Geotrypetes seraphini (Gaboon caecilian): 117366940
Help
Entry
117366940 CDS
T09159
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117366940 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsh04040
]
117366940 (CNGA1)
Ion channels [BR:
gsh04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117366940 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
Presenilin
CDC45
SLC12
PFF1_TM
NPR3
MDM10
Motif
Other DBs
NCBI-GeneID:
117366940
NCBI-ProteinID:
XP_033814898
UniProt:
A0A6P8SDS5
LinkDB
All DBs
Position
1:216046306..216070017
Genome browser
AA seq
625 aa
AA seq
DB search
MDQYLPGALAVHNVNNSSNKDDEKEEEEKKRKRKEKRGKSDHKKEKIKDKQKKKDKKDPD
KDKNEEKIKAKEKKKSGEKNKKEEKKKDIFVIDPAGNLYYNWLFCITVPVMYNWTMIIAR
ACFDDLQQDYIKTWFVFDYISDIIYIADMYVRTRTGYLEQGLLVKEETKLREKYMKSLQF
KLDIMSVIPTDIMYLQLGLNYPELRLNKLLRVSRMFEFFQRTETRTNYPNVFRISNLVMY
IVIIIHWNACVYYSISKAIGFGTDTWVYPNISHPEFSRLARKYVYSLYWSTLTLTTIGET
PPPVEDSEYFFVVADFLVGVLIFATIVGNVGSMISNMNAARAQFQGRIDAIKQYMHFRKV
SKDLEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAG
LLIELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGE
ISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKAMLEEKGKQILMKD
GLLDLDITNAGSDPKDMEEKVVKMEGLVDNLQTKFARLLAEYDSAQQKLKQRITKLEKIL
KPSTGIEFTDLAEIDASKDDARPPT
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtatctacctggtgccttggcagttcacaatgttaacaacagcagtaataaa
gatgatgaaaaggaggaagaagagaaaaagagaaagagaaaagagaaaaggggcaagtct
gaccacaaaaaggaaaagataaaggacaagcaaaagaaaaaggacaaaaaggatccagat
aaagataagaacgaggagaaaatcaaggcaaaagaaaagaaaaaaagcggtgaaaaaaat
aagaaagaggagaagaagaaagatatttttgtcattgatccagcagggaacctgtattat
aactggctgttttgtatcactgtgcctgtcatgtacaactggactatgatcatagcaagg
gcctgctttgatgaccttcagcaagactacataaaaacgtggtttgtttttgattacata
tcagacataatttatattgctgatatgtatgtacgtacaaggacaggttatctggagcaa
ggtttgctggtcaaagaggaaactaaacttagagagaaatatatgaaatctctgcaattt
aagctagatatcatgtctgtcataccaactgatataatgtaccttcaactaggactgaac
tatccagaattaaggctaaacaaattactcagagtatctcggatgtttgagttctttcag
cgcacagagacaaggacaaactacccaaatgtttttagaatctctaaccttