Geotrypetes seraphini (Gaboon caecilian): 117365811
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Entry
117365811 CDS
T09159
Symbol
DEPDC5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117365811 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117365811 (DEPDC5)
Membrane trafficking [BR:
gsh04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
117365811 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
117365811
NCBI-ProteinID:
XP_033812559
UniProt:
A0A6P8S3S5
LinkDB
All DBs
Position
8:130360433..130484297
Genome browser
AA seq
1595 aa
AA seq
DB search
MRTSKISKLLMHKKGFGGTDDELVVNPKVFPHIKLGDIVEIAHPSDEYSPLLLQVKSLKE
DLQKETISVDQSVAQVFRLRPYHDVHVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYITQKVDFSGIRAQVGELWVKSEKVTCGYIGEHTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFSKWKEKNCSHEVTVVLFSRTFYDAKSIDEFPEVHRA
SIRQDHEGRFCEDFYKVVVQNERREEWASLLVTIKKLFIQYPVLVRLQGAEGFPKGYNAT
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCLGEQPLHAVPLFKLHSRSSPSGSHLGDDYNIPHWINHSFYTSKSRLFCKSFT
PRIKLAGKKFSTEKGKNEKETSLGTPKDPENALPIQVDYDAYDAQVFCLPGPSRAQRCTT
FRPLRERERECQTRKSSGSYEVSYSPSLQSRTLPLEEIRSQASDDSSLGKISNILLIPRP
HHQYEVSSSLGYTSTRDFLERMMESQQRDSSAPGRFHVGSAESMLHIRPGGYTLQRALIN
PFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNIAEMQGDGRRDPTHSSAELL
ELAYHEATGRHGASYVRNSRMEEFPSTVVGSQNTDMNQKAQQKDSGQETASTTLEHNLTL
SAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDHQSLQNDYTEGCYDLLPEADLDRRD
EEAAQMSAQQVFEEFICQRLMQGYQIIVQSKPQKASVAGPPPLSSSPLYSRGLMSRNRAE
EEDQFWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCPSHSDCEFVSCWVE
FSHERLEEYKWNYLDQYICSSGSEDFSLIESLKFWRTRFLLLPACISTTKRILEGEAHCD
IYGDSPRSDYEDGQLLDGFIRFMEGLNRIRRRHRSDRIIRKGAVLKNLQMSAPICTHPPE
PTGPSVGKKGTSALSALLEMDASQKNSGEQQAAMHAGKSCAQSTDSSGTAITPTYVDSPR
KDGAFFMEFVRSPRTAPIFNSQLSMDQAIPVTLDSASSGSGVNAVQSNERSSGQASGIGG
STNMVDAGSALVEGSTLQISGGASTLTSSSTLAEILEAMKHPTSGIQLLSEQKGLSPYCF
ISAEIVHWLVNNVDWVQTQLMAMDIMQKMLDEQLIVHASGEALRTFIYGFYFYKIMVDKE
QDRAGLQQSTWHTTAMDDFTAFQRKWFEVAFVAEETLHSELPAFLLPWLPSRPASYASRH
SSFSRSFGGRSQAAALLAATVPEQRTVTLDVNNRSNRLEWCSCYYHGNFSLNAAFEVKLH
WMALTAPVLCEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPLNISCLL
KEGSDNLFDGFDPETYWDRMHLFQEAIAYRFGFIQDKYSASAFNFPSENKPQYIHVTGTV
FLQLPYSRRKYSSGQQRRRRNSTSSTNQNMFADERIGYNWAYNTLLTKTWRSSATGDEKF
ADRLLKDITDFCANKDNRLLAFWTNCLDKMHASAP
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccagtaaaatctccaagctgctgatgcacaaaaaaggttttggggggactgat
gatgagttggtagtgaaccccaaagtgtttcctcacattaagctgggagacattgtggag
attgcacatcccagtgatgaatacagccctctgcttctgcaggtaaagtcgttgaaagaa
gatttacagaaagaaaccatcagtgtggaccagagtgtagcacaggtcttccggctccga
ccataccatgatgttcatgttaatgtggttgacccaaaggatgtgacccttgacctagta
gagctgacctttaaggaccagtacattgggcgtggggatatgtggcgattaaagaaaagt
ctggtcagcacatgtgcctacataacacagaaggtggatttttctggtatccgggcacag
gtgggagaactgtgggtgaagagtgaaaaggtgacctgtggttatattggtgagcatacc
cgggtggtattccgttcaacctctgctatggtgtatatcttcattcagatgagttgtgag
atgtgggattttgacatttatggtgacttgtactttgagaaagcagtaaatggtttcctg
gcagatcttttcagcaaatggaaggaaaagaactgtagccatgaagtgacagtcgttctc
ttttctagaacattctatgatgctaagagcatagatgagtttccagaggttcatcgagct
tcaattcgtcaagatcatgaaggaagattctgtgaagatttctacaaggtggtggtacaa
aatgagaggcgtgaggaatgggcttccttactggtgaccattaaaaagctcttcatccag
taccctgtactagtgcgattgcaaggggcagagggctttccaaagggatacaatgccact
tcagctcagggcaactatctggaagccattaacttgtccttcaatgtatttgacaagcac
tacataaaccgtaactttgacagaacagggcaaatgtctgtggtgatcacgcctggtgtg
ggggtgtttgaagtggatagattactcatgattttgactaagcaacgcatgatcgataat
ggtatcggtgtggacttggtgtgtctaggagagcagccactgcatgcagtgccactattt
aagcttcatagtcgcagcagccctagtggatcccacctgggagatgattataacatccct
cattggataaatcacagtttctacacctccaagagtcggctgttctgtaagagctttact
