Geotrypetes seraphini (Gaboon caecilian): 117365753
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Entry
117365753 CDS
T09159
Symbol
SDC3
Name
(RefSeq) syndecan-3 isoform X1
KO
K16337
syndecan 3
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04514
Cell adhesion molecule (CAM) interaction
gsh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117365753 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117365753 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gsh00535
]
117365753 (SDC3)
Proteoglycans [BR:
gsh00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
117365753 (SDC3)
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Ortholog
Paralog
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Motif
Pfam:
Syndecan
SDH8
Motif
Other DBs
NCBI-GeneID:
117365753
NCBI-ProteinID:
XP_033812422
UniProt:
A0A6P8S3Y9
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Position
8:complement(11186180..11456435)
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AA seq
418 aa
AA seq
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MELLPGSLLLLLVATHAALIEAQRSARRWGQRPSLAGTDDWGKSYQALRWASQYEDESPV
DLESSGGDDVLEDDDTDDVYSGFGSGSGYFEQESGIDMAVRLTTDVSVTLTTTPVVLPVT
SIQPVATPFEIFPSEEATTEPTTSFLHMDRVTEAPMITNRKVTTSAASSAAAAVEAVTMK
TAKPTNVRKLLPHVFTFTSRKTPTLEGTTVTLMETAAITEAATTRHISSSTGQPKSLPRP
ATSRTLDVIPFLEKSTVQATTATSAPTEILQTESWDVILATAIDNDVEIPVSGGPSGDFE
IREEEDTTRPELNNEVVAVVTPAEGPGLGRNAETGLIDNTIDSGNSAAQLPQKNILERKE
VLIAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQASVTYQKPDKQEEFYA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgttgccgggctccctgttgctgctgctggtggccactcacgctgccctgatt
gaagctcagcggagtgccaggagatggggacagaggcccagtcttgctgggacggacgac
tggggaaagagttaccaggcgctgcgctgggccagtcagtatgaagatgaaagtccggtg
gacctagaaagctcgggtggcgatgacgttcttgaagacgatgacactgatgatgtgtac
tcaggctttggatctgggtctggatatttcgaacaagaatctgggatcgacatggcagtg
aggcttacaacagatgtttcggtgacactaacgaccacaccagttgtgcttcctgtcaca
tctatccagcccgtggcaactccctttgaaatattcccatcagaggaggccaccacagag
cccaccaccagcttcctgcacatggacagagtaacggaggcaccgatgattacaaacagg
aaggtgaccaccagtgcggctagcagcgccgccgctgctgttgaagccgtcaccatgaag
acagccaagccaacaaatgtcaggaaattattgccccatgtcttcactttcacatcaagg
aagacgcctactctggaagggactacggtgaccttgatggaaactgctgccatcacagaa
gctgccacaaccaggcacatctccagcagcactggccaacccaaaagcctaccaagacct
gcaacatccaggaccttggacgtcatccccttcttagaaaagagcacagtgcaagctacc
actgcaacctccgcacccacagaaatactacagacggagagctgggatgtgatcctggcc
acagctattgacaatgacgtggaaatccccgtcagtggcgggccaagcggtgactttgag
atccgagaggaggaggatacgactaggccggagctgaataatgaggtggttgctgtggtt
accccagcagagggcccagggctcgggaggaacgcagagactggcctcatagacaatacc
atcgattccggaaactcggccgcgcagctgcctcagaagaacattctggagagaaaagaa
gtcttaatagctgtgattgtcggaggcgtggtgggcgccctgttcgctgcctttctggtc
atgctgttgatctaccggatgaagaagaaagacgagggaagctacacgctggaggagccg
aagcaagccagcgtcacgtaccaaaaacccgacaaacaggaggagttctatgcatag
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