Geotrypetes seraphini (Gaboon caecilian): 117366780
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Entry
117366780 CDS
T09159
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04136
Autophagy - other
gsh04140
Autophagy - animal
gsh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117366780 (ATG16L1)
04136 Autophagy - other
117366780 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117366780 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117366780 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
gsh03029
]
117366780 (ATG16L1)
Membrane trafficking [BR:
gsh04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
117366780 (ATG16L1)
Others
Rab GTPases of specific organelles
Auto phagosome
117366780 (ATG16L1)
Mitochondrial biogenesis [BR:
gsh03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117366780 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
NBCH_WD40
eIF2A
Ge1_WD40
HEF_HK
CCDC93_CC
V_ATPase_I
Syntaxin-6_N
Motif
Other DBs
NCBI-GeneID:
117366780
NCBI-ProteinID:
XP_033814516
UniProt:
A0A6P8SF98
LinkDB
All DBs
Position
9:124447214..124718389
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AA seq
627 aa
AA seq
DB search
MASGCRPASFPHWKVHICKELRQRDRLQRQAFEELIVQYNKLLEKSDLRSVLADKLQTEK
YDLQSKHDFSPGHEGMRNEALLQEMSQIRIKHQEELTELHKKRGELAQTVIDLNNQMLQK
DKEIQANEAKIAEYSQTIADLKKECQELYSKLQDLERANQTLKDEYDALQITFNALEEKL
RKTTEDNQELVSRWMAEKAQEANRLNAENEKDSKRQQARLQKELAEAAKEPLSLEQDDDI
EVLEEAHDPARETSPVRAISRTSSKRLSQPAGSLLDSITNIFGVCESPSLGHHSADAVRR
RSLSTFPSAADNIETLPAGRTEVRVPNTALYVFDAHDGEVNAVRFSPGSRLLATGGMDRR
VKLWEVIGDKCEIKGALSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLT
GHSGKVLSAKFLLDNARIVSGSYDRTLKLWDLRSKVCIKTVFTGSSCNDIVCTEQCVMSG
HFDKKIRFWDIRTESIVRELELQGRITALDLNPERTELLSCSRDGLLHIIDLRVIAVRQT
FNSQGFKCGADWTRVIFSPDGSYVTAGSADGTLYFWNVLTGKVERMLTKHQTEHGLSCSI
NAVAWSPSGTHVVSVDKGSKAILWSEL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggctgccgaccggccagtttccctcactggaaggtgcatatctgtaaagag
ttgaggcagagggaccgactacagagacaggccttcgaggagctcattgtacaatataat
aaacttttggagaaatcagacctacgatctgtgttagctgacaagcttcagacagagaaa
tatgacttgcagagcaaacatgatttcagtccaggacatgaaggaatgcgaaatgaggct
ttattgcaagaaatgagccagataaggattaaacatcaagaggagctgacagagctacac
aagaaacgtggggagttggcccaaactgtgattgacctgaataaccaaatgcttcaaaaa
gataaggagatccaggcaaacgaagcaaaaattgcagagtattcacaaacaatcgctgat
ctgaagaaagaatgtcaggaactgtatagtaagctgcaggacctggagcgagccaaccag
actctgaaagatgaatatgatgctttgcaaattaccttcaatgccctagaggaaaaacta
aggaagacaactgaagataatcaggaattagtctcccgctggatggcagaaaaggctcaa
gaagctaatcgtctcaatgctgaaaatgaaaaagactcaaagaggcagcaagcccggcta
cagaaagagcttgcagaagctgcgaaggaaccattgtccttagagcaggatgatgatata
gaagtactagaggaagcacatgacccagctagggagacatctccagttcgagcaatcagc
aggacatccagtaagcgactctcgcagccagctggaagtcttctggactctatcactaat
atctttggtgtttgtgaatctccctctttgggacatcattctgctgatgctgtcaggcgg
cgttctttatctacatttccatctgctgcagacaatatagagacgctcccagctggaaga
acggaggtgcgagtgcccaacacagcactgtacgtctttgatgctcatgatggagaagtc
aatgctgtacgattcagtcctggctcacgattactagccacaggaggaatggatcggagg
gtgaaactctgggaagtgattggagataagtgtgagatcaagggtgcactctctggtagt
aatgcaggcattacaagcattgaatttgacagtgctggctcctatctcttagcagcatcc
aatgactttgccagtagaatttggacagtggatgactaccgactccggcacactttgaca
ggtcatagtgggaaagtcttatctgccaagtttctgttggacaatgcacgaatagtctct
ggaagttatgaccgaactctcaaactctgggacttgcgcagtaaagtctgtataaagact
gtgtttacaggatccagttgtaatgacattgtttgtacagagcaatgtgtgatgagtggg
cactttgataagaaaattcgtttctgggatataaggacggagagtatagtgcgagaactg
gagctacaaggacggatcacagccttggatctgaatccagaaagaacagaactcttaagc
tgctctcgagatggcttgttgcatattattgacctgcgagtcattgcagtaagacaaaca
ttcaattcccagggcttcaagtgtggagctgactggaccagagttattttcagccctgat
ggaagttatgtgacagcaggctcggctgatgggactctctacttctggaatgtgttgact
ggaaaagtggaacggatgcttacaaagcatcagacagaacatggattgagctgttctatc
aatgctgtagcctggtcaccctctggcactcatgttgtgagtgtagacaaaggaagcaag
gctatactatggtctgaactatga
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