Geotrypetes seraphini (Gaboon caecilian): 117365058
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Entry
117365058 CDS
T09159
Symbol
DDX49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsh03009
]
117365058 (DDX49)
Enzymes [BR:
gsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117365058 (DDX49)
Ribosome biogenesis [BR:
gsh03009
]
Eukaryotic type
90S particles
Helicases
117365058 (DDX49)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P-loop_SecA
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
117365058
NCBI-ProteinID:
XP_033810850
UniProt:
A0A6P8RYG9
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All DBs
Position
8:115557908..115598119
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AA seq
481 aa
AA seq
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MDVVGFAALGLSAWLREQCAQLGINRPTPVQESCIPAILNGQDCMGCAKTGSGKTAAFVL
PILQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMGMVAQALELS
RKPHVVVATPGRLADHIRSSDTFTIKKIKFLVLDEADRLLEQGCTDFTKDLEVILRAIPA
QRQTLLFSATLTDTLEQLKTIAMNKPFFWESSSEVRTVDELDQRYLLVPEKVKDAYLVHL
IQKFQDEHEDWSIIIFTSTCKTCQILNMMLREFSFPSVALHSMMKQKQRFATLAKFKSSI
FKILIATDVAARGLDIPTVQVVINHNTPGLPKLYVHRVGRTARAGHHGIAITLVTQYDIH
LLHTIEEQIKIKLKDFAVDEGEVLKILTQVNVTRRECEIKLESTDFDEKKEKNKRKQLIL
EGKDPDLEAKRKAELEKIKREKQKFKDKIQETLQQRQEAQLQRKLQKKRERKQKQVVLVK
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggtggggttcgcggcacttggtctctcagcttggttgcgggagcagtgcgcg
cagctaggtatcaatcggccaacgcctgtgcaggagagctgtatcccggccatattgaac
ggtcaggattgcatgggttgtgccaagactggtagtgggaagacagctgcctttgtgctt
cccatcctgcagaagctctctgaggatccttatggcatcttctgtctcgtgctaacaccc
acaagggagctggcataccagatagcagagcagttccgagtgctggggaaacctttgggg
ctgaaagattgtattattgttgggggcatgggtatggtcgctcaagccttggaactttct
cggaagcctcatgttgttgtggcgactccaggacgcctggcagatcacatcaggagctct
gacactttcaccatcaaaaaaatcaaatttctggttttggatgaggcagatcgcctgctt
gagcagggctgcacggatttcacaaaggacctggaagtgatcctgcgtgcaatccccgca
cagcggcagacgctgcttttcagcgctacgctgacagacaccctggagcagctgaagacc
attgctatgaacaagcccttcttctgggagtccagttcagaggtgcggacagtggatgaa
ttggatcagcgatacctccttgtgccagagaaagttaaggatgcatatctggtccacttg
atccagaaatttcaggatgaacatgaggactggtccattatcatcttcacaagcacttgc
aagacctgccagattttgaacatgatgttgcgagaattcagtttcccatccgttgcactg
cattccatgatgaagcagaaacagagatttgcaactcttgccaaattcaagtccagcatt
ttcaagatacttattgcgactgacgtggctgcaagaggattagatattccaactgttcaa
gtggtgataaatcataacacacctgggctgccaaagctttatgttcatcgtgtaggccgc
acagctcgagcaggacaccacggaatcgctataaccctggtgacacagtatgacattcat
cttttgcacaccattgaagagcagattaaaataaaactaaaggatttcgctgtggacgag
ggtgaggtgctaaaaatcctgacccaagttaacgtgactcgtagggaatgtgaaatcaag
ctggaatctacggatttcgatgaaaagaaggaaaaaaataaaaggaagcaactgatctta
gagggaaaggatccagatctggaagcaaagagaaaagctgagctggaaaaaatcaagcga
gaaaaacaaaaattcaaagacaaaatccaggagacattgcaacagaggcaggaagcgcag
ctgcaaaggaagctccagaagaagagggagcgaaagcagaagcaggtggtcctggtgaag
gagtga
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