Geotrypetes seraphini (Gaboon caecilian): 117365136
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Entry
117365136 CDS
T09159
Symbol
SART1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117365136 (SART1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117365136 (SART1)
04121 Ubiquitin system [BR:
gsh04121
]
117365136 (SART1)
Spliceosome [BR:
gsh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
117365136 (SART1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
117365136 (SART1)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117365136 (SART1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
117365136
NCBI-ProteinID:
XP_033811022
UniProt:
A0A6P8RZP3
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Position
8:complement(1593946..1687534)
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AA seq
785 aa
AA seq
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MGSSKKHKTKEKAAVGAEEETASAPPRHREHKKHRHREKERRKRSHSPRERSRGGSGAGE
KRNRGGEEAGVSERRIKRERLDPGYQDVPGPKSASGDASLSIEETNKLRAKLGLKPLEIN
TVKNESGSKEDPVAAEVINPIVLKQQQELREKLAAAKEKRLLNQKLGKIKSLGEDELWLD
DTAAWIERSRMLQLEREMADKRAKLLEEMEEEFGISGLMKEEFRHAKESRYTAKDLQGLT
VEHNRDSFREGETIILTLKDKGVLDEEGSDVLLNVNLVDNEKARRNVELKKKKPEYKPYE
EEESVEDMAIFKQKTILSKYDEEIDGEKKKSFKLDSGGVADGSWEKELQSIRDALWQQAQ
TLDMPQLRQASEYYTPEEMVSFKKMRRRVKKIRKKEKKTVKANDLLPFCNDITDEDFGSR
QRGRGRRRRRLPEEEQEEKEAASAAFWEKLVQSDDMRVENMEISDEDEVEERNSSLAIDE
DEAELELQKQLERGRKLKQIQHMKDSGEKVLHMVRRLESCTNRDEDDNDLERKGNIIFNA
TSEFCRTLGEIPTYGLAGNREDQEDLMDFEHEEDRTSEQDVESDQEENLGWSTVNLDEEK
QQQDFSTSSTTILDEEPIVNRGLAAALLLCQNKGLLETTVQKVARVKAPNKTLLSAVYCI
EDKMAIDDKFSRREEYRGFTQEFKEKDSYKPDVKIEYVDETGRKLTQKEAFRQLSHRFHG
KGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQEKQKAQKTPYIVLSGSGKSMNA
NTITK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgggctcttcaaaaaagcacaagacaaaggaaaaggccgcagtcggggccgaggaagag
acggcatctgctcctccacgccatcgggaacataagaagcataggcaccgcgaaaaggag
cgaaggaagcgctcccacagcccgagggaacggagtcgagggggaagcggtgcaggagag
aagagaaaccgcggcggggaggaggctggagtcagcgagaggcgaatcaagcgcgaaaga
ctcgatcctggctatcaggatgttcctgggccgaagtctgcctctggtgatgcctcgctc
agcatcgaggaaactaacaaactacgagcaaagctaggtctgaaacctctggagataaat
acagtgaaaaatgaatctggcagtaaggaggatccagtggcagctgaagtaattaacccc
attgtcctgaagcaacagcaggagctacgggaaaagctggctgcagccaaggagaagcga
ctcttaaatcagaaactagggaagattaaatccttgggagaagatgagctctggctcgat
gatacagcagcctggattgaaagaagccgtatgctccagcttgaaagggagatggcagat
aaaagggcgaagcttctagaagaaatggaagaagaatttggaattagtggactcatgaag
gaggagttcaggcatgcaaaagagagtaggtacactgccaaagatcttcagggactaacg
gtggaacacaacagagactctttcagggaaggcgaaaccatcattcttaccctcaaagac
aaaggtgttctggatgaggaaggtagtgacgttctgctaaatgttaacttggtggataat
gagaaggccaggaggaacgtggagctgaagaaaaagaaaccagagtacaaaccatatgag
gaagaagagagtgtggaagacatggccatattcaagcagaagaccattctttccaaatat
gatgaggagattgatggggagaagaagaaatcattcaaactggattcaggaggggtggca
gatggctcctgggagaaagaattgcaaagcattcgagatgccctgtggcagcaggcccag
acactggatatgccacaactccgccaggcctcagagtactacacccctgaagaaatggtt
tccttcaaaaagatgagacggcgagtgaagaagatacgcaaaaaggagaaaaaaactgtg
aaggcaaatgacttgttgccattttgtaacgatattacagatgaagattttggatctaga
cagcgaggacgagggcggcggcggcggcgcctaccagaggaggaacaagaggagaaagaa
gcagcttcagctgcattctgggagaaactagtgcagtcagatgatatgcgtgtagagaac
atggaaataagtgatgaagatgaggtagaagagagaaactcctccctggctattgatgag
gatgaagccgagctggagctgcagaaacaactggagagagggaggaagctgaaacagatt
cagcacatgaaggatagtggtgagaaggttttgcacatggtgaggaggctagagtcatgc
acaaatcgggatgaggatgataatgacctggaaaggaaagggaatatcatcttcaatgcc
acctcagagttctgtcggactctgggagagatccctacttatggactagctggcaacagg
gaggaccaggaagacctcatggattttgagcatgaagaggataggacttctgagcaggat
gtggagtcagaccaagaagagaacctgggctggagtactgtcaacctagatgaagaaaag
cagcagcaggatttctcaacatcctctactaccatcctggatgaagaacccattgtgaac
aggggccttgctgctgcgcttctcttgtgtcagaacaaaggacttctggaaacaacagta
cagaaggtggcacgagtgaaagcaccgaacaaaacactgctctcagcagtatattgcatt
gaggataaaatggcaattgatgataagtttagtcgccgagaagagtacaggggcttcaca
caagagtttaaggaaaaggacagctacaagccagatgtgaagattgaatatgttgatgag
acaggcaggaagcttacacagaaggaggcctttcgacagctttcacatcgtttccatgga
aaaggctcagggaagatgaagacggagcgacgtatgaagaaactggatgaggaagcgctg
ttgaaaaagatgagttctagtgatacccccttgggcactgtggccctgctgcaagagaaa
cagaaggcccagaagacaccatacattgtgctgagtggaagtgggaagagcatgaatgca
aacaccatcaccaaatga
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