Geotrypetes seraphini (Gaboon caecilian): 117366523
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Entry
117366523 CDS
T09159
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117366523 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
117366523 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117366523 (PDLIM5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
PDZ_2
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
117366523
NCBI-ProteinID:
XP_033813853
UniProt:
A0A6P8S7G5
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All DBs
Position
1:complement(328912890..329381065)
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AA seq
934 aa
AA seq
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MSNYSVSLVGPAPWGFRLQGGKDFSMPLTISKLIDGGKAARANIGIGDVVLTVDGISADG
MTHLEAQNKIKACTGSLNLTLQKVPAAPKPQPSPAHKDEPRELFKPVPIASPTPAAPKVA
STTSVAYNKAPRPFGAAPSPKTTSIPSASSAFTPPSMAVSSRASPPPNALSMLAAVTPPP
PATPGMRTSPRPSSDEYSPAPSAAKATVNVPRQPAMYGTAVNLRSAEHVQEVVEGQRRGD
AESQGDSRHQNGKIPPKRPPRKHIVDTYTEFYHTPTLSDASKKRLIDNTEDWHPRTGTSQ
SRSFRILAQITGTERMSEPEQEEVKKPNQKPLQSTSANLYNGVETQTASASPAKESVSTQ
TCENQALSVNPLTPPPVLSPESAPTNFSVAEPPPSSPLPPLPSTPSSGLVLSASPERKVL
FDNPLEFLPKCAPHPPPIIGFLSVNTQTAVISKTATAYARLVVNIADSATLESSPGMLSS
LTKKAHVKTSSAASCTVATQTSQLDESSCVPVTPFPAEPEKDLGPMQPPDSNRHITVPLS
LEKGSLVQVTSTESRSSYTHSSFSTGKLFPESPLESQPKFAPSPLLPKLSPRNKSSAAAA
ISAAVVQARLSSPFIYRSLLDALLITPITKPPLQGKLPDRKSTGGLNIENSTVMEPVQSS
AYTAATTKSMPWSPENNSRPSSQGMALKSTGSPSSMKPAGWQAGNPAAPVTARIFNSNAS
SGTKMPSNRPVLQLSLNERDTLVQRAEHIPAGKRTPMCAKCNMVIRGPFLLALGKSWHPE
EFNCAYCKNSMAETGFVEEKGDLYCDLCYEKFFAPQCARCQRKILGEVINALKQTWHVSC
FVCVACHKPISNNVFHLEDGDPYCEMDYYSLFGTMCRGCDFPIEAGDRFLEALGTIWHDT
CFVCAVCCESLEGQTFFSKKDKPLCKKHAHAVNF
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagcgtgtctctggttggtccagccccctggggtttcaggcttcaaggt
ggtaaagatttcagcatgcctttgactatctccaagctaattgatggtggaaaggcagct
cgtgcaaacattggaataggggacgtggttctgaccgttgatgggataagtgctgatgga
atgactcacctggaagcccaaaacaagataaaggcctgcacaggctccttgaatttgact
ctacaaaaagtaccagctgcaccaaaacctcaaccttctcctgcacataaggatgagccc
agagaactatttaaacctgtgcccatagcatctcctacccctgctgcgcccaaagtggca
tccactaccagtgtcgcctacaataaagcacccaggccatttggagcagcgccttcgcca
aaaaccacctccattccatccgcatcctccgccttcaccccgccttccatggctgtttca
tcacgtgcctcccctccaccaaatgccttgtccatgttggctgcggtcacgccacctcca
cccgctacacctggaatgcgcactagtcccaggcctagcagcgatgaatattcaccagca
ccaagtgctgctaaagctacagttaatgtcccacggcagcctgccatgtacggtacagca
gtgaacctgcgttccgccgagcatgtccaagaggtggtcgaggggcagagaagaggagat
gcagaaagccaaggggacagtagacaccaaaatgggaaaatcccaccaaaacgaccacca
cgaaagcacattgtggatacttacacggagttttaccacacaccaaccttaagtgatgcc
agcaagaaacggctgattgataacactgaagactggcatccccggacaggaacctcccag
tctcgttctttccgcatccttgcccagatcactggcaccgagcgtatgtcggaacctgag
caagaagaagtgaaaaaaccaaaccaaaaacctctccaaagtacgtctgccaatctgtat
aatggagtagaaactcagactgcctccgccagtcctgccaaagagtcggtatccactcag
acctgtgagaatcaggctttgtcggtaaatccactgactcctccgccagttttaagccct
gaatctgctccaaccaacttctctgtggcagagcccccacccagctctcctcttcctcca
cttccttctacaccgtcttctgggcttgttctttcagcttcaccagagagaaaggtactg
tttgataatcctttggaattcctgccaaagtgtgcccctcatccaccacctatcatcggg
ttcttaagtgtcaatacccaaacagcagtgatatccaaaacagcaactgcttatgctagg
ttagtagtaaacatagctgactctgcaacattagaaagtagtccaggaatgttgagctca
ctgacgaaaaaagctcatgtcaagacctcttctgctgcgtcatgtactgtggctacacag
acctctcaactggatgaatcctcttgcgtgccagtgactccattccctgcagaaccagag
aaggatctcggtcccatgcagcccccagactccaacaggcatatcactgtgccattgtct
ctggagaaaggaagccttgttcaggtcacaagcaccgagtctagatcttcttatactcat
tcaagcttctctactggaaagcttttcccggaaagtcccttggagagccagcccaagttt
gctcctagtcctctgcttccaaagttgagtccccgaaataagagcagcgctgcggctgca
atctctgctgccgtggtgcaagccagactctccagtcctttcatctatcgctctcttctg
gatgcccttctcatcacgcccatcaccaagccacctctgcagggcaagctgcctgacagg
aagtcaacagggggcttgaatatagagaacagtactgttatggagcctgtacagtccagt
gcttacactgctgccacgacaaagagcatgccatggtctccagagaacaacagccgacca
tcttcgcagggtatggctttgaaatctacagggtcacccagtagtatgaaacctgcaggc
tggcaggctggtaacccagcagcacctgtaactgcaaggatttttaacagtaatgcttca
tctgggacaaagatgcctagcaacaggcctgtcctgcagctttcactcaatgagagagac
acactggttcagagggcggagcatatcccagctggaaaacgtacgccaatgtgtgccaaa
tgtaatatggtcattagaggaccttttctattggctttggggaaatcctggcatcctgag
gagttcaactgtgcttactgcaaaaacagtatggctgaaactggatttgtggaagagaaa
ggagacctctattgtgacctttgctatgagaaattttttgctccacaatgtgcccgttgc
cagaggaaaatcctaggtgaagtcatcaatgctttgaagcagacttggcacgtttcctgt
tttgtgtgtgtggcctgtcataaacctatcagtaacaatgtcttccatttggaggatggt
gatccctactgtgagatggattactactccctctttggtacaatgtgtcgtggctgtgac
ttccccatagaagctggagacaggtttctggaagctctgggcactatctggcatgatacc
tgctttgtgtgtgcggtatgttgtgaaagtttggagggtcagacgttcttctccaagaaa
gataagccactgtgcaagaagcatgctcatgctgtgaacttctga
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