KEGG   Geotrypetes seraphini (Gaboon caecilian): 117366679
Entry
117366679         CDS       T09159                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03020  RNA polymerase
gsh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117366679 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117366679 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gsh03021]
    117366679 (POLR2D)
   03400 DNA repair and recombination proteins [BR:gsh03400]
    117366679 (POLR2D)
Transcription machinery [BR:gsh03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     117366679 (POLR2D)
DNA repair and recombination proteins [BR:gsh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117366679 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 117366679
NCBI-ProteinID: XP_033814264
UniProt: A0A6P8S7X9
LinkDB
Position
9:complement(126875517..126899896)
AA seq 142 aa
MAAGINDLLAGDVEEDASQLVFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggctgctgggattaacgatctgcttgctggggatgtggaggaggatgcgtcccagctc
gtctttcccaaagagtttgaaaatgctgaaactcttctgaactcagaggtgcatatgttg
ctggaacatcgtaagcagcagaatgagagtgctgaagatgagcaggaactatctgaggtc
tttatgaaaaccctgaattacactgctcgtttcagccgtttcaagaaccgtgaaaccatt
gctagtgtgcgcagtttgttgctccagaagaagctacataaatttgagttggcttgcttg
gctaatctgtgccctgagacagctgaggaagctaaagcacttatacccagcctggaggga
cgctttgaggatgaagaattgcagcagatacttgatgacattcagacaaaacgaagcttc
cagtattag

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