KEGG   Geotrypetes seraphini (Gaboon caecilian): 117365222
Entry
117365222         CDS       T09159                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gsh03036]
    117365222 (KDM4B)
Enzymes [BR:gsh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     117365222 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     117365222 (KDM4B)
Chromosome and associated proteins [BR:gsh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117365222 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H JmjN PHD LBR_tudor DUF4537 YscO
Other DBs
NCBI-GeneID: 117365222
NCBI-ProteinID: XP_033811224
UniProt: A0A6P8RZI6
LinkDB
Position
8:complement(106068532..106422792)
AA seq 1108 aa
MGSESPCPQNPGCKIMTFRPTLEEFQDFGKYIAFIESQGAHRAGLAKVIPPKEWKPRKTY
DDIDNMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGDYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDSDVNLWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVKVLQPDRYELWKQGRDNTLLDHLKPTALSCPELEAWNE
TKALLKAKLIRRSYRKRTQPRRHKTEDQKSLREVMAMASGLKDEKIKEESRECTDMEEEQ
DKQLSCCRGVTPTTSKARFTGTKGIRGRGRPPKSKNDGKNKKEQQHLKEINASTAPITQT
PAMSMQAALATGAQLAVAEAEAAAAVALGENTASALVNITPSEGASEEEDIKSRPIIPML
YVVPKTKKVVCDKERMSCHQAFKKFASYKDQIWKELPALSDLSVKQEDGGEANAMRIGTG
ATEIQCVFLQKPTTFSKMKMEIKKSRRHPLGRPPTRSPLSVVKQEASSDDEAVPFSGEED
VSDPETLKSLLSHLWKNKALNFMTERRFNSAAAMIEPYCAICTLFCPYNQLGKETNRDTQ
SLGETTSMISASKCGQKAKPLIPEMCFTSSRGNIEPLPANSYIDEDGTSLLISCAKCCMQ
VHASCYGIRPDLVSEGWRCSRCTANAWTADCCLCNLRGGALQMTTDGRWVHVICAIAVPE
VHFLNVIERHPVDITAIPEQRCQLKCVYCWKRTKKVSGACIQCSVDHCSTSFHVTCAHSA
GISMEPDDWPYVVSITCFKHKAASQNVQLMKEVSLGQTVISKNRNGLYYRCKVIGMATQT
FYEVNFEDGSYSDNVYPESIMSRDCVKHGPPSEGELVRLQWADGNLYNGKFIAAQISHVY
QVEFEDGFQLMVKRSDIFTLMEQLPKRVKSRLSLSTGAPQEDIFSGDQAKIAKRPRVSNP
ERYGQSTNYFSLMEALRQCHPGPQSNMF
NT seq 3327 nt   +upstreamnt  +downstreamnt
atgggatcagaaagtccttgtcctcagaatcctggttgtaagattatgacattccgacct
accctggaggaattccaggactttgggaagtatatcgctttcatcgagtcccaaggagca
catagggctggacttgctaaggttatacctcctaaggagtggaagccccgtaaaacatat
gatgatattgacaacatggtgattcctgcacccatccagcaagtggtgactgggcaatct
ggcttgttcacccagtacaatatacagaagaagcctatgactgtgggagattaccgccgc
ttggcaaacagtgaaaagtattgcacgccacgccaccaagattttgaggacctggagcgc
aaatattggaagaatctaacatttgtatctcccatttatggagcagacataagtggttca
ttatatgattcggatgtgaatctgtggaacattggaaatctgaataccctcctagatatg
gtggagcatgaatgtgggatcatcattgaaggtgtcaacaccccctacctgtactttggc
atgtggaagacaacatttgcatggcatacagaagatatggatctgtatagcatcaactac
ctgcactttggggagcccaaatcctggtatgcaatccctccagagcatggtaaacgtctt
gaacgcctggcaaaaggattttttcctggaagttcacaagggtgtgatgcttttcttcga
cataagatgacactgatttcaccctccatcctgaagaaatatggtatcccttttgatcgg
ataacccaagaggctggagaattcatgataacatttccatatggttatcatgctggattc
