Geotrypetes seraphini (Gaboon caecilian): 117366556
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Entry
117366556 CDS
T09159
Symbol
STAG1
Name
(RefSeq) LOW QUALITY PROTEIN: cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117366556 (STAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117366556 (STAG1)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117366556 (STAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
117366556
NCBI-ProteinID:
XP_033813925
UniProt:
A0A6P8S6E9
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Position
9:92152286..94226601
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AA seq
1263 aa
AA seq
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MITSELPILQESTNESTTTAAITITHQDVNSELEEPEVKGKRKRCRPGRPPSANKKPRKY
PGEKSRAELGTKGPGRGRANGHPQQNGEGDPVTLFEVVKMGKSAMQSVVDDWIESYKQDR
DIALLDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKK
FRSNFCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTAL
VNVALNLSIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQEIIENMMNSIFK
GIFVHIYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKA
LQSLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDC
ENVYHLVYSAHRPVAVAAGEFLHKKLFSRHDPEAEEALAKSRGRNSPNGNLIRMLVLFFL
ESELHEHAAYLVDSLWESSQELLKDWECMTELLVEEPVQGEEVMSDRQESALIELMVCTI
RQAAEAHPPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIIALPMLLSKYSADAEKVANLL
QIPQYFDLDIYSAGRMEKHLDGLLKQIKFVVEKHTESDVLEACSKTYSILCSEEYTIQNR
VDISHSQLIDELVDRFSHSVEDLLQEGEEADDDDIYNVLSTLKRLTCFHNAHDLTKWDLF
GNCYRLLRTGIENGAMPEQIVVQALQCSHFSILWQLVKITEGSPSKDDLLILRKTVKCFL
AVCQQCLSNVNTPVKEQAFMLLCDLLMIFSHQLTTGGREGFLPLVFNPDLGLQSELLNFV
MDHVFIDQDEENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHAAADIFKHY
MKYYNDYGDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIK
ELARRFALTFGLDQIKTREAVATLHKDGIEFAFKYQNPKGLEFPPLNLAFLEVLSEFSSK
LLRQDKKTVHTYLEKFLTEHMMERREDVWLPLISYRNSLVTGGEDDRMSVNSGGSSSKSS
SIRTKKGRPPLHKKKVEDESMDSSWMTRNDTIQTPGTLHTPQLTSTVMRENPRQMAEHIQ
EHESDHGSEPDFLHNSQMQMSWLGQQKLEDLNRKDRTMSYMKVRTGVRHAVRGLMEDDAE
PIFEDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAIIEDDSGFGM
PMF
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttcagagttacctatactacaggaatctacgaatgaatctactaccacagct
gccattactattacacatcaagatgttaacagtgaacttgaagagcctgaagtcaaagga
aagagaaaaaggtgccgccctggtagacctccatctgcaaataagaagcctcgaaagtat
ccgggtgaaaagagtcgtgcagaacttggtaccaaaggaccaggacggggaagagctaat
ggccatcctcagcaaaatggtgaaggggatccagtcacattatttgaagtagtgaaaatg
ggcaagagtgctatgcagtctgtagttgatgactggattgaatcttataaacaagacaga
gacattgcgcttctggatttaataaacttctttatccagtgctcgggatgtaaaggtact
gtcagaattgaaatgttcagaaacatgcagaatgcagaaataatcagaaaaatgactgaa
gaatttgatgaggatagtggcgattatcctcttactatgcctggcccacagtggaagaaa
tttcgatcaaacttttgtgagttcattggtgttctgatcaggcagtgccagtacagcatt
atttatgatgaatacatgatggatactgtgatttctctgttgactggtctttcagattct
caagttcgagcttttaggcataccagtacactagctgccatgaagctaatgacagctctc
gtgaatgtagccctaaaccttagtatccatcaagataatactcagaggcagtatgaagca
gaacgcaacaaaatgattggtaaacgagccaatgaaaggctggagttgctgttacaaaaa
cggaaagagttgcaagaaaaccaagagataattgaaaatatgatgaattctatttttaag
