Geotrypetes seraphini (Gaboon caecilian): 117365034
Help
Entry
117365034 CDS
T09159
Symbol
SRRM1
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03013
Nucleocytoplasmic transport
gsh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117365034 (SRRM1)
03015 mRNA surveillance pathway
117365034 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117365034 (SRRM1)
03041 Spliceosome [BR:
gsh03041
]
117365034 (SRRM1)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117365034 (SRRM1)
Spliceosome [BR:
gsh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
117365034 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
117365034
NCBI-ProteinID:
XP_033810783
UniProt:
A0A6P8S047
LinkDB
All DBs
Position
8:33905504..34004107
Genome browser
AA seq
918 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMGKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASIKKQDEDKDKRDKDDKESREKRDRSRSPRRRKSRSSS
RRRSPVKRERKRSHSRSPPHKAKSRSASPVPEKKEQEKPEPESSVKVRESSIQEATSTSD
IIKIPKLEPTSDMKDVSPERNAKKEREKEKERPRQKSRSRSKSRSRSRSRSPSHSRLRRR
HRSRSRSYSPRRRPSPRRRSSPRRRSPPRRMPPPPRHRRSRTPVRRRRRSSASLSGSSSS
SSSSRSRTPPPPKKPPKRISSSPPRKPRRSSPSASPPRRRHRPSPPPSPPPKPRRSPSPQ
RTRKSRGSVSPGRALAKHKVSEKRASPSPAPKPRKTDLSDSEDEKSGKMGAADSVQQRRQ
YRRQNQQSSSDSGSSSSSEDERPKKSNVKNGEVGRRRRHSASRSPSPRKRQKDSSPRMQS
GKRWQSPVAKRRRRSLSPPPARRRRTPSPVPPLRRRRTPSPPRRRSPSPPRRRSPSPRRY
SPPIQRRYSPSPPPKRRTSSPPHHPPPPPKRRSSPSPPAKHRVSHSPPPKQRSSPVTKKR
SPSVSSKHRKGSPPIRTSRETHSPPQNKRHSPSPRPRPQRSSASPPLLRGASPSPPRRQQ
SPSPSTRPIRRVSRTPEPKKISKASPSPQPVRRVSSSRSMSGSPEPAPKKLQQPLPQPPP
PSATSPSCSHSAKWSPPAPVNKAKSASPSPSPSRTSDQEGGGKKKKKKKEKKHKKEKKHK
KHKKHKKEKAAAAAAAATPTVAATAITTSSSELIEQEAEAIPKKESESEAEENLDDLEKH
LREKALRSMRKAQVSPQS
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggttcttccgcggtacgagtgcggagcaggacaatcgtttcagcaataaa
cagaagaaacttttgaagcagctgaaatttgcagaatgcctcgaaaaaaaggtagatatg
ggaaaagtaaacttggaagtgatcaaaccatggataaccaaacgagttacagaaattttg
ggttttgaggatgatgtagtgattgagtttatcttcaatcagctagaagtgaagaatcca
gactccaaaatgatgcagattaacttgactggtttcttaaatgggaaaaatgccagagag
ttcatgggagagctatggcccctgctcttaagtgcacaggaaaacattgcgggaattcct
tctgcttttttggagctgaagaaagaggaaataaagcaacgacagattgaacaagagaaa
ttggcttctataaaaaagcaagatgaagacaaggacaagagagataaagatgataaggaa
agcagagagaaaagggacagatcccgaagccctagaaggcgcaagtctagatcctcatca
agacgaagatccccagtcaaacgagagagaaagcgcagccattctcgatctcccccccat
aaagctaagagccggagtgcatccccagtgcctgaaaagaaagaacaggagaagcctgaa
ccagagtcttcagtcaaagtcagagagtcttctatccaagaggcaacatcaaccagtgat
ataatcaaaattcccaaacttgaacctacatcagatatgaaagatgtgtctccagaacga
aatgccaaaaaagagagagaaaaggagaaagagaggcctcgacaaaaatctcggtctcgc
tccaaatcgaggtcacgatctcgttcacgatcaccatctcattccagacttagaaggcgt
cataggtcacgatccagatcatactcccctcgaaggaggccaagtcccaggaggaggtca
tcaccgcgtagaagaagccccccaagacgtatgcctcccccacctcgacacaggagaagt
agaaccccagttcgaagaagacgtcgctcgtcagcttctctatctggcagcagcagctca
tcctcatcctcacgatcacggactcctccgccccctaagaaaccgcccaaaagaatttca
tccagcccaccacgcaaacctcgccgatcttctccttctgctagccctcccaggaggaga
cacagaccatctccacccccgagcccacctccgaaaccacgccgctcaccatctcctcag
cggacaaggaaaagccgtggttctgtgtccccaggaagagccctagcaaaacacaaagtt
agtgagaaaagggcatctccttcaccagcaccaaaacccaggaaaaccgacctctctgat
tcagaagatgaaaaaagtggaaagatgggtgcagcagactctgtgcagcagaggcgtcag
tacagaaggcagaatcaacagtcctcatctgattctggatcatcatcttcctcagaagat
gaaaggcctaaaaaatcaaatgtgaagaatggtgaagtaggaagacgacgacggcattct
gcctctcggagtccatcaccacggaaaaggcagaaagattcttcacctcggatgcagtcg
ggaaaaaggtggcagtcaccagttgctaaaaggagaaggaggagcctctcgccccctcca
gccagaaggcggcgcactccttcccctgttccacctctaaggcgacgtagaacaccctct
ccaccaagacgcaggtcgccatctcctccacgcagacgctctccttctcctcggaggtac
tctcctccaattcagaggaggtactctccttccccacctcctaaaaggagaacatcttca
cctccacatcaccctcctccacctcctaagcgaaggtcatctccctctcctccagccaag
catcgagtttcacattcaccaccaccaaaacagcgaagttctcccgtgacaaagaaacgt
tccccctcagtgtcttcaaagcataggaagggatcacctccaattagaaccagtcgtgaa
actcactctccgcctcaaaataaacggcattcaccctctccacggcctagaccccaacgg
agctctgcatcaccaccactgcttcggggagcttctccatccccaccacgaagacagcaa
tccccatctccaagcactagacctatccgcagggtgtcgaggactccagagcccaagaaa
ataagcaaggcatcaccaagtccacagcctgtgaggagagtgtcttcgtccaggtccatg
tcgggatcacctgagccagcacctaaaaaactacagcagccactgccgcagccgccacca
ccttctgcaacatctccttcctgctctcactcagccaagtggtcccctcctgcccctgtg
aataaagccaaaagcgcctcgccaagcccatctccgtcaaggacttccgaccaggaaggc
gggggcaagaaaaagaagaaaaagaaagagaaaaaacacaaaaaagagaaaaagcacaag
aaacacaaaaagcataagaaggagaaagctgctgctgccgccgccgccgccacccccacc
gttgccgcaaccgctataacaacgtcctcctctgaactgatagaacaggaagccgaggca
atacccaagaaagagtctgaaagcgaggcagaagaaaaccttgatgatttggagaagcac
ctgagggagaaggcattgcgctcaatgaggaaggctcaagtttccccgcagtcctag
DBGET
integrated database retrieval system
