Geotrypetes seraphini (Gaboon caecilian): 117366937
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Entry
117366937 CDS
T09159
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SH3_2
SAM_2
Ank_3
Ank_5
SH3_9
PDZ_6
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
117366937
NCBI-ProteinID:
XP_033814888
UniProt:
A0A6P8SDS1
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All DBs
Position
9:22222349..23146402
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AA seq
1839 aa
AA seq
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MPLRPAANNHETPEQQQQQQQQQQQQQQQPPPPSSQPQPHAQRCAANGSQAESSDSLRDE
TLYDTIASSGSADKLLSPGRMEEPTASAIVIRIGIPDLQQTKCLRLNPDAPVWVSKQRIL
CTLNHSLKDVLNYGLFQPAFNGRAGKFLDEERLLREYPPTSITPVPYLEFRYKRRVYTQN
LLDDKQFAKLHTKANLKKFMDYVQMQNLEKVLKLLEKGLDPNFHDPDTGECPLTLASQLE
NSTELIKALKYGGAHLDFRTREGLTSLHKAVRCRNHVVLMTLLDLGASPDYKDSRGLTPL
YHSAMVGGDPYCCELLLHDYAKVGCVDENGWQEIHQACRYGHVQHLEHLLFYGADMRAQN
ASGNSALHICALYNQESCARVLLFRGASKEIRNYNSQTAFQVAIIAGNFELAEIIKTHKE
SDVVPFRETPSYTKRRRITSSSSLSSPRTLQRSASDNNLNAEGHPPYSPVPSLRSLPPLL
LSQSPEGAVGAGVGDSSLASTGSSRSTHSRSPSLQRVQEEREAESHTLRRSSRGKTSPCT
VDQESTPPILPTPVHRGPKRKLYSAVPGRTFIVIKSYTPQGEGEIQLNRGERVKVLSIGE
GGFWEGTVKGRTGWFPAECVEEVQMRQYDPRQETREDRTKRLFRHYTVGSYDNFTSYSDY
IIEEKTAVLQKREHEGFGFVLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLR
TGDFLIEVNGVNVVKVGHKQVVSLIRHGGNHLMMKVVSVSRKPESEDVVRKRAPPPPKRA
PSTTLTLRSKSMTAELEELASIRRRRGEKLDEILVAAEPTLRPDIVEADSRAATVKQRPT
SRRITPAEISSLFERQGMPAHSGFLTGTEKPHIPLPRGMSRTKSVGEDEKLTASLLDGKF
PRSTSMQDTVREGHGIPPPPQTAPPPPPSPYYFDTGPPPSFSPPPPPGRVYDTVRSSFKP
SLEAKLRGFPEVITAAEIYDTSRTSVPHPDRQKRARSMIILQDSSHLPVDPTDIPHPGSS
ATPPEKLKRKGRLADNPYANMGQFNVSLFAPTKPHRKKSPLVKQLQVEDAQEKSALSIAA
GFTRDPSPTRRSPRQSIMEFEQQIGIAQAEPTSSPFATAIAGVMKDRERRLDEKRKSTVF
LSVGAIEGSPPSPDLPSLQQSRSIDERLLGSRDVLLPSPVSALKPLICSSSSTFIHPLTG
KPLDPNSPLALALAARERALSSQVSSRSPTPVKSPDSDRATPLFVDIQTKEPGRGELEGL
ISPIFSPGTKGSYGPSPETMPPTASHWGTPTTLRKETEIQAEKPGREEKKLEDKKTMIIS
IVDTSQQKTAGLIMVHATSNGEEVGLEMNVEKPIAPEKPGELAQLPKAETQPSPVSKPPV
SQVSEKTLGQGSSEEEVEPYTVSLPPAQLSSSDEETREELAKIGLVPPPDEFANGVLVTK
PGTPISQLAQSTMPSIPAAVVAPSTTGGTSSGKPSDTPVAQESAADSGVEEVDTRSSSDH
HLETTSTISTVSSMSTLSSESGEPTDTYTSFADGQTFILEKPPVPPKPKLKSQLSKGPVT
FRDPLLKQSSDSELISQQHAATLASASVGRPRYLFQRRSKLWGDPVESRPSHGADDDKPT
VISELSSRLQLLNKDTRSLGEEPTGTLDPGKKSPVVAARLFSSLGELHTISQRSYGTTYT
VRPGSRYPVARRTPSPVKPATERTEPLGTVRPYALTPPTILKSSSLSIPHEPKEVRFVVR
SVSARSRSPSPSPSPTQSLHALHPPRPFIQKPVHLWNKYDVGDWLESINLVEHRDKFEDN
EIEGTHLPALTKEDFVELGVTRVGHRMNIERALKQLLES
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgtccagccgccaacaaccatgagactccggagcagcagcagcagcagcag
cagcaacagcagcagcagcagcagcagccgccgccgccgtcgtctcagccccagccacac
gcacagcgctgtgctgccaacgggagccaggcggagagctcggacagcctgcgggacgag
accctctacgacaccatcgccagctccggcagtgccgacaagctgctgtcgccgggacgc