ggtatatttgttcatatataccgggatgctattgctgagattagagctatttgtattgaa
gaaattggggtgtggatgaaaatgtacagtgatgcatttcttaatgacagctatttaaag
tatgtgggctggactcttcatgacaggcaaggcgaagtgagattgaagtgtctgaaagca
ttgcagagcctatacacaaatagagagctgtttcctaaactggagctgtttaccaacaga
ttcaaggatcgcattgtatcaatgacactggataaagaatatgatgttgctgtggaagct
atccgattggttacactaatacttcatggaagtgaagaggctctgtcaaatgaagactgt
gaaaatgtttatcatctagtgtattctgcacatagacctgtggctgtagcagcaggggag
tttctgcacaaaaaattgttcagtaggcatgacccagaggcagaggaagcattggcaaag
agcagaggacgaaacagtcccaatggcaaccttatccgcatgctggtgcttttctttcta
gaaagtgagttgcatgagcatgcagcttatttggtggatagcttgtgggaaagctctcaa
gaactgttgaaagactgggaatgtatgacagaattgctggtggaagaaccagtccaaggg
gaagaagtgatgtctgatcggcaggaaagtgctcttatagagctgatggtgtgtactata
cggcaggctgctgaagcacatcctccagtgggtagggggactggcaaaagggtactaact
gccaaagaaaggaaaactcagatagatgataaaaataagctgacagagcatttcattatt
gcacttccaatgttgttatcaaagtattctgcggatgcagaaaaggtggcaaaccttctg
cagattcctcagtattttgatctggatatctacagtgcaggtagaatggagaagcaccta
gatggcttgttaaagcagattaagtttgtggtagaaaagcacacagagtcagatgtgctg
gaagcctgcagcaaaacatacagtatcctatgtagtgaagaatacactatacagaacaga
gtggacatctcccatagccagctaatcgatgaactcgttgataggttcagccattctgtg
gaagacctgctgcaagagggtgaagaagcagatgacgatgatatatacaatgtgctttca
acactcaagagactaacttgctttcataatgctcatgaccttacaaaatgggatctattt
ggtaactgctacagattgctgaggacaggcattgagaatggagccatgccagaacagata
gttgtacaggcgttgcaatgttctcatttctctattctttggcaactagtgaaaatcact
gaaggttcaccttccaaagatgatttgttgatattgagaaagacagtgaagtgttttctt
gcagtttgccagcaatgcctttcaaatgtcaacactccagtaaaggaacaggccttcatg
cttctctgtgatctcttgatgatatttagccatcagttaactacaggaggcagagagggt
tttctgcctctggtgttcaatccagacttggggcttcagtcagagcttctcaacttcgtg
atggatcatgtcttcattgaccaagatgaagagaatcaaagcatggagggagatgaagag
gatgaagctaacaaaattgaggccttacataaaaggaggaatcttctagcagcttttagc
aaactgatcatctatgatattgtggacatgcatgcagctgcagacatcttcaagcactat
atgaagtattacaatgactatggggatatcatcaaagaaacactgagtaaaaccagacaa
atcgataagattcagtgtgccaagacactcattctcagcctacagcagctgttcaatgag
cttgtacaggagcaaggtcccaacctggacaggacgtctgcccatgttagtggaattaag
gagcttgctcgcagatttgccctcacctttggtctggatcagattaagactagagaggct
gtggccacgctacacaaggatggcatagagtttgccttcaaataccaaaatcccaaagga
ttggaattcccacctctgaatcttgcttttctagaagtactgagtgaattttcttcaaaa
ctcttacgccaggacaaaaaaactgtgcacacatacctggaaaagttcctgacagaacat
atgatggagaggagggaagatgtgtggctaccactcatctcctacaggaattcactggtc
actggaggcgaggatgacagaatgtctgtcaacagtggaggcagcagcagcaagtcttca
tccatcaggaccaagaaagggcgaccccctcttcataaaaaaaaagttgaagatgagagc
atggatagttcatggatgaccagaaatgataccattcagactcctggcaccctacataca
cctcagctcacctcaactgtgatgagagagaacccaagacagatggcagagcatattcag
gagcatgaatcagatcatggttctgaaccagacttcctacataattctcagatgcagatg
tcatggttgggccagcagaagttggaagacttaaatcgaaaagacagaacaatgagctat
atgaaagttagaactggtgtgagacatgcagtccgaggcttgatggaggatgatgctgaa
ccaatctttgaagatgtgatgatgtcttcacggggacagctagaggatatgaatgaggag
ttcgaggacaccatggttattgatttgcctccttcaaggaacagacgagagcgggccgaa
ctgaggccagacttttttgattcagcagctataatagaagatgattcgggttttggaatg
ccaatgttctga
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