Geotrypetes seraphini (Gaboon caecilian): 117365679
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Entry
117365679 CDS
T09159
Symbol
SIN3B
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K23213
paired amphipathic helix protein Sin3b
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117365679 (SIN3B)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
117365679 (SIN3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
117365679
NCBI-ProteinID:
XP_033812218
UniProt:
A0A6P8S4X5
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Position
8:96686154..96777517
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AA seq
1139 aa
AA seq
DB search
MASSGGGGPGGSCKFGTNSWNKAQEKLPVHVEDALSYLDQVKIRFGSDPATYNGFLEIMK
EFKSQSIDTPGVIRRVSQLFHEHPDLILGFNAFLPVGYKIELPKNGRVIVQTAVPNQVSS
NSSPSATTGSGSTLQYSQENSHQSPEDLRQQLTHKEEKPQASPESDSIEFNNAISYVNKI
KTRFLDRPEIYRSFLEVLHTYQKEQLNPKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFG
QFLPEAKRSLFTGNGPCEISAVQKTEIEKRMEHNKKQSRSLLLRPVTCPAKKKMKLRGMK
DQSVAGVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELVQLVTPFL
GKFPELFAQFKSFLGVKELSFASPLTSDRSGDGIGREIDYASCKRIGSSYRALPKTYQQP
KCSGRTAVCKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLA
TIRVLESVQKKLSRMSAEDQEKFRLDDCLGGTSEVIQRRAIYRIYGDKAQDIIESLKKNP
VTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKS
LLNEIESVYDEHQEQHTEGRNTTVSEPHLIFVYEDKQILDDAASLISYYVKRQPAIQKED
KDTIKQIIHHFIPDLFFFHQPRLRKVSEESSDDDQEPSMECEPEAAEHRKKTITSPQTSV
PENQVEPCVVAAAAASAAPTEHHGNMEDVYSLFFANNNWYFFLRLHQTLCARLLKIYRQA
QKQLLEYRNEKDRENLLCEGRKEKANDPAMELRLKQPSEVELEEYYPAFLDMVRNLLIGN
IDATQYEDTLREMFTIHAYIGFTMDKLIQNIVRQLHHLVSDDVCLKVVELYLSEKKQGAA
GGNLSSQCVRAAKETSYQWKAEHYMTDENCFKVMFLQRKGQIIMTIELLDTEEVQTEDPV
EVQHLANYMEQYVGVEGSQSSHNDGFLLKPVFLQRNIQKFRRWQCKQVKAMKNEVKSSWK
RLIGVESTCNMDCRFKLNTHKMMFIMNSEDYMYRCGALPRAKQVQPVVLLKHHQQFEAWH
NRWLEGNVTNEEAEVVQDWLLGEEDEDMVPCKTICETVNVHGMTVNKYKVQYNRRPASP
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtagtggcggaggtggtcctggtggcagctgtaaattcggtacaaacagctgg
aacaaggcacaggaaaagctgccagtacatgttgaagatgctctatcatatctggaccag
gtcaagattcgttttggaagtgaccctgcaacttacaatggatttctggaaatcatgaaa
gaatttaaatcacaaagcatcgatacccctggagtcatccgacgtgtctcgcagctcttt
catgaacatccagacctcattctaggattcaatgctttccttcctgtgggctacaaaatt
gaacttccaaagaatggcagggtaattgtgcaaacagcagtacctaatcaggtgtcttcg
aactctagtccaagtgccacgacgggaagcggatcgacactgcagtactctcaggagaat
tcccaccagagcccagaggacctcagacagcagctgactcacaaagaggagaaaccgcaa
gcatcgcccgagtccgattccatcgagttcaacaatgcaataagttatgtgaacaaaatt
aaaacacgcttcctggataggccagagatctacagatcctttctggaagtcttgcacaca
tatcagaaagaacaattgaatccaaagggccgaccattccggggcatgtcagaagaagaa
gttttcactgaagtagcaaatctctttcgaggccaagaggatctactctctgaatttggg
cagttccttcctgaagccaaaagatctctgtttacaggcaatgggccctgtgaaattagt
gctgtacagaaaactgaaattgagaagagaatggaacacaataaaaagcaatccagatcc
ttgctgctacggccagtaacttgcccggcaaagaaaaaaatgaaacttcgaggcatgaag
gaccagtcagtagctggagtcgggaaatacgggaccctgcaggagttttcattctttgac
aaggtacgcagggtactaaagagtcaggaagtatatgagaattttctccgctgtattgct
ctcttcaatcaagagcttgtatctgggtcagagcttgtgcaactggttacaccattttta
gggaagtttccagagctgtttgcacagttcaaatcattcctgggagtgaaggaattatct
tttgcgtcaccactgacaagcgataggtcgggtgatgggattggccgagaaatcgattat
gcatcttgcaaacggatcgggtcaagttatcgagcacttccaaaaacataccaacaaccc
aaatgcagtgggaggacagctgtttgtaaagaggtgctgaatgatacttgggtctcattc
ccatcctggtccgaagactcgacctttgtcagctcaaagaagaccccatatgaagaacag
cttcatcgttgtgaagatgagcgctttgagctggatgttgtcttagagaccaacctggcc
actatccgtgtgctggagagtgtccagaagaaactgtctcgtatgtccgcagaagatcag
gagaagtttcgattggatgactgtctgggtggaacctcagaagtgatccagcgcagagcc
atttatcgcatttatggagacaaagcacaggacatcattgaaagcctcaagaagaacccc
gtgacagctgttcctgttgtgttgaagaggttgaaagccaaggaggaggaatggagagaa
gctcagcaaggttttaacaagatttggcgagagcagtatgaaaaagcatacttaaagtca
ctggaccaccaggctgtaaattttaagcagaatgacaccaaagccctgcgctcaaagagt
ttgttgaatgaaatagagagcgtgtatgatgagcatcaagagcaacacacagaaggccgc
aatactacagtaagcgagcctcaccttatctttgtctatgaagataaacagatcctggat
gatgcggcctccctcatcagctactatgtgaagcggcagccagccatccagaaggaagac
aaggacaccatcaagcaaatcattcatcacttcatcccagatctctttttcttccatcag
ccacgcctacgaaaggtctctgaagagtcatctgatgatgaccaggagcccagcatggag
tgtgagccagaggcagccgagcacaggaaaaaaactataacatctcctcagactagtgta
ccagagaatcaggttgagccctgtgtggtggcagcagcagcagcttctgcggcaccgact
gagcatcatgggaacatggaggatgtctatagtctcttcttcgctaacaacaactggtat
ttctttctccgcctccaccagactttgtgtgccaggctgttaaagatttatcgtcaggct
caaaagcagcttttagagtatcgaaatgagaaagatagggagaatctgctctgcgaggga
aggaaagaaaaggcaaatgatcctgcgatggagctcaggctgaagcaaccaagtgaagtg
gaattagaagaatactacccagcatttttagatatggtaagaaacctgctcattggaaat
attgatgcaacccagtatgaggacaccctgagggaaatgttcacaatccacgcatatatt
ggcttcaccatggacaaacttatccagaatattgtacgacagctgcatcatctggtgagt
gacgatgtctgcttgaaggtggtggagctgtatctgagtgagaagaagcagggagctgct
ggggggaacctttcttcacaatgtgtgcgagcggccaaggagactagctaccagtggaaa
gctgaacactacatgactgatgaaaactgtttcaaggtaatgttcttgcagaggaaaggg
cagataataatgaccatagagttactggatacggaagaagttcaaacagaagaccctgta
gaagttcagcacttggccaattacatggaacagtatgttggagtggaagggtcacagagc
agtcacaatgatggattcttactgaagcctgtgtttttgcaacgaaacattcagaaattc
cgcagatggcagtgtaaacaagtgaaggcaatgaagaatgaagtaaagagttcatggaaa
aggctgattggtgtggagagcacctgtaacatggactgccggttcaaacttaacacacac
aaaatgatgttcatcatgaactcggaggattacatgtacagatgtggggcgctccctcgg
gccaagcaggtacagcccgttgtcttattgaaacaccaccaacagtttgaagcttggcac
aaccgctggttggaaggaaacgtaaccaacgaggaggcagaagtggtccaggactggctg
cttggtgaagaggatgaggacatggtgccatgcaaaaccatctgtgaaactgtgaatgtg
catgggatgactgtgaacaagtacaaagtgcagtataatcggcgtccagcttctccctag
DBGET
integrated database retrieval system
