Geotrypetes seraphini (Gaboon caecilian): 117366321
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Entry
117366321 CDS
T09159
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117366321 (SOX2)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117366321 (SOX2)
BRITE hierarchy
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117366321
NCBI-ProteinID:
XP_033813459
UniProt:
A0A6P8S5X3
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All DBs
Position
9:177116933..177119111
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AA seq
313 aa
AA seq
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MYSMMETDLKPPAPQQASGGTGNANSAGGNPKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNGMSAGVGVGASLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQH
PGLNAHSAAQMQPMHRYDVSALQYNSMAGSQTYMNGSPTYSMSYSQQGTPGMTLGSMGSV
VKSESSSSPPVVTSSHARAPCQAGDLRDMISMYLPGAEVPEPAPPSRLHMTQHYQGAPVP
GTAINGTLPLSHM
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggagaccgatctgaagcctcccgccccccagcaggcttcggggggc
acgggcaacgccaactcggccggcggcaaccccaaaaacagccccgaccgggtcaagaga
cccatgaacgccttcatggtgtggtcgaggggccagaggaggaaaatggcgcaggagaac
cccaagatgcacaactcggagatcagcaagcgcctgggcgccgagtggaaacttttgtcc
gaggccgagaagcgacccttcatcgacgaggctaagcgcctaagagcgctgcacatgaag
gagcatccggattataaataccgaccgaggcggaaaaccaagactctgatgaagaaggat
aagtacacgttgcccggcgggctgctggccccggggggcaacggcatgagcgccggggtc
ggagttggggcgagcttgggcgcgggggtgaaccagaggatggacagctatgcgcacatg
aacggctggaccaacgggggctacgggatgatgcaggagcagctcggttacccccagcac
ccgggcttgaacgcgcacagcgccgctcagatgcagcccatgcaccgctacgatgtgagc
gccctgcagtacaactccatggccggctcgcagacttacatgaacggctcgcccacctac
agtatgtcgtactcccagcaggggacccccgggatgaccctgggatccatgggctcggtg
gtcaagtcggagtccagctccagcccgcctgtagtcacttcttcccatgccagggctccg
tgccaggcgggggacctccgggacatgataagcatgtatctgccaggggctgaagtgcca
gaaccggcccccccaagcagactgcacatgacacagcattatcagggtgcacctgtcccc
ggcacagccattaatggtacactccctctatcacatatgtaa
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