Geotrypetes seraphini (Gaboon caecilian): 117365586
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Entry
117365586 CDS
T09159
Symbol
COMP
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04145
Phagosome
gsh04510
Focal adhesion
gsh04512
ECM-receptor interaction
gsh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117365586 (COMP)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117365586 (COMP)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117365586 (COMP)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117365586 (COMP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117365586 (COMP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsh04147
]
117365586 (COMP)
00536 Glycosaminoglycan binding proteins [BR:
gsh00536
]
117365586 (COMP)
Membrane trafficking [BR:
gsh04131
]
Endocytosis
Phagocytosis
Opsonins
117365586 (COMP)
Exosome [BR:
gsh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117365586 (COMP)
Exosomal proteins of colorectal cancer cells
117365586 (COMP)
Exosomal proteins of bladder cancer cells
117365586 (COMP)
Glycosaminoglycan binding proteins [BR:
gsh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117365586 (COMP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF
EGF_MSP1_1
CtIP_N
KxDL
Motif
Other DBs
NCBI-GeneID:
117365586
NCBI-ProteinID:
XP_033812010
UniProt:
A0A6P8S1J1
LinkDB
All DBs
Position
8:complement(103391451..103489034)
Genome browser
AA seq
763 aa
AA seq
DB search
MPSALLCIQLLGLHCLLVAGQAVERGGDVQTQMLREMRETNQVLKEVRELLKHQIKELTF
LNKAVTECDACGIRKEATSPEVSVAVLRNQCTPNPCFPGVPCTETPEGFKCGTCPPGFTG
DGTHCTDIDECSLNPCFPQVRCINTAPGFRCGPCPRGYTGPPLEGVGLTFAKKNKQMCTD
INECENNGNTCTANSICTNTRGSYRCGACKPGYVGDQTSGCRRELTCSNGKTNPCHENAE
CVTERDGTTSCVCAIGWAGDGFFCGKDTDIDGFPDERLRCSDRRCKKDNCVTVPNSGQED
ADQDGIGDACDDDADGDGIPNAQDNCILVHNVAQKNSDQDNLGDACDNCRVDKNDDQLDT
DGDGKGDACDDDMDGDSIKNLADNCRKIPNPDQKDTDGDGVGDVCDSCPSISNPDQLDAD
HDLVGDPCDTNQDSDGDGHQDTRDNCPMVINSGQLDTDRDGLGDECDDDDDNDGIPDYAP
PGPDNCRLVRNPGQEDTDGDGIGNACQGDFDKDLVIDRIDVCPENAEITLTDFRAYQTVV
LDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTMTDDDYAG
FIFGYQDSSSFYVVMWKQTEQTYWQANPFRAVAEPGIQLKAVKSTSGPGEQLRNSLWHTG
DTPSQVKLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFFDGPQVVADSSVILDTTMR
GGRLGVFCFSQENIIWANLKYRCNDTIPEDYETFREQQLHLKA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagctctgctatgcattcagcttttgggtctgcactgccttttagtagcaggt
caggcagttgaaagagggggagatgttcagactcagatgcttagagagatgagggaaacc
aatcaggttttgaaagaagtccgagagctgttgaagcatcagatcaaggagctcacattt
ctgaataaagcggtcacggagtgtgatgcttgtggcataaggaaggaagcaacaagtcca
gaagtcagtgtggcagtgcttcgtaaccagtgcaccccaaatccttgttttcctggagtg
ccctgcactgagactcctgagggctttaagtgtggcacctgtcctccaggtttcactggg
gatggcacgcattgcactgacatcgacgagtgcagcttgaatccgtgtttccctcaagtc
cgctgcatcaacacagcccctggattccgttgtggcccttgccccagaggatacactggg
cctccactggaaggtgtgggattaacctttgcaaaaaaaaacaaacagatgtgtacagat
attaatgagtgtgaaaacaatggtaacacctgtactgcaaactccatctgcaccaacaca
cggggatcatacagatgtggtgcctgcaagccaggatatgttggagaccagacatctggc
tgcagaagagagctgacctgttctaacggcaagacaaatccatgccatgaaaacgcagag
tgtgtcactgaacgagacggaacaacttcatgtgtttgtgcaattggctgggctggagat
ggattcttctgtgggaaagacacagacattgatgggttccctgatgaaagactgcggtgt
tcagacagaagatgtaaaaaggataactgtgtgacagtgccaaattcaggccaggaggat
gctgaccaggatgggataggagatgcctgcgatgatgatgctgatggagatggaatacca
aatgctcaagataattgtatcttggtgcataatgtggctcagaagaattctgatcaggat
aatttgggagatgcctgcgacaactgtcgtgttgataaaaatgatgaccaactggacacc
gacggggatggaaagggcgatgcatgcgatgatgacatggatggagactcaattaagaat
ttagcggacaactgcagaaagattcctaacccagaccaaaaagatactgatggggatgga
gtgggagatgtatgtgatagctgcccatccatcagcaaccctgaccagctagatgcagac
catgatctggtaggggatccatgtgacaccaatcaggacagtgatggggatggccatcag
gatacacgggacaactgcccaatggtgatcaacagcggccagctggacactgaccgagat
gggcttggagatgaatgtgatgatgatgatgacaacgatgggattccagactacgcacct
cctggtccagataactgcaggcttgtgcgaaatccagggcaggaagatacagacggtgat
ggcatcggaaacgcatgtcagggtgactttgacaaggatttggtgattgatagaatcgat
gtttgtccagagaatgctgagatcacgctgactgacttcagagcatatcagactgttgtc
ctggatcctgagggagatgcccaaattgatcccaactggattgttcttaatcagggcatg
gaaattgtgcagaccatgaatagtgatccaggtctggctgttggctacacagccttcaat
ggagtggattttgaagggacattccatgtgaacactatgactgacgatgactatgctggc
ttcatatttggctaccaggacagctccagcttctatgtcgtgatgtggaagcagactgaa
cagacatactggcaggctaatcccttccgtgctgtggctgaacctggaattcagttaaag
gcagtgaagtccacaagtggccctggggaacagctgcggaattctttgtggcacacagga
gacactcccagccaggtgaaattgctgtggaaggaccccaggaatgtaggctggaaagac
aagacttcctatcgttggtttctgcagcacaggcctcaagtgggatacatcagagtcagg
ttctttgatggccctcaagtggtggcagattccagcgtcatcttagacactacaatgaga
ggtggccgacttggagttttctgtttctctcaggagaacattatttgggcaaacttgaaa
tatcgttgcaatgatactattcctgaagattatgagacattcagagaacagcaactccat
cttaaagcctaa
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