Geotrypetes seraphini (Gaboon caecilian): 117365667
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Entry
117365667 CDS
T09159
Symbol
LEF1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04310
Wnt signaling pathway
gsh04520
Adherens junction
gsh04916
Melanogenesis
gsh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117365667 (LEF1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117365667 (LEF1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
117365667 (LEF1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117365667 (LEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117365667 (LEF1)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
117365667 (LEF1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117365667
NCBI-ProteinID:
XP_033812200
UniProt:
A0A6P8S232
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All DBs
Position
1:313860992..314115524
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AA seq
380 aa
AA seq
DB search
MPQLPGAGDPELCATDELIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNESEIIP
SNTGHEVSRRTQVPQESYHDKGREHTEVGKHLDGGLYCKGPSYSGYSGYIMMPNMSNDPY
MSNGSLSPPIPRTSNRVPVVQPSHAIHPLTPLITYSDEHFAPGSHPSHIPSDMCTKQGMS
RHPSAPDMPTFYPLSPGGVGQITPPLGWFSHHMVPGPSGPHATGIPHPAIVTPQIKQEHP
HSDSDLIHMKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQIL
GRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQEATSGEKQN
SFSTCKAKTAAGVLLEMEAC
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctccccggggcaggggaccccgagctgtgtgccaccgatgagctcattccc
ttcaaggatgaaggggatccccagaaggagaagatcttcgccgagatcagccatcccgaa
gaggaaggcgacctggccgacatcaagtcttctttggtcaacgagtccgagatcatccct
agcaacactgggcacgaggtgtcaaggcgaacacaagtgcctcaagaatcctatcatgac
aaaggcagagagcacaccgaagttggaaagcatctggatggtggtttatactgcaagggc
ccttcgtactctgggtattctggatatatcatgatgccaaatatgagtaacgacccatac
atgtccaatggatccctgtcgccacccattccaagaacatcaaacagagtgccagtggtg
cagccgtcacacgcaattcacccccttacgccactcatcacgtatagtgatgaacacttt
gcaccagggtcgcacccctctcatatcccatccgatatgtgcacaaagcaaggtatgtcc
agacatccctctgcaccagacatgccaactttttaccctctttctccgggtggggtggga
cagatcacccctcctcttggctggttttcgcatcacatggttcctggtccatcaggacct
cacgcaactggaatccctcaccccgctattgttacgcctcagataaaacaggagcatccg
catagtgacagtgacctaatacatatgaagcctcaacatgaacagcggaaagaacaagag
ccaaaaagacctcacattaagaagcctctgaatgctttcatgttatacatgaaggaaatg
agagcgaatgtggtagctgagtgtactctaaaggaaagtgcggccatcaatcagatactg
gggagaaggtggcatgctttgtcccgtgaagaacaggcaaaatattatgaactggcccgc
aaggagcggcagttacacatgcagctctacccaggctggtctgcaagagacaactatggt
aagaaaaagaagaggaagagagaaaagctgcaggaagctacatcaggagaaaaacaaaat
tcattctcaacatgcaaagcaaagacagcagcaggagtcctcctggagatggaagcgtgc
tga
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