Geotrypetes seraphini (Gaboon caecilian): 117366028
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Entry
117366028 CDS
T09159
Symbol
PTAFR
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04020
Calcium signaling pathway
gsh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117366028 (PTAFR)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117366028 (PTAFR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
gsh04030
]
117366028 (PTAFR)
G protein-coupled receptors [BR:
gsh04030
]
Rhodopsin family
Others
Platelet activating factor
117366028 (PTAFR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CitMHS
Motif
Other DBs
NCBI-GeneID:
117366028
NCBI-ProteinID:
XP_033812950
UniProt:
A0A6P8S466
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Position
8:13873650..13893039
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AA seq
351 aa
AA seq
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MDTHLSSSNSSSCQVDSNFRYSFFTITYSMIFILGFIANCYVLWVFTRVYPSRRLSEIKI
FMLNLTMADLLFLVTMPLWIVYYHNQGDWIMPSFLCNLAGCFFFINTYCSVAFLGVISYN
RFQAVTRPVETAQSTARKRGILISCSIWLIIVSSASYFLFDSGTNMKVSEMGNVTRCFED
YSSTSNTLLVAIHFLLIGVFFIIFLIILVCNLIIIRTLLSQPANVRQSTSVKHRALWMVC
AVLAVFIVCFVPHHMIHGPWTLTVLEIWQKDNCALRQRLNDAHQVTLCLMSTNCMLDPII
YCFLTKKFRRHLMEHIKSMGGSRKCSRQTTETGLEAGMVPLNELAVDSIRK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggatacccacctgtcttcttccaacagcagctcctgccaggtggattccaattttaga
tacagcttcttcaccatcacctacagcatgatattcattttgggtttcattgccaactgc
tatgtgctttgggtgtttacccgggtgtacccctccaggaggctgagtgagatcaagatc
tttatgctgaaccttaccatggcagacctgcttttcctggtcaccatgccactctggatt
gtatattaccataaccagggggactggatcatgcccagtttcctctgcaatctggctggc
tgcttcttctttatcaacacttattgttcggtggcatttcttggagtcatcagctacaac
cgcttccaagctgtcaccaggccagtggaaactgcccaatccactgccaggaaacgtggt
atcctaatatcttgttctatatggcttatcattgtcagtagtgcctcctatttcctcttt
gacagtggcacaaatatgaaagtgagtgaaatgggcaacgtcacccgatgttttgaggac
tacagcagcacaagtaacactttgctggttgctatccacttcctgttgattggggttttc
ttcatcatctttctgattattctggtgtgcaacctgatcattatcaggacgctgctgtcc
caacctgcgaacgtcaggcagagtaccagtgtgaagcatcgggcactctggatggtctgt
gcggtcctggcagtcttcatcgtctgctttgttcctcaccacatgatccatggaccctgg
actctgacggtcctggaaatatggcagaaggataactgtgccttgcgtcaacgtctgaat
gatgcccatcaggtgactctatgtcttatgagtaccaactgcatgctggaccccatcata
tactgttttcttaccaaaaagttccggcgacatcttatggagcacatcaagagtatgggt
ggtagccgaaagtgttcccggcaaaccacagaaacaggcctggaagctggtatggtgccc
cttaacgagcttgctgtagactccattagaaagtaa
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