Geotrypetes seraphini (Gaboon caecilian): 117366727
Help
Entry
117366727 CDS
T09159
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04510
Focal adhesion
gsh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117366727 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117366727 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
ATG17_like
LAMB1
F5_F8_type_C
DUF7823
Motif
Other DBs
NCBI-GeneID:
117366727
NCBI-ProteinID:
XP_033814369
UniProt:
A0A6P8S862
LinkDB
All DBs
Position
9:complement(34149496..34292561)
Genome browser
AA seq
1783 aa
AA seq
DB search
MVSPWTKLRPLPRLKVSWAAEGILAQEPEYSYGCGEGSCYPATGDLLIGRAQQLFASSTC
GLRKPEPFCIVSHLQEEKKCFTCNSVEPYNEVFNTDSHQIENVVTTFAPNRLDMWWQSEN
GLENVTLQLDLEAEFHFTHLIMTFKTFRPSAMSIERSSNFGQTWQVYRYFAYDCETSFPG
ISNGPMKKVDDIICDSRYSDIEPSTEGEVIFRVLDPAFRIEDPYSPRIQNLLKITNLRIK
FLKLHTLGDDLLDSRLEIKEKYYYAIYDMVVRGNCFCYGHASECAPVNGYTDDIAEGMVH
GHCMCRHNTKGLNCEQCMDFYHDLPWRPAEGRSSNACKKCNCNEHATKCHFDKAVYMGTG
NSSGGVCDECQHNTMGRNCEQCKPFYYQNPEKDIRDPNICEPCNCDPTGSQNGGICDRYT
DFSVGLIAGQCRCKFNVEGERCDQCKEGFYELSADDPLGCQPCGCNPLGTLSGGNPCDSE
SGYCYCKRLVTGRTCDECLPEHWGLSNDQDGCRPCDCIPGGSLNNNCSPETGQCQCRSHM
IGRRCHEVESGFYFVALDHYTYEAEEAHFGPGVSLVERQYPPDRIPSWTGVGFVRVPEGA
YLEFYIDNIPFSMEYDLLIRYEPQLPEQWEEALITVLRPGKIPASSRCGNTVPDDDNQVV
SLSPGSRYVVLPRPVCFEKGMNYTVRLELPRYSSSVDVENPYTLIDSIVLLPHCQSLDMF
TTGGSGNAWEMFQRYRCLENSLSVVKTPMTEVCKNSIFSISALIHEGALSCKCDPQGSLS
SVCNPNGGQCQCRPNVVGRNCDRCAPGTYGFGPHGCRSCECNLQGSAHSFCHPETGQCPC
VHGAYGRQCDRCLPAHWGFPNCRECQCNGHDDDCDPITGACLNCRDYTDGHNCERCFAGY
YGDPTLGSGDHCRPCPCPDGPGSGRQFASGCYQDPVTMQVICSCNFGYTGIRCDECASGF
FGNPGEIGGICQQCQCNNNIDITDPEACDKHSGICLKCLYHTKGERCQQCQLGYYGNALQ
QDCRKCVCNYLGTAHEHCIEEDDCQCNQSTGQCPCLPNVVGQSCDRCAPHTWKLASGTGC
EPCACDAARSLGPSCNEFTGQCRCMPGFGGRTCSDCQEFYWGDPNVECRACDCDSRGIQI
PQCNRSTGWCVCNKGVEGPRCDKCARGYSGTFPDCAPCHQCFALWDIIIKELSNKTQWLL
EKANTVKFSGVVGPYQQTVNSMEEKLNEIKSILAQNPAAQPLQNIENLFEEAEKLKRDVS
EKIAELEKNLAEVENNQTEGDLSALQAEAEKLGNVVKELGEQLEFIKISDVRGAMDSISK
YFQMSLEAEAKSNFSTMNPDGLVAQSAATRQKVEDLLLKNEAWFKEEQEDQSRLLDELAG
KLQSLDLSTVAEKTCGTPLGASCTDTECGGLNCRTEDGGKKCGGPDCGGLVTTAHDALEK
AMNFDREILSVLAEVEQLSKMVSESRVRAEEAKQSAQEVLLKTNATKEKVDKSNEDLRSL
IKQIREFLMQDGADLDSIEAVANEVLKMEMPSTPEQMQSLTDEIRKRVESLSDVEIILQQ
SAEDIEKAEMLLDEAKEASNSASAVKATADMVKEALEEAEKAQTAAEKAIKQANKDIQGT
QDLLTSIESETSVSEETLQNATERLAQLEKNVEELQRKAAVNADSVEEVQATVDNVKESA
EQVKKVLDSELNDKYKTVEDLIAKKTGDSADARKKAERLQTEAKTLLAHANNKLQLLRDL
EKTYEKNQKILEDKARQLVELEETVRSLLQAISQKVAIYSTCL
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atggtttctccctggacaaagctaaggccgctcccacgtctgaaagtgtcatgggcagca
gagggcatcctagctcaggagcctgagtatagctatggctgtggcgagggcagctgctac
cccgccactggagacttgctgattgggcgggcccagcagctctttgcctcctccacatgt
