Geotrypetes seraphini (Gaboon caecilian): 117365217
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Entry
117365217 CDS
T09159
Symbol
SNRPA
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117365217 (SNRPA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117365217 (SNRPA)
Spliceosome [BR:
gsh03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
117365217 (SNRPA)
Complex B
117365217 (SNRPA)
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Paralog
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Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
117365217
NCBI-ProteinID:
XP_033811211
UniProt:
A0A6P8S2C8
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Position
8:54707579..54729734
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AA seq
277 aa
AA seq
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MAGPDVRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFK
EITSATNALRSMQGFPFYDKPMRIQYSKSDSDIIAKMKGTYVERDRKREKKKVKVPEIPV
KKTIPGAPGPVVGAVPGPMPGIPPMSQAPRMMHMPGQPPYMTHGMMPMPGMAPGQMMGGG
MPPGQMMPGQMAPSQISENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHD
IAFVEFEDDVQAGAAREALQGFKITQSNAMKISFAKK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggctggaccagacgttcgtcccaatcatacaatttatatcaacaatctgaatgagaag
atcaagaaagatgaactcaagaagtccctctatgccattttctcccagtttggtcagatc
ctggatatcttggtgtctcggagtttgaagatgaggggtcaggcgtttgttatattcaaa
gaaataacaagtgcgaccaatgcgctgagatctatgcaaggttttcccttctacgacaaa
cctatgaggatccaatattccaagtccgattctgacatcattgcaaagatgaagggtact
tatgtagagcgagacaggaagcgagagaagaagaaggtgaaggtgccagagatacctgtc
aagaagaccatacctggggctcctggtccagtggttggtgctgtcccaggacccatgcct
ggtatacccccaatgtcccaggctccacgtatgatgcacatgccaggacagcccccatac
atgactcatggaatgatgcctatgccaggtatggctcctggacaaatgatgggtggtggc
atgcctcctggacagatgatgcccggtcagatggctccgtcccagatatcggagaatcca
ccaaatcatatcctcttccttaccaacctgccagaagagaccaatgagctgatgttgtca
atgctgttcaaccagttccctgggttcaaggaggtacgtttggtccctggccggcatgac
attgcctttgtggagtttgaagatgatgtacaggcaggagcagcacgggaggccttgcag
ggcttcaagatcacacagtccaatgctatgaagatctcctttgccaagaaataa
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