Geotrypetes seraphini (Gaboon caecilian): 117365442
Help
Entry
117365442 CDS
T09159
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03030
DNA replication
gsh03410
Base excision repair
gsh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117365442 (POLE)
03410 Base excision repair
117365442 (POLE)
03420 Nucleotide excision repair
117365442 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsh03032
]
117365442 (POLE)
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117365442 (POLE)
Enzymes [BR:
gsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117365442 (POLE)
DNA replication proteins [BR:
gsh03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
117365442 (POLE)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
117365442 (POLE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
117365442
NCBI-ProteinID:
XP_033811806
UniProt:
A0A6P8S4A6
LinkDB
All DBs
Position
8:complement(177659708..177896673)
Genome browser
AA seq
2287 aa
AA seq
DB search
MVLQNSGRLRAEARGEGALQQDDGSSTSAAKRLERSQWTDKMDAVFGFERMKELGEKTGW
LINMHPTEILDEDKRLISSVDYYFIQEDGSRFKVALPYKPYFYIATRKGCEREVSSFLSK
KFQGKIAKLETVPKEDLDLPNHLVGLKRNYIRLAFHTVDDLVKVRKEISPAVRKNKERDH
ANDTYTAMLSSALAGSSMAGEEKGTSKKIADQMDNILDMREYDVPYHVRLSIDLKIHVAH
WYNVRYRGNVYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAESDQIMMISYMIDG
QGYLITNREIVSEDIEDFEFTPKPEYEGPFCIFNEPDEAHLIQRWFEHVQETKPNIIVTY
NGDFFDWPFVETRASVHGMNMYQEIGFQKDTQGEYKSTSCIHMDCLRWVKRDSYLPVGSH
NLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALC
TIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQIFNKLTNDGHVLDSETYVGG
HVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHAIEEEEKLSLEHVTNFQEVCDD
IKQKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGAN
CQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDRPPRAFHELSREEQAKYEKKR
LADYCRKAYKKIHVTRLEDRVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAA
LESGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGANI
ITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNSKKPKVAISYPGAMLNILVK
EGFTNHQYQELVDPTSLNYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNED
GSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYASVAKVADYWLDVLYSKAA
NMPDSELFELISENRSMSRKLEDYGEQKSTSISTARRLAEFLGDQMVKDAGLSCRFVISR
KPEGSPVTERAIPLAIFQAETSVKKHYLRKWLKNSSLQDLDIRAILDWDYYIERLGSAIQ
KIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFVSEGKRQISANQLSA
NLQPSQLADMEDFGVAKRLHPTVPISSKRKRVPLAEENQQETQDMELTQSWREILGPLPP
IGITKDERLVWLRYHKKKWELQAKQRRERRKRRRLLDGEALPSGGGVIRDGPSAGLGGFL
RKTARSILDMPWQIVQIGETSQLGLFRLWAVIGSDLHCMKLSIPRVFYVNQRIIKPEEGA
VYRKVNRILPRSNPIYNLYEYSVPEDVYRQHINEIHAELSAPDIEGVYETQVPLMLRSLV
QLGCVCMVNKQLVRHLMGREAETFDLEHLEMKSLAQFSYLEPGSIRHIYFYHNSQGNKAL
