Geotrypetes seraphini (Gaboon caecilian): 117365629
Help
Entry
117365629 CDS
T09159
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04120
Ubiquitin mediated proteolysis
gsh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117365629 (SYVN1)
04120 Ubiquitin mediated proteolysis
117365629 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117365629 (SYVN1)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117365629 (SYVN1)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117365629 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
Endonuclease_7
zf-C3H2C3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117365629
NCBI-ProteinID:
XP_033812099
UniProt:
A0A6P8S2P8
LinkDB
All DBs
Position
8:68124580..68273922
Genome browser
AA seq
624 aa
AA seq
DB search
MQGAEVRLAKMFRTAALMVGSLALTAAVVVHAYYLKHQFYPTVVYLTKSSPSMAVLYIQA
FVLVFMLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLL
LFLKCFHWLAEDRVDFMERSPNISLLFHFRITSLMLLLEILDFLFVSHAYHSILTRGASV
QLVFGFEYAILMTMVLTVFIKYILHSVDLLRENPWDNKAVYMLYTELFTGFIKVLLYMAF
MTIMIKVHTFPLFAIRPMYLTMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNV
CIICREEMITGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTPSQPPQEQRQ
QDQAQQQPPHTPLLPQPPNFPQGLLPPFPPGMFPFWPPMGPFPPVPGVPAPGTSENPSRA
DNTPSTSGTQATSASSSRASDAAAGTSSIPGFPFPPPWLAMSFPPPFGFPPMPVPPAGFA
GLTDEELQAIEGHERQNLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGPPRSASPLQP
SPVPSPSESTSDAVTTSSATGAVPPPLATDLSTSGQTAETETVGAEDVPIPAADEEDAFH
EEPDAVELRRRRLQKLETPTAESH
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtgctgaggtcaggctagccaagatgtttcggacagcggcattgatggtcggc
agcttggcactgactgctgccgtggtagtacatgcctattacctgaagcaccagttctat
ccaactgtagtgtacctgaccaagtccagtcctagcatggcagttctgtacatccaggcc
tttgttctggtttttatgctgggtaaattcatgggcaaggtgttctttgggcagctacga
gcagcagaaatggagcatctgttagagcgttcctggtatgcagtaacagagacctgcttg
gcgttcacagtcttcagagatgacttcagccctcgctttgtagctcttttcactctcctc
ctcttcctcaagtgttttcactggttggctgaggaccgggttgactttatggaaagaagt
cccaacatttctcttctttttcactttcgtattacatcgctgatgctgctattggagatc
ctggattttctctttgttagtcatgcgtaccacagcattcttacacggggagcatctgtg
cagctggtctttggctttgagtatgctatcctcatgactatggtccttactgtcttcatc
aaatatatcctgcactctgtggacctgttacgggagaatccctgggacaacaaggcagtg
tacatgttatacactgagctcttcacaggctttattaaagtactgctctacatggcattt
atgaccatcatgattaaagtgcacacctttccattgtttgccattcgacccatgtacctg
accatgaggcaatttaaaaaagcagtcacagatgccattatgtcacgacgggccattcgc
aacatgaacacactgtatcctgatgctactccagaggaactgcaagccatggacaatgtt
tgtatcatctgtcgagaagagatgattactggagccaagcgcctgccgtgcaatcacatc
tttcacaccagctgtctgcgatcttggttccagcgccaacaaacttgtcccacctgcagg
atggatgtcctgcgtgcctccctgcccaccccatctcaaccacctcaggagcagcggcag
caggatcaggcacagcagcagccaccccatacccctctgcttccccaaccacctaatttc
ccacaagggctccttcctccattccctcctgggatgtttcctttctggcctcccatgggt
ccttttcctcctgtccctggtgtcccagcacctggtacttctgagaatccatctagagct
gataacactccatctacatcaggcacccaagccacttctgccagctcttcaagagccagt
gatgctgcagctggaacatcttccattcctggatttcctttcccacctccatggctggcg
atgtcctttccccctccatttggctttcctcccatgccagtgccacctgctggttttgca
gggctgacagacgaggagctgcaggccatagaaggccatgagcggcagaatctggaggct
cggctacagtgcctgcagaacattcacacactactagatgctgccatgctgcaaatcaac
cagtacctgacagtgctggccaccatcggacccccccgtagtgcctctcctctgcaaccc
tcccctgtgccaagtccttcagagtccacgtcagatgctgtgaccacctcaagtgcaact
ggagctgtgcctccaccactagcaactgatttatccacatcaggacaaacagcagagact
gaaacagttggtgcagaagatgtacctattccagcagcagatgaggaggatgcttttcac
gaagaacctgatgctgtagagctgcgcaggcgcagacttcaaaaactggaaacacctact
gccgagagccattga
DBGET
integrated database retrieval system
