Geotrypetes seraphini (Gaboon caecilian): 117365769
Help
Entry
117365769 CDS
T09159
Symbol
LRFN1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gsh04515
]
117365769 (LRFN1)
04990 Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
117365769 (LRFN1)
Cell adhesion molecules [BR:
gsh04515
]
Immunoglobulin superfamily
SALM family
117365769 (LRFN1)
Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117365769 (LRFN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
Ig_2
ig
fn3
LRR_9
Ig_DSCAM-DSCAML_C
Sp38
C2-set_3
Baculo_11_kDa
Motif
Other DBs
NCBI-GeneID:
117365769
NCBI-ProteinID:
XP_033812459
UniProt:
A0A6P8S3J1
LinkDB
All DBs
Position
8:complement(18110911..18156795)
Genome browser
AA seq
759 aa
AA seq
DB search
MEKLALYLLMLGTLVKAQHCPGRCICQNISPTLTMLCAKTGLLFVPMAIDRRTVELRLTD
NFITVIRRKDFVNMTNLVHLTLSRNTISQIMPLAFADLRALRALHMNSNRLASLRNEHFK
GLANLRHLILSNNQIGFIEQSSFDEFLSTVEDLDLSYNNLEGLPWEAIGQMINLNTLTLD
HNLIDHIAEGTFSLLHKLVRLDMTSNRLHKLPPDNLFLRAQVLANARGSHPSSLAISFGG
NPLHCNCELLWLRRLTREDDLETCASPEQLMDKYFWSIQEEEFICDPPLITRHYSTKLFI
MEGQAVSLKCKAVGDPDPSIHWIAPDGKLIHSTTRAIVYDNGTLDISITTLKDNGVFTCI
ASNAAGEATAPVEVNIVPLPLLVNNTNHMKGPDPGSSDITTSTKSGSNDTKNHLDKKIVA
ADLTSTSVVIHWPSERHIPGIRMYQIQYNSSLDDSLVYRMIPSTNKTFRVNDLAAGREYD
LCVLAVYDDGITSLTATRVVGCVQFTTESENTHCQSIHTQFLGGTMIIIIGGIIVASVLV
FIIILMIRYKVYSNQEEQQKAKVSNVYSQTNGNQSGSQSQPTSKLGEDKYENLQQSTTIA
AKEAPNEALSSEPKKADPSRGTQNTSEIMLTEMNKRKTRTTNDLQTIALLSSEEGQSEGS
AAGSTMSLCLIDSNREVVSNRGKLSKLSNTDLLPREISRTHHHRFSFDGDYSLFQSHSYP
RRARTKRHMSTSQLNSEESSLSNRRVTFSSTEWMLESTV
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctggccttgtacctgctgatgcttggcacactggtgaaggcccaacactgt
cctggtcgttgtatttgccagaacatctctcctacactaactatgctctgtgccaaaaca
ggacttctatttgtgccaatggcaattgacagacggactgtggagctccgactcacagac
aatttcatcactgtcatcaggcgaaaagactttgtcaacatgaccaacctcgttcacctc
acattatccagaaacactattagccagatcatgcccctagcctttgccgacctgcgtgcc
ttacgtgccctgcacatgaacagcaaccggttggcatccctccgcaatgagcattttaaa
ggactggcaaatcttcgacacttaatattgagcaacaaccaaatcggtttcattgaacag
tcttcctttgatgaattcctgtccaccgtggaggatcttgacctttcttacaacaactta
gaaggtctcccctgggaggccattggacagatgatcaacctaaacactctcactttggac
cacaacctcattgaccacattgcagaaggtaccttttctttgctccacaaattggttcgt
ctggacatgacatccaaccgtctacacaaactccccccagacaatctttttctaagggct
caagtgctggcaaatgcccggggttctcacccatcctcattggccatcagttttggagga
aaccctctgcattgtaactgtgaactcctctggcttcggcgcttgacccgggaagatgat
ttggagacctgcgcttcaccagaacagcttatggataaatatttttggtccatccaggaa
gaagagttcatttgtgacccaccactgatcacacggcattattcaactaaacttttcatc
atggagggtcaagcagtaagtcttaagtgtaaagctgtgggagaccctgatccctccatc
cactggatagctccagatgggaaactgattcatagcactaccagggccattgtttatgac
aatggcactttggacatttcgatcaccacacttaaggacaacggggtcttcacttgcatt
gcctcaaatgcagcaggagaagccacagcccctgtggaggtcaacattgttcctctcccg
cttttggtgaacaacacaaaccatatgaaggggccagatccaggttcatctgatattacc
acctctaccaagtctggttccaatgacacaaagaaccatttggataagaaaattgtggct
gcagacttgaccagcacatctgtcgttattcactggccttctgagcgacacatccctggg
attcgaatgtatcagatacagtacaacagctctctggatgactctctggtttacaggatg
atcccttcaaccaataagaccttccgtgtgaatgacttggcagcaggccgtgagtatgac
ctatgtgtcctggctgtctatgatgacggaatcacctccttgactgctactagggttgtg
ggatgcgtgcagttcaccactgaaagtgagaatactcactgccagtccatccacacgcag
ttcctcggaggcaccatgatcatcatcatcggtggcatcatcgtggcctcggtcttggtt
tttatcatcatcttaatgatcaggtacaaggtctacagcaaccaagaagagcaacagaag
gcaaaagttagcaatgtttattcccagaccaacggcaaccagtcggggtcccagtctcag
cctacctccaagcttggagaagacaagtatgagaaccttcaacaatctaccactattgca
gccaaagaggcccctaatgaggctctaagttctgagcccaagaaagctgatccctctcga
ggaactcaaaatacatcggagattatgttgactgagatgaacaagaggaaaactagaacc
actaatgacttgcagacaattgctttgttgtcctctgaggaaggccaaagtgagggcagt
gcagctggttccaccatgtctttatgcttgatagactccaaccgtgaggttgtgtccaat
cggggaaagctaagcaaactaagcaatacagaccttctacccagagagatatcaagaact
caccaccacaggttctcctttgatggggactattctttgtttcagagccacagttacccc
aggagggcacggacaaagaggcacatgtccacttcccagctgaactcagaggagtcctcc
ctcagtaacaggagggtcacctttagcagcactgagtggatgttggaaagcacagtctga
DBGET
integrated database retrieval system
