Geotrypetes seraphini (Gaboon caecilian): 117365053
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Entry
117365053 CDS
T09159
Symbol
SAMD4B
Name
(RefSeq) protein Smaug homolog 2 isoform X1
KO
K27396
protein Smaug
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117365053 (SAMD4B)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117365053 (SAMD4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAT
SAM_1
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
117365053
NCBI-ProteinID:
XP_033810834
UniProt:
A0A6P8RZ60
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Position
8:18840468..18905701
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AA seq
717 aa
AA seq
DB search
MMFRDQVSVLSGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCNDIHILES
EANSAALISQWHQESKEKTLSLLLSHLPLLQPRNTEAKSEYMKLLQKVLAYSIENNTYIE
ESRQLLSYALIHPATTLEDRNSLALWLNHLEERLSGSFSSQGRGRLDTIYHPRQGSDEWQ
SNMDSGIGEVGHGWQEKPPRENGHLSFHSSTSVPSAINNIGSSTNSVLPCQLHPSPLKRS
MSLIPTSQQIPGDWMGIEEICTRTSFVNSEHAPLSPQNSMASSGSEQTEEQSSSRNTFQE
DGSGMKDVPTWLKSLRLHKYAALFSQMSYEEMMTLTEHHLESQLPFWYQPDDKIPNLDAA
IFCAGQNVTKGARHKIALSIQKLRERQSLLKSLEKDILEGGNLRNALQELQQVIITPIKT
YSPVQAPQKEGSAVEGQTAVGSKASLDKSSNEPDGKDTSTDGFQAQTTSPCDGESASAPI
PEGDIPGQLTRVMGKVCTQLLVSRPDEENITCYLHLLEKCLSHEAFTETQKKRLLSWKQQ
VLKLLRAFPRKAMLEMQGYRQQKGWAFGSNSLPIAGSVGVAVARRGPRQFQMPPRAIPPT
RMGMMSPAGIGGGVSPQHALNAPSIGNQGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPV
HSSPQAILMFPPASHSTLCADCQVPGTDLEINPTLESLCLSMTEHALGDGTDKTSTI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgtgaccaggtgagcgtgctttccggctggtttaagggctggaatgaatgt
gaacagacagtggccctgctctccctcctgaagcgcgtcactcgtacacaagcacgtttc
ctgcaattgtgcctggagcactcgctggcagactgcaatgatatccatatcctagaatcc
gaagccaacagcgctgccctcatcagccagtggcatcaagagtcaaaggagaagactctt
tcccttttgctgtcccatttgccgctgctccagcctcgcaacacagaagcaaagtcagag
tacatgaaactgctacaaaaagtgcttgcatattccattgagaacaacacgtatattgag
gaaagccgccagcttctgtcctatgcgctaatccacccggccaccacccttgaggaccgt
aattcgctggcactctggctgaaccatctggaagaacgtctgtcgggcagtttttccagc
cagggcagggggaggctagataccatctaccaccctcgtcagggctccgatgaatggcag
agcaacatggactctggcatcggagaagtaggacatggctggcaagagaagcctcccaga
gaaaatggacatttgagttttcattcttccacctcggtcccatctgctatcaataatatt
gggagcagcacaaactcagttcttccctgccagctgcaccccagtccactgaagcgttcc
atgtccctcatccccacaagccagcagattcccggtgactggatgggtatagaggaaatc
tgtacacgcacttcatttgtcaactcggagcatgcaccattgtctccgcagaacagtatg
gcatcctcaggcagtgagcagacagaggagcagagctccagccgcaacacatttcaggag
gatggcagtggcatgaaagatgttcccacctggctaaagagccttcgcttacacaaatat
gctgctctgttctcccagatgagttacgaagaaatgatgactcttacagagcatcacctg
gagtcacagttacccttctggtatcaacctgatgacaagattccaaatttagatgctgct
attttttgtgctggacagaatgtgaccaagggagcacgacacaaaatagcgctgagcatt
cagaagctgcgggagaggcagagcctgctgaagtcactggagaaggatattttggaaggg
ggtaatctgcggaatgcccttcaagagttacagcaggtaattattacccccatcaaaacc
tacagccctgtgcaggctcctcagaaggagggatctgcagtagaagggcagacggctgtt
ggttctaaagccagcttagacaagagcagcaatgagccagatggaaaagacaccagtact
gatggatttcaagcccagactacttccccttgtgatggagagtcggcatcagcacccatt
ccagaaggcgatattccagggcagctcaccagggttatgggtaaagtgtgtacacagctt
ctggtgtctcggccggatgaggagaacatcacttgttacctccaccttcttgaaaagtgt
ctgtcacatgaggcattcacagaaactcagaagaagaggctgttatcatggaagcagcag
gtgttgaagctactgagggcttttcctaggaaggcaatgctggagatgcagggatatcga
cagcagaaaggatgggctttcggctctaactcgctccccatagctggctctgtgggggtg
gcagtggcacgtagaggtccacgacagtttcagatgcccccaagagccatccccccaaca
cggatggggatgatgagcccagcagggattggtggaggggtttctccacagcatgcactg
aatgcaccaagcatagggaaccagggacggcagaatctatggtttgccaaccctggtggc
agtaacagtatgcctagccagagtcggagctctgttcagcgcacacactcgctgcccgtt
cactcatcaccacaggcaatccttatgttcccaccagcttcacattctactttgtgtgca
gactgccaggttcctggaacagacctggagataaatcctacgctggagtcgttgtgcctg
agtatgacggagcatgcacttggtgatggaacagacaagacctcaaccatctga
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