Geotrypetes seraphini (Gaboon caecilian): 117365404
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Entry
117365404 CDS
T09159
Symbol
WDTC1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117365404 (WDTC1)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117365404 (WDTC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
TPR_2
TPR_19
TPR_16
TPR_1
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
TPR_17
TPR_11
ANAPC3
TPR_6
TPR_14
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_IFT122_1st
Barstar
Motif
Other DBs
NCBI-GeneID:
117365404
NCBI-ProteinID:
XP_033811705
UniProt:
A0A6P8S0S5
LinkDB
All DBs
Position
8:5691198..5748806
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AA seq
670 aa
AA seq
DB search
MAKVNIAKDLIRRQIKERGALRFERHYHVTDPFIRRLGLETELQGHAGCVNCLEWNEKGD
LLASGSDDQHTIVWDPFHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHD
LTAKETIHMFGDHTNRVKRVATAPMWPNTFWSAAEDGLIRQYDLRESSKRSEVLIDLTEY
CGQLVEAKCLTVNPQDNNYLAVGASGPFVRIYDIRMIHNHRKNLKQSPLTAVHTFCDRQK
PIPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTFK
QRPYTFLLPRKCHSIEIQNGKTSTNGVSNGIHLHSNGFRLAEGKAHISSQMELPPHLEKV
KQRANDAFARQQWSQAIELYSQAVQKAPSSAMLYGNRAAAYMKRKWDGDHYDALRDCLKA
ISLNPLHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALDQDIKAALFS
KSDSSDDKKSGDSVRVRTTGRKDSISEDEMVLRERSYDYKHRYCGHCNTTTDIKEANFFG
SNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLW
NPRPESEDINGRVVEDMEGASQANQRRMNADPLEVMLLNMGYRITGLSSGGPGGSDDEDS
SEGQVQCRPS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtaaacattgcaaaagacctcatccgtcggcagatcaaggagagaggtgcg
ctaaggtttgagaggcattatcatgtcacagatcctttcatcagacggctgggcctggag
acggagctacagggtcatgcaggatgtgtaaactgcttggaatggaacgaaaaaggagat
ttactagcatctggctctgatgaccaacatactatcgtctgggatcccttccatcataag
aagttgctgtccatgcacactggccacacagcaaacatcttctccgtcaagttcctgcca
catgctggtgatagaatcctaatcacaggtgcggccgactccaaagtgcatgtacacgat
ctgactgctaaagaaacgatccacatgtttggagatcacacgaacagggtgaagcgtgtt
gccacagcaccaatgtggcctaacactttctggagtgcagcagaggatgggctgatcagg
cagtatgacctccgagagagcagcaagcgctctgaagtgctaattgatctgacagagtac
tgtggacagctggtagaggcaaagtgcctcactgtcaatccccaagacaacaactaccta
gcagtgggagccagtgggcccttcgttcggatctatgacatccgcatgatccataaccac
aggaaaaacctaaagcagagtcctttgactgcagtccacactttttgtgacagacagaaa
cccatcccagatggagctgcacagtactatgtagcaggacaccttcctgtgaaactgcct
gactataacaaccgtctgcgtgtcctagtagctacatatgtgactttcagcccagatggg
acagaattgctagttaatatgggaggcgagcaggtatatttatttgacctgacatttaaa
cagcgaccatacacttttctcctgccaaggaagtgccattctattgaaatacagaatgga
aaaacctcaaccaatggtgtgtcaaatggaatccatcttcatagcaatggattcagattg
gcagaaggaaaagcacatataagctcacagatggagcttcctccccacctggagaaagtg
aaacaacgagccaatgatgcctttgcccgccagcagtggagccaagccattgaactgtac
agccaagctgttcagaaagcccccagcagcgctatgctttatggaaaccgtgctgcagcc
tatatgaagcgcaagtgggatggggatcattatgatgctctccgggactgcctgaaggcc
atctcgctcaatcctttgcacctgaaggcccacttccgcctggctcgttgcctttttgag
ctcaagtatgtggctgaagcgttggaatgcctagatgactttaaagggaagttccctgaa
caggcccacagcagtgcttgtgatgcactggaccaagatatcaaagcagctctcttctcc
aaaagtgacagctctgatgataagaaaagtggagactcggttcgagtccgaacaactggg
cggaaggattccatctcggaggatgaaatggtgctgagggaaagaagttacgactacaaa
cacagatactgcggccactgtaataccactactgacatcaaagaggccaacttctttggc
agcaatgcacagtacattgtcagtggttctgacgatggctccttcttcatctgggaaaaa
gaaacgaccaaccttgtgcgagttctgcagggagacgaatctatcgtcaactgcctccaa
ccccatcccagctactgctttctggcaactagtggcattgacccggtagtgaggttgtgg
aaccctagaccagagagtgaagatattaatggacgtgtggtagaagatatggaaggggct
tcacaggctaaccagaggcgaatgaatgcagaccccctggaagtgatgttgcttaacatg
ggctaccggatcacaggactgtctagtggggggccaggtggctcagatgatgaagatagc
tccgaagggcaagttcagtgccggcccagctaa
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