ggtctccgtaagcccgagcccttctgcatcgttagccacctgcaggaggaaaaaaaatgt
tttacttgcaattctgtggagccctacaatgaagttttcaacacagatagccatcagatt
gaaaatgtggtgacgacatttgctcctaatcgtctggatatgtggtggcagtcggagaat
ggcttggaaaatgtaacactgcagctggacctggaagccgagttccatttcactcatctt
atcatgaccttcaagaccttccgcccatcagcaatgtcgattgaaagatcatccaatttt
ggacaaacctggcaagtgtatcgttattttgcctatgactgtgagacctcgttcccaggc
atttccaacggaccaatgaaaaaagtagatgacataatctgtgattcccgatattctgac
atcgaaccttccactgaaggagaggttatttttcgggtcttggatcctgcttttagaatt
gaagatccgtacagtcccaggattcagaatctactgaaaatcacaaacttaagaattaag
ttcctgaaactgcatactttgggcgatgacctgctagattcccgactggaaatcaaggag
aaatactactatgccatttatgatatggtggttcgtggcaattgtttctgctatgggcat
gccagcgagtgtgcgcctgtgaatggttacaccgatgacatcgctgaagggatggtgcat
ggccattgtatgtgcagacataacaccaaaggcctgaactgtgaacagtgtatggacttc
tatcatgacttgccttggagacctgctgaaggtcgcagcagtaacgcatgcaaaaaatgc
aactgtaatgaacatgctaccaaatgccactttgataaggcggtttacatgggaactggg
aacagcagtggcggtgtgtgtgacgagtgccagcataacacaatgggacgcaactgcgag
cagtgtaaacccttttactaccagaacccagagaaagacatacgtgaccccaacatctgt
gaaccatgcaattgtgacccaactggttctcaaaatggtggcatctgtgatcgctacact
gatttttctgtgggcctcattgctggacagtgccgctgtaaattcaatgtagaaggcgaa
cgttgtgatcagtgcaaagaaggcttctatgaattgagtgcagatgatccactgggatgt
caaccttgtggatgtaatcctctgggaactctatctggtgggaatccgtgtgattcggaa
tcgggatactgctattgcaaacgccttgttacaggaaggacgtgtgatgagtgtctgcct
gaacactggggtctgagcaatgaccaggacggatgccgaccttgtgactgtatccccggg
ggatcactgaacaataactgttcaccagagactggtcagtgccagtgcaggtcgcacatg
attggacgtaggtgtcatgaggtggaatctggattttactttgttgcattagatcattat
acgtatgaagcagaagaagctcattttgggcctggcgtaagcctagtggagcggcagtat
cctccagatcgtatcccatcctggactggggtaggctttgtgagagttccagaaggtgcc
tatttggaattctacattgacaatattcctttctcgatggagtacgatcttctcatccgc
tatgagccacagttacctgagcagtgggaagaggctctaataacagtgttacgtcctggc
aaaatccctgccagcagcaggtgtggcaacaccgttcctgatgatgacaaccaagtggta
tccttgtcaccaggctcaagatatgtagtcctgccacgcccagtgtgctttgaaaaagga
atgaattacactgttcgactggaactgccacgctattcctccagtgtggatgtggaaaac
ccgtacaccctaattgattctattgttcttttgccccactgccagtctctggacatgttc
acaactggcggttcagggaatgcctgggaaatgtttcagagataccggtgtctcgagaat
agcttgagtgtggtcaaaacccctatgacagaagtctgtaagaatagtatcttcagtatc
tctgcgctgattcacgagggagccttatcttgcaagtgtgatcctcagggctcgctgagc
tctgtgtgcaatcctaatggaggacagtgccaatgccgtcctaatgtggtgggaagaaat
tgtgaccggtgtgctcctggtacttatgggtttggcccacatggatgcagatcttgtgag
tgcaatctgcaaggctcagcacattctttctgccatcctgagactggtcagtgcccctgt
gttcatggggcctatggtagacagtgcgacagatgcttgcctgctcattggggatttcct
aactgccgagagtgtcagtgtaatggccatgatgacgattgtgatcccattaccggcgcg
tgcctgaactgtagagattacacagacgggcataactgtgagagatgttttgctggatac
tatggagatcctacactggggtcgggagatcactgccgaccttgcccttgtcccgatggc
ccaggaagtggacggcagtttgcaagcggctgttaccaggatcctgtcactatgcaggtg