aatcacggattcaactgtgccgagtctacaaattttgctacactgcgatggattgactat
ggcaaaatggccactcagtgtacttgccggaaggatatggttaagatttcaatggatgtc
tttgtgaaagttcttcagccggaccgctatgagctctggaagcaaggcagagacaataca
ctactggaccacctgaaaccaactgcactgagctgtcctgagctggaagcatggaatgag
actaaagctttactaaaagccaagcttattcggaggtcatatagaaaacgcactcaaccc
aggaggcataaaacggaggaccagaagtcactgagagaagtcatggccatggcttccggt
ttgaaagatgagaagataaaagaagagtctagagagtgcacagacatggaggaagagcaa
gacaagcagctaagctgctgtagaggagtcactccaactacatccaaagcgcgtttcact
ggaacgaaagggatcagaggtagaggcagaccaccaaaatcaaaaaatgacgggaaaaat
aaaaaagaacagcagcatctcaaagaaataaatgcctcaactgcccctataacacaaact
ccagcaatgtctatgcaggcggcactggcaacaggcgcacaactagcagtagctgaagca
gaggcagcagcagcagtcgccttgggagagaacactgcctctgctcttgtcaacataact
ccttcagagggggcaagcgaggaagaagacatcaagtcccggccaattattcctatgctc
tatgtagtccccaaaacaaaaaaagttgtgtgtgataaggaacggatgtcctgtcatcaa
gcattcaagaagtttgccagctataaagatcagatatggaaggagcttcctgccttgtca
gacctctcggtgaagcaagaagatggtggagaagcaaatgcaatgcgtattggcacagga
gctactgaaatacagtgtgtgttcttgcagaagccgaccacattttcaaagatgaagatg
gagattaagaaatctcgtcgtcatccgctgggaagacctccaactcgctccccactatca
gttgttaagcaggaagcctcaagtgatgacgaagctgttccgttctctggtgaggaggat
gtgagtgatccagagactctgaaatctttactctctcacctgtggaagaataaagcacta
aacttcatgactgagaggagattcaattcagcagctgctatgattgagccatactgtgct
atctgtactctcttctgtccctataatcagctgggcaaggaaacaaaccgggatactcag
tctcttggagagaccacttccatgatctcagcatccaagtgtggacaaaaggcaaagcca
ctgatcccagaaatgtgcttcacatccagcagagggaacattgagcctcttcctgccaac
tcatacattgacgaggatggaaccagcctgcttatctcttgtgccaagtgctgtatgcaa
gttcatgctagttgctatgggattcgacctgatcttgtgagtgaaggctggaggtgctca
cgatgtacagctaatgcatggacagcagactgctgtctatgtaatttgagaggaggtgca
ctacagatgacaacggacgggaggtgggtccatgttatctgcgctattgcagtccctgaa
gtccatttccttaatgtaattgagcgtcatcctgtggacatcactgccattccagaacag
aggtgccagctgaaatgtgtttactgctggaagcgaacaaagaaagtgtctggtgcctgc
attcagtgttcagttgaccactgctctacatcatttcatgtcacctgtgcacattctgct
gggatttccatggagccagatgattggccctatgttgtgtccatcacttgctttaagcac
aaagcagctagtcagaatgtccagctaatgaaggaagtttccttgggtcagacagtgatc
agcaagaatcgaaatggtctttactataggtgcaaagtgattggaatggcaacacaaacc
ttctacgaagtaaactttgaagatggctcatacagtgataatgtgtatccagagagcatc
atgagtcgagattgtgtcaaacatggaccaccatcagagggagagcttgtgcggctccaa
tgggctgatggaaatctctataatggcaagttcattgcagcccagattagtcatgtctat
caggtggagtttgaggatggctttcaattaatggtaaaacgaagtgatatctttacattg
atggaacagcttcccaaaagagtgaaatctcgactgtcactcagcactggggccccccag
gaagatatattctcaggtgatcaggcaaagatagccaagcgtccacgagtgtcgaatcct
gagagatatggacagagtacaaattacttttccttgatggaggctctaaggcagtgccat
ccaggaccccaaagcaacatgttttaa

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