FGLFIPSQRKAAVFVMDTVRSNQMPNLNSMYSAEHSALMEKVGQDLLPPEKHNFEVRAET
DPKTVFRAIQRLLLGYKDERRGPTLIAVQSNWELKRLTNGMPVFEEFPLVPVRVTDDIGY
NILDWQRHGARRMIRHYLNLDSCLSQAFEMARYYHIPVGNLPDDISMFGSDLFFSRHLCR
HNHLLWQSPTSRPDLGGKEADDNRLVMEFDDKASVEINNSGCYSTVCVELDIQSLAVNTI
LQSHHINDMEGASSMGISFDVIQQASLEEMMTGNQAASALASYDETALCSNTFRILKSMV
VGWVKEITQYHNVYADNQVMHFYRWLGSPSSLLYDPALHRTLHGMMKKLFLQLVAEFKRL
GSSVIYANFNRIILCTKKRRIEDAIAYVDYITKSIHSREIFHSLTISLSRCWEFLLWMDP
ANYGGIKGKIPSSVQYGEKEKEGNREDNEGNEEEDEEEIHSEDEDTKDDVEDSLENNWNI
VQYLPQAASCQSYFLMIVSAYIVAVYHSMREEMKRNAPGCTPIKRKQTSQISQEAEADAG
AMPGMITFSQDYVANELTQSFFTIAQKIQKKVTGTRHVTEPSEMFPVLPGSYLPLNNPAL
EFIKYVCKVLSLDTNITNQVNKLKRDLLRLIDTGEFSEDAQFKDPCRSYILSEVICRNCN
FCRDLDLCKDPSTLQDGSALPKWICTNCQAAYDSESIEMALVEVLQKKLMAFTLQDLVCL
KCKGVKEANMPIYCSCAGDFDLTISTKVFVEQISVFRNIARHYNMPYLLEMIEWLLQMNP
HITLTRK
NT seq
6864 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcagaacagcgggcggctgcgggcagaggcccgcggggagggcgcgcttcag
caggacgatggctcctcaacttctgctgccaagcgcctggagcgcagtcagtggacagac
aaaatggatgctgtgtttggttttgagcggatgaaggaactcggagagaagactggctgg
ctgatcaacatgcacccgacagaaattttggatgaggataagcgtctcattagctccgtg
gattattacttcattcaagaagatggaagtagatttaaggtggctctaccctacaagcca
tacttctacattgcaacaaggaagggatgtgaacgagaggtctcatcttttctgtccaag
aagtttcagggtaaaatagcaaaactggaaactgttccaaaggaggatctggacctgcca
aatcatcttgtgggactcaagaggaattacatccgtttggcctttcacacggtagatgat
ttagtgaaagtgcggaaagaaatttctcctgctgtgaggaaaaacaaggagcgggatcat
gccaatgacacctacacagccatgctgtccagcgcgctcgctggcagcagtatggcagga
gaggagaagggcacttctaagaagattgccgatcaaatggataacatcctggacatgcgg
gaatacgatgttccgtaccatgtgcgactgtctattgacttaaagatccatgtggcacat
tggtataacgttcgatatcgaggaaatgtctatcctcctgaaattgttcgtcgggatgac
ctagtagagcggccagatccggttgttttggcttttgacattgaaactactaaactgcct
ttgaagttcccagatgcagagtcggaccagatcatgatgatctcgtatatgattgatgga
cagggatacctgatcaccaacagagagattgtctccgaggatattgaagattttgaattt
actcccaagcctgaatatgaggggcccttctgtattttcaatgagccagatgaggcacat
ttgatccaaagatggtttgaacacgtccaggaaactaagcctaacattattgtgacatac
aacggggacttctttgactggccttttgtagaaacaagagcctctgttcatggcatgaac
atgtaccaagagattggattccaaaaagatactcagggggaatataaatctacctcctgc
atccacatggattgtctcaggtgggtaaagagagacagctacctcccggtgggaagccac
aaccttaaagcagcagctaaagccaagctgggttatgacccggtagagctggatcctgaa
gagatgtgtcgaatggccacagaggaacctcagactttggccacgtactcggtctctgat
gctgttgctacatattacatgtatatgaagtatgtccatcctttcatctttgccctgtgc
accatcattcccatggagcccgatgaggtattacgaaagggctcggggacactgtgtgaa
gcattgttgatggtccaagcatatcacgcgaatatcatcttcccaaataaacaagagcag
attttcaataagctgacaaatgatgggcatgtactggactctgagacttatgtgggaggt
catgtggaggctctggagtctggagtatttcgcagtgacattccctgccgctttaaaatg
aacccagccgcttttgactttctcctgcagcgagtggagaagaccatgcggcatgccatt