atggaggagccgacggccagtgccattgtgatccggatcgggatcccagacctgcagcaa
acgaaatgtctcagattgaaccctgatgcccctgtctgggtctccaagcaacgcattctc
tgcacattaaatcatagcctgaaggatgttctgaactatgggctcttccagccagccttc
aatggccgagcaggaaagttcctggatgaggagcgactactaagggagtatccacccact
tctataacaccagtgccatacctagagttccggtataagaggcgggtatatactcagaat
ctgctagatgacaagcaatttgcaaaacttcacaccaaggcaaacctgaagaagtttatg
gattacgttcagatgcagaacttagagaaagtcttgaagcttctagagaaagggctggat
cccaacttccatgatcctgacacaggagaatgtcccctgacattggcttcacagttggaa
aacagcacagagctcatcaaagcgctaaagtatggaggggcccatctggacttccgcact
cgggagggtctgacttcccttcacaaggccgttcgctgcagaaaccatgtagttctaatg
actctcttggacctgggtgcctctcctgattacaaagacagtcgagggttaactcctctg
tatcacagtgccatggtgggaggtgacccttattgctgtgagcttctactccatgactat
gctaaggttggctgcgtggatgaaaatggctggcaggaaattcatcaggcatgtcgttat
ggacatgtgcagcacttggagcaccttctcttctatggagctgacatgagggcccaaaat
gcctcagggaacagcgctttgcatatctgtgcactgtacaaccaggaaagctgtgctcga
gtccttctgtttcgtggtgcaagcaaagaaattcgtaattataacagccagactgctttc
caggttgccataattgcaggaaattttgaactggctgaaatcatcaaaactcacaaagag
tccgatgttgtgccttttagagaaactccaagttacacgaaaaggaggcgaatcacaagt
tccagcagcctctcttccccccgcacactgcagcgttctgctagcgacaataacttgaat
gctgagggacaccctccttactccccagtgccctcgcttcgcagcctgcccccactgctg
ctgtcacagtcgccagagggggctgtgggggcgggagtgggggacagcagcctggcgagc
acgggcagctcccgcagcactcacagccgctccccttctctgcagcgagtgcaggaggag
agagaggccgaatcccatacgcttaggagaagcagccgtggcaagaccagtccttgcaca
gtggatcaggagtcaacccctcccatcctgcccacccccgttcaccgaggtccgaagcgg
aaactttatagcgctgtaccagggagaaccttcattgtcatcaaatcgtacacgccgcaa
ggagagggtgagatccagctgaaccgcggagaaagagtgaaagtgctgagtattggcgag
ggtggattttgggagggaacagtgaaaggacgcaccggctggtttccggcagaatgtgtt
gaggaggtgcagatgcgacagtatgacccccgacaagagacaagagaagatcgaacaaaa
cgcctcttccgacattatactgtgggttcctatgacaactttacatcttacagtgactat
atcatagaagagaagacagctgtgctgcagaagagggagcatgagggattcggttttgta
ctgcgaggggctaaagcggagaccccaattgaggagtttacaccaactccggccttccca
gcactgcagtatctggaatcggtggatgtggaaggagtggcctggagggcaggacttcgc
actggagacttcttgattgaggtaaatggtgtcaacgtggtgaaggtaggacacaagcaa
gtggtctcactgattcgacacgggggtaatcacttgatgatgaaggtggtgtctgtcagc
cgcaagccagaatctgaagatgtggtacggaaaagagctcctccgccacctaagagggca
cccagcaccaccctgacactgcgctccaagtccatgactgctgagcttgaggagctagct
tccatccggagacggagaggggagaagttggatgagatcctggtagctgctgagcctacc
ctgcgaccagacattgttgaggctgattcaagagctgcaacagtgaaacaacgaccaacc
agtcgacgcatcaccccagcagagatcagttcactgtttgagcgccagggaatgccagca
cattcaggattccttacagggactgaaaaaccccatatcccactgcccagaggaatgtcc
cgaactaaatctgtaggtgaagatgagaaacttacagcctctctgctggatggtaaattt
ccccggagcacatcaatgcaggatacagttagagaagggcatggaattccacctcctccc
cagacagctcctcctcctcctccttctccatattactttgatacaggccctcccccatcc
ttttctccacccccacccccaggaagagtttatgatactgtaagatctagctttaagcca
agtttggaggccaaactccgtggattcccagaggtcatcacagctgctgaaatttatgat