atctgttcctgtaactttggatacacaggtatccggtgcgatgaatgtgcttcggggttc
tttggaaaccctggggagattggcggaatttgtcagcagtgccagtgcaacaacaacatt
gacatcactgatccagaagcctgtgacaagcattcggggatatgtctgaagtgcctgtac
cacaccaagggggagcgctgtcagcagtgccagcttggctattatggaaacgctctgcag
caggactgcagaaagtgtgtctgcaattacctgggcacagcccatgaacactgtattgaa
gaggatgactgccagtgcaaccaaagcacgggccagtgtccatgtctgccaaatgttgtt
ggccagagctgtgatcgctgtgcaccacatacgtggaaattggccagcgggacaggatgc
gaaccttgtgcttgtgacgctgctcgctctcttgggccctcttgtaatgagttcactggg
cagtgtcggtgtatgcctggctttggagggagaacctgcagtgattgccaggagttttac
tggggtgaccctaatgtggaatgtcgagcctgtgattgtgactctcgaggtattcagata
cctcagtgtaatcgctctacagggtggtgtgtttgtaacaagggtgttgaaggaccacgt
tgtgataagtgtgcccgtggatactctggaacgttccctgactgcgcaccctgccatcag
tgctttgccctctgggacatcatcatcaaagagctaagcaacaagacgcagtggcttctg
gagaaagccaacaccgtcaaattcagtggcgttgtcggcccctaccagcagacggtcaat
tccatggaagaaaaactgaatgaaattaagagcatcctcgcccagaatcctgctgctcag
cctctccagaacattgaaaatctctttgaggaagcagagaagttaaaaagagatgttagt
gaaaagatagccgaactagagaaaaacctggctgaggtggagaataaccagacagaaggg
gatttgagcgctctgcaggctgaggcagagaagctggggaatgtggtgaaagagctggga
gaacagctggagttcatcaaaatctctgatgtccggggggcaatggacagtatcagcaaa
tattttcaaatgtctctagaagcagaagcaaagtccaatttctccaccatgaacccagat
ggtttggtggcccagtctgccgcaacacggcaaaaggtggaagatttattactcaaaaac
gaggcctggttcaaggaggagcaggaggaccagtcgcgcctcttggatgaacttgctggc
aagctacaaagtctggatctatctacagttgctgaaaaaacctgtggaactcctctgggg
gcttcttgcactgacaccgaatgcggaggcctgaactgcaggacagaagatgggggcaaa
aagtgtggcggacctgactgcggtggcttggtgaccacagctcatgatgctttggagaag
gccatgaactttgaccgagagatcctgagtgttctggctgaagtcgagcaactctccaaa
atggtatctgagtccagggtgagagcagaagaagcgaagcaaagtgcccaagaagttctt
ttgaaaaccaacgccacgaaggagaaagtggacaaaagcaacgaagatctgagaagcctc
atcaagcaaatccgagaattcctgatgcaggatggcgctgacttggacagcattgaggct
gtggctaacgaggtgctaaagatggaaatgccaagcactcctgaacagatgcaaagcctg
acggacgaaatccgtaaacgtgtggaaagcctttccgatgttgagataatactgcagcaa
agtgctgaagacattgagaaagctgagatgctcctggatgaagccaaggaggccagtaat
agtgcatccgctgttaaagctacagctgacatggtgaaggaagccctagaagaagccgag
aaggctcagactgctgcggagaaggccattaaacaggcaaataaggacattcaaggcacc
caggacctccttacctcgattgaatctgaaacttctgtgtcagaagaaacattgcagaat
gccactgagcgccttgcccagctggagaagaacgtggaagagcttcaacggaaggcagcc
gtcaatgctgattctgtagaagaggtacaggccaccgtggataatgtgaaagagagtgcc
gagcaggtgaagaaggtactagacagtgaactgaatgacaagtataaaaccgtggaagac
ctaattgccaaaaaaacaggggattccgcagatgctaggaagaaagccgaacgactacag
acggaagcaaaaacattattagctcatgcaaacaacaaactccagctgctgagagatttg
gaaaaaacatacgagaagaatcagaaaatcttagaagacaaagccagacagctggtagag
ctggaagaaacggtccgctcactcctacaggcaatcagccagaaggtggcaatctacagc
acctgtttataa
DBGET
integrated database retrieval system