gaggaggaagagaagctttctctggagcatgtcaccaatttccaggaagtgtgtgatgat
atcaagcagaaactgacttccttgaaagaggtaccaaaccgaattgagtgtcccctcatt
tatcacctggatgtgggcgcaatgtaccccaatatcatcctcaccaaccggctacagccc
tctgccatggtggatgaggccacttgtgccgcttgtgactttaataaaccaggagccaac
tgccagcgccggatgacatggcaatggagaggagagttcatgcctgcaagtcgcagtgag
taccaccgcatacagcagcagctggagtctgagaaatttccaccgctgttcccagatagg
ccaccacgtgcatttcatgaactgtctcgtgaggagcaagccaaatatgagaagaaacga
ctcgcagattattgccgaaaagcctataagaaaatccatgtcacaagactggaggatcgt
gttactaccatctgtcagcgggaaaactcgttttatgttgacactgtgcgagcatttcgg
gaccgccgctatgagttcaaggggttgcacaaggtctggaagaagaagctgtcagctgct
ctggagagtggagatgcagccgaagtgaagcgctgtaagaatatggagatcttgtacgaa
tctctgcagctggcacacaagtgcatcctgaattcattctatggatatgtaatgcgcaag
ggagcccgttggtattctatggaaatggctggaattgtttgctacactggagccaacatc
atcacacaggcccgtgagctgatagagcagattgggagaccgctggagctggacacagat
ggtatctggtgtgttcttcccaacagtttccctgaaaactttgtcatcaagtcaaccaac
tccaagaaaccaaaagtggccatctcatacccgggtgctatgctgaatattcttgtgaag
gaaggcttcacaaaccatcagtaccaggaactggttgacccaacctctctcaactatgtc
actcgctcagagaacagcatcttctttgaagtagatgggccttatctggccatgatcctc
ccagcctccaaggaggagggcaagaagctgaagaaaagatacgcagtgtttaatgaggat
ggatccttagctgagttaaaggggtttgaggtgaaacgacgtggagaactgcagctgatt
aagatctttcagtcctctgtttttgaggcatttttgaaaggttccaccctggaggaagtt
tatgcttcggtggccaaagtggctgactattggctcgatgttctgtacagcaaggcagcc
aatatgccagactcggagctattcgagctgatttcggagaatcgctcaatgtctcgtaag
ttggaggattacggggagcaaaagtccacctccatcagtacagccagacgcttggcagaa
tttcttggggaccagatggtgaaagatgctgggctgagctgtcgctttgttatatcccga
aaaccagagggttcacccgtcactgaaagggccatccctcttgccatttttcaggcagag
accagcgtgaagaaacactaccttcgaaagtggctgaaaaactcctcgctgcaagacctg
gatatcagagcgatcttggattgggattattacattgagagattgggcagtgccattcag
aagattatcaccatcccagcagcactgcagcaggtgaagaatcctgtgcccagagtgcga
catcctgactggctgcacaaaaagttactggaaaaaaatgatgtgtataagcaaaagaaa
atcaatgagctgtttgttagcgaggggaagagacagatctctgccaaccagctcagtgca
aacctgcagccttcacaacttgctgacatggaggattttggagttgcaaagcgcttgcac
ccaactgttcctattagcagtaagcgaaagcgggtgccgttggcagaggagaaccagcag
gagacgcaggacatggagctgacccagtcctggagagagatccttggacccctgcctcct
attgggattacaaaggatgagcgtctggtgtggcttcggtatcacaagaagaagtgggag
ctacaggccaagcagcgcagagaacgtcggaagaggcgtcgacttctagatggagaggcg
ctgcctagcgggggaggggtgatccgtgatggaccctctgcaggacttggtggcttcctg
cgcaagacagcacgtagcatcctagacatgccatggcagatagtacagattggagagacc
agccaactggggttgttccggctctgggctgttatcggcagtgacctacactgcatgaag
ctgagtattccacgagtgttttatgtaaatcagcgcatcatcaagcctgaagagggtgca
gtatatagaaaggtgaaccgaatcctccctcgatcaaaccctatttataacctctatgaa
tattctgtccctgaggatgtgtaccggcagcacattaatgaaatccatgctgagctgtcg
gcacccgacatcgaaggggtgtatgaaactcaggtacctttaatgctgcgttccttggtc