acttcaaggacttccgttcctcatccagacagacaaaaacgagcccgttctatgattatc
ctccaggactcctctcatttacctgtggatcccactgacatcccccatccagggtcttct
gctacccctccagagaagttgaaaagaaaagggcgattagctgataacccctatgccaac
atgggtcaatttaatgtgagtttgtttgcccccacaaagccccataggaaaaaaagtcct
ctggtgaagcaactgcaagtagaggatgctcaggaaaagtcagccctgtccattgcagca
ggctttaccagagacccctctcctactcgaagaagcccacgccagagtatcatggagttt
gagcagcagattggtatagctcaagctgagccaacaagcagcccctttgctactgccatt
gctggagtcatgaaggacagagagcgtcgtcttgatgagaaacggaaatccactgtcttc
ctatcagtaggggccattgaaggaagccccccaagccctgacttgccttctctacagcag
tcaaggtctattgatgaacgattattaggaagccgagatgtcctactgccctctcctgtc
tcagctttaaagccattgatctgcagctcatcatcaacttttattcaccctcttacagga
aaacccttggatcccaactctccactggcacttgcgctggccgcaagagagagagccctg
tctagtcaagtttcgtcaagatcaccaacaccagtcaagagccctgattcagacagagca
acacctctgtttgtggacatccaaaccaaagaaccagggagaggtgaattagagggttta
atttcacccattttttcacctggaactaaaggaagctatggtccatctccagaaacaatg
ccccctacagcaagccactggggaacccctacaacattgaggaaagaaactgaaattcaa
gcagaaaaacctggaagggaagagaaaaaacttgaagacaagaaaactatgataatcagc
atagtggacacatcccagcagaagacagcaggactcatcatggtccatgcaacaagtaat
ggtgaagaagtaggacttgagatgaatgtggagaaaccaatagctccagagaaacctgga
gaactagcacagctgcccaaagctgagacccagccaagtcctgtgagtaaacctccagtt
agccaagtttctgaaaagacacttgggcaggggagttcagaggaggaagtagagccctat
acagtttctctaccaccagctcagctgtcttcaagtgatgaggagactagggaggaacta
gccaagattgggctggtacctccaccagatgagtttgcgaatggagtactggtcaccaaa
cctggcacaccaatcagccaattggctcagtccaccatgccatccataccagcggcagta
gtagcaccttctaccactggtggaacatcctcagggaagccatctgatacccccgtagcc
caagagtctgctgcagactcaggagtggaggaagtggacaccagaagttcaagtgatcat
cacctggagactacaagtaccatatccacagtctccagtatgtccacattgtcttcagaa
agtggagagcccactgatacttacacttcatttgcagatggacaaacttttatactcgag
aagccaccagtgcctccaaagccaaaacttaagtcccagctcagcaaggggccagttact
ttcagggacccacttttgaagcagtcttcggacagcgagctcatctcccagcaacatgca
gccactctggcctctgccagtgttggtcgcccacgctacctctttcagagaaggtccaag
ctatggggggaccccgtggagagtagaccatctcatggggctgatgacgacaagccaact
gtgatcagtgaactcagctctcggctacagcttctaaataaagatacaaggtcattgggg
gaagagcccacaggaacattagatcctggaaagaagtcacctgttgttgcagcacgactt
ttcagtagtttaggtgaactccacaccatttcccagcggagctatggaaccacctacaca
gtacgacctggaagccggtaccctgtggcccggcgtactcccagccctgtaaaacctgcc
actgaaaggacagaacctcttggcactgttcgtccatatgctctgactccacctaccatt
ctcaaatcttccagcctctccattccacatgaacccaaggaagtccgctttgtagtgcgt
agcgtgagtgcccgaagccgttccccatcaccatctccttcacctacacaatcactgcac
gcactacaccctccacggcctttcatccaaaaacccgttcatctttggaacaagtatgat
gtgggagactggctggaaagtatcaacctcgttgaacaccgggataaatttgaagacaat
gaaattgaaggcacccatctccctgccctaaccaaggaggactttgtggagctaggggta
actcgagttgggcaccgaatgaacattgaacgagctctcaaacagctgctagaaagctga
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integrated database retrieval system
