaagcatccagaagact
gaacgaagagaggaggagaaggagaggaaaacagggaaaggtgcacatcctggactggca
gatctgcctaaggattatgatccgaggtacagaatcaatatgtcagttctaagcaaggac
atggaaatgcgcattttggggcaaggccagaagaggacaggacgccagaaacacagccat
cagagtagtggaagtgagcgtatccctggagaaaaagtggctgagtttcgaatggccatg
ttacatttcttggatttcactcagaagcagggctttgctaagttggccaaactgcaaagg
gaaagatctggactacccattgcccagtatcgggacaagatagtggaaatggtgagggag
caccatgtagtggtagtggctggggacacgggctgtggcaaatccacccaagttcctcaa
tatttgctggctgcaggatttaatcgcattgcctgtacccaaccacgcagaattgcttgc
atctctctagcaaagcgtgttggttttgaaagtctcaaccagtatggctctcaggttggg
taccaaattcgcttcgagagtacacggtctcctgccacaaagattgtgtttctcactgaa
ggcttgctgcttcgtcagatccaacaggagccagagctgccaaaataccaggtcctgata
gtggatgaagttcacgagcgacatctccacagtgatttcctgctgggagtactccgtcag
ctcttgtcactccgccgtgacctgaaggttatcctcatgtcggctacaattaatatcaag
ctcttctccgagtattttcaccatgcaccagtcatacaggttccgggacggctttaccct
atacaggtgatttttcagccgatcccccaggaagagatgaattcgaagttggagaagctg
gatgtaaggccttatctacgggtcatgcaagccattgatcaccgttacccaccggaggag
cgtggcgacctgcttatcttcctcagcggagtggcagaaatcacagcagtgctagaagca
gcgcagacctatgctactcacaccaagcggtggatcgctttgccactgcatagcacactt
tctgtggctgaacaggacaagatatttgatatggtcccacctggtgttcgaaaatgcatt
gtttccacaaacattgctgaaacttcagtcactatagatggagtgaggttcgtgctagac
tctggtaaagtgaaagaaatgagttttgaccccaaagccaagatgcagcgccttcaggag
ttttggatcagccgggcaagtgcagaacagcgtaagggccgagcaggccgcacaggacct
ggcgtctgctatcggctatatgctgaatctgactatgatgcctttgctccatatcctgtg
cccgagattcagagggttgccttggatgctttggtgctgcagatgaagagcatgaatttg
ggagatcctcgcactttccccttcatcgagagtcccctgacatctagccttgagacagcc
attctatatttgaaggatcagggcgctctggatagtgcagagcacctcacatccatcgga
agcttgctggcgaaactcccagttgatgttgtgatagggaaaatactgatacttggatcc
ctcttcggtttggtggagccgatccttactattgctgcaggtctgagtgttcagtcacca
ttccttcgcagggctcagaatgaccctgactgcagcactgctaggaagccactggaaagt
gagcatggagaccctttcacattgctcaatgtcttcaatgaatgggttcagattaaatcc
agcaagagtgccaactccaggaagtggagccggagacggggactggaggagcaacggcta
tatgagatggcaaatctgaggcgccaattcaaggagctactgaaagaccatggcctgctg
gaagacccagtctctggtcccagtgatagctatagtcggcagaaggcacgtagggaacgg
aaacagttgtaccagctgaagcgccagcacgaggagacaaagggtcgcaagcgcaaagtc
ctgaagctgcaggatgaagatactgtgggttcatccagtgacgaaggaggagctgctgag
gtgtcgggggtgggaaaagccaacagtgtggatattcaggatataaagtttaagctgcgc
cataacgtggaagaactacaggcctcatctagtgagtcctgggacccatctggacagcac
atcaccctgctgaagttgatagtatgcagggggctgtacccccagcttgctctccctgat
gagtttaacgccagccgtaaggattcagatcagatttttcacacaaaaaacaaagctgga
gtggttcttcatcccactagcgtgttctctagcaaccctgagctgctacaagtagatgaa
atccaggatgattgcaacagagctgggaaagattccatgaaaaatgtgagcagtcaccat
cagctgctggcatttgtgtctttgctagaaaccaataagccatacctagtgaactgtgtc
cggatcccagccttacaggcattactgatgctgtcacggtccctggatacgaatgcagat
tgcagccgcatagtggtggatggatggatagagatccatgttgttgagagtgagactgcg
ctgaagctattctctatggcagttcagctccgggcagcatgggaagaagcactcagcttg
cagctagcaaagcaatccagtgtggacaaagagaaggggagagaaaggaagaaaatctca
gccctggcttggagactgcttgactacataaaatccaaggcagagtatagtattcgcagg
ctggctggagtagagatggagaacctttacataggaccacaaactgtacccgataatgcc
tgtcttccaggagtgtttcccagcaccatgatgaaacctgaccacatcaagggaggctat
gcagtcaccagcttcttgacctataactgtctaactagcaatatggatttctacagtgag
tgcttacgtaccttttggacttgccctcattgtggtttatatatgcccttcacccccatt
gagcgtatgagccatgaggccagctgtaaaccagaggaagtggcagtggatcaaggaaca
gtggatcctgcagagcagacgaccagaagtgcttccgtattgtcattgcaaaggccttat
tattgtggcatctgtgacaaagactttatattcacatcaacagagattttgaagcaccgg
aggcagcaccaacaaatcctttga
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integrated database retrieval system