cagctgggttgtgtgtgcatggttaataagcagctggttcgtcacctgatgggtcgggaa
gcagagacttttgatctggagcaccttgagatgaaatcactggcccagttcagttatttg
gaaccagggagcatccggcacatttacttctatcacaattcgcagggaaacaaggctctc
tttggcctcttcatcccttctcaacgcaaagctgcagtgtttgtgatggacacagttcgc
agtaaccagatgccaaatttgaacagcatgtactctgcagagcacagtgccctgatggag
aaggtaggccaggacctgctccctccagagaagcacaactttgaggtacgcgctgaaact
gacccaaagaccgtctttcgagctatccagaggctgctactcggctacaaggatgaacgt
cgagggcctacattaattgctgtccagtctaattgggagctgaagcgactgaccaatggg
atgcctgtgtttgaagagtttccactggttcctgttcgtgtgactgatgacatcggctat
aatattctagattggcagcggcacggtgcccggcggatgatccgacactatctgaacttg
gacagctgcttgtcccaggcttttgaaatggccaggtattatcacattcctgttgggaat
cttccagatgatatctccatgtttggttctgacctcttcttctcacgtcacctctgtcga
cacaatcacttgctgtggcagtcaccaacgtcacgaccagatcttggtggcaaagaggca
gatgataaccgcctagtgatggagtttgacgataaagcttcagttgaaatcaacaactcg
ggatgctattccacagtgtgtgtggagctggatattcagagcctggcagtgaataccatt
ctacagtcccatcacatcaatgacatggagggcgcatccagtatggggatcagttttgat
gtgatccagcaggcctccctggaggagatgatgactggcaatcaggcagccagcgcattg
gccagttacgatgaaactgcactttgttccaacacgttcaggattctgaagagcatggtg
gtgggatgggtaaaagagatcacccagtatcacaatgtttatgcggataaccaggtgatg
catttctaccgctggctgggatctccatcctctctgctatatgacccagcactccatcgg
acactgcacggtatgatgaagaagctattcctccaactggtggccgagtttaaacgcctg
ggctcttctgtgatttatgcaaatttcaaccgcatcattctttgtacaaagaaacggcga
atcgaggatgccattgcatatgtagattacatcactaaaagcatacattctcgtgagatt
ttccactccctcaccatctcgctttcccgctgctgggagttcttgctatggatggatcca
gctaattatggcggcatcaaaggaaagattccatccagtgtccagtatggagagaaggag
aaggagggaaatcgagaggataatgaggggaatgaggaagaggatgaagaggagattcat
tcagaagatgaagacaccaaagacgatgtggaggattcactagaaaataactggaacatt
gtccagtatctgccccaggcagcctcctgtcagagctatttcctaatgattgtatcagct
tacattgtagctgtgtatcacagtatgagagaggaaatgaagcgcaatgcccctggatgt
actcccatcaagagaaaacagaccagtcagatatcccaggaggctgaggcagatgctggt
gctatgccaggtatgatcaccttctctcaggattatgttgccaatgaactcacgcagagc
tttttcaccatcgcccaaaagatccagaagaaagttacaggcacccgtcatgtcaccgag
ccctctgagatgttcccagtattacctggctcatacctgccactcaataaccctgcacta
gaattcattaaatacgtttgtaaggtgttgtctttagacacaaacattaccaatcaagtg
aataagctgaaacgagatctcttgcgcttaattgatactggtgaattctcagaggatgcc
cagtttaaggatccttgtcggtcatacatcctgtcagaagttatctgcaggaattgtaac
ttctgtcgggacctggacctttgcaaagacccttccaccctgcaggatgggtctgcacta
cccaagtggatttgcacaaactgtcaggcagcgtatgattccgaatcaattgagatggct
ttggtggaggtgctacagaagaaactaatggccttcacgctgcaggacctggtctgcctg
aagtgtaaaggggtgaaagaagctaatatgcccatatactgcagctgtgctggagatttt
gatcttaccatctccacaaaagtatttgtagagcagatttctgtctttagaaatattgcc
cggcattataatatgccgtacctcctggagatgatagagtggctgctgcagatgaatcct
cacattaccctgacgaggaagtga
DBGET
integrated database retrieval system