ccccgaatcaagcttgctgggaagaagttttcaactgagaaagggaagaatgaaaaagag
acatcactaggaactccaaaggaccctgagaatgctcttcctattcaagtggattatgat
gcttacgatgcacaggtattctgcttgcctggcccatccagagctcagcgctgcaccaca
ttcaggcctttgagggagcgggagcgtgagtgtcagactcggaagagttctggctcttat
gaagtgtcctatagtccctctctacaaagccgcacattacctctggaagaaataaggagt
caggcttccgatgacagctccctgggcaaaatctccaacatcctgctcatcccacgacca
catcaccagtatgaagtcagcagctcgctgggatacaccagtacaagagatttcctggag
agaatgatggaatcacagcagcgagattctagtgctcctggaaggtttcatgttggcagc
gcagaatcgatgttgcacatccgtcctggtggatacacgctgcagcgagcactcatcaat
ccctttgctccatcacgcatgcccatgaagctgacatcgaacaggaggcgatggatgcac
acttttccagtggggccatccggagaagcaattcaaatccatcatcagacacgtcagaac
atagctgaaatgcaaggagatgggcggcgagaccccacacactcctcagctgaactactt
gaacttgcataccacgaagccacaggcaggcatggtgcctcctatgtcagaaacagtagg
atggaagaattccccagcacggtagtcggcagtcagaatacagacatgaatcagaaagcc
cagcagaaggattctgggcaggaaactgcctctaccactctggagcacaatctgacattg
tctgctccccctgtagtgccaggcttctgttgtaccgtgggggtggactggaagtccctt
accacaccagcatgtctgcctctcaccacggattacttccctgatcatcagagccttcag
aacgattacacagagggctgctacgacctgctccctgaggctgatctggacaggagagat
gaggaagctgcacagatgagcgctcagcaggtgtttgaagagtttatttgtcaacgtctc
atgcaggggtaccaaattattgtccaaagcaagccccagaaggccagtgttgctggacca
cctcctctcagcagcagccccctctatagtcgaggcctcatgtctcggaaccgagctgag
gaggaggatcagttctggctgagtatgggccgtaccttccataaagtgactctcaaggac
aaaattatcacagtcactagatacctgccaaaatacccctatgaatctgcccagattaac
tatacctacagcctgtgtccctctcactcagattgcgagtttgtctcgtgctgggtggag
ttttcccatgagcgtctggaggagtacaaatggaattatctggaccagtatatctgttct
tctggatctgaagatttcagtctgattgaatccctaaaattctggaggactcgattcttg
cttctacctgcctgcatcagcaccacgaagcgcatcttggaaggagaggcacactgtgat
atttatggggacagcccacgatctgattatgaggatggccagctacttgatggattcatt
cgttttatggaaggcctaaatcgcatccgccgccgtcatcgatcagaccgcattattcgg
aaaggagctgtactgaagaatttacaaatgagtgctccaatatgcacacaccctccagag
ccaactggaccatctgttgggaagaagggcacttcagctctctcagctttgttggagatg
gacgctagtcaaaagaactcgggtgaacagcaagctgcaatgcacgctggaaagagctgt
gcacagtctacagacagcagtggcacagctattacacccacttatgtagatagcccacgt
aaggatggcgctttctttatggaatttgttcgtagcccacgtacagcccccatcttcaac
tcacagctttcgatggatcaggccattcctgtaacccttgacagtgccagctctggctca
ggggtgaatgcagtgcagtccaatgagcgcagcagtggccaagcgtctgggattggtggc
tctaccaacatggttgatgcaggatcagcattggtggagggcagcactttgcagatttca
ggaggcgccagcacactcacatcatcctcaaccctggcagagatcctggaagccatgaag
cacccgactagtgggattcagctgctctcagaacagaagggtctctccccatactgcttc
atcagtgcagagatagtgcactggctggtgaataatgtggactgggtgcagacgcagctt
atggcaatggatatcatgcagaagatgctggatgaacagctaattgtacatgcatcgggc
gaagctctgcgcaccttcatatatggcttctacttctacaagataatggtggacaaggag
caggatcgagctggcctccagcagtccacctggcacacaactgcaatggatgacttcaca
gccttccagaggaaatggtttgaagttgcatttgtggcagaagaaaccttgcactctgag
ctgccagcctttctgctaccttggttacccagtcgcccagcctcatatgcaagtagacac
agctctttcagtcgcagcttcggaggccgcagccaggcagctgcactgttagcagccaca
gttccagagcagcgaacagtgaccttggatgtgaataaccgcagtaaccggctggaatgg
tgcagctgctactatcatggcaacttctcactgaatgcggcctttgaggtgaaattgcac
tggatggcgctgacagctcctgtgctctgtgaaatggttcagggctggcaccggaaagcc
acatcctgtggctttctgttggttcccgtcctggagggcccatttgctttgcccagttac
ctatatggggatccactgcgtgcacagctcttcattcctctgaatatcagctgtttgctg
aaggagggcagtgataatctgtttgatggttttgaccctgaaacctactgggatcgtatg
catctttttcaggaggcgattgcatacaggtttggatttattcaggacaaatattccgct
tcagcttttaatttcccatcagagaacaaaccacagtacattcatgtaacagggactgtc
tttctacagctgccatattccaggaggaaatattcctctggacagcaacgccgccgacgc
aattccaccagctccaccaatcagaacatgtttgctgatgagcgcattggctacaactgg
gcctacaacaccttgttaactaagacatggcgctccagtgccactggtgatgagaaattt
gctgaccggttgctcaaggatatcacagacttctgtgctaacaaggacaaccgtttgctg
gccttctggacaaactgcctggataaaatgcatgctagtgcaccatga
DBGET
integrated database retrieval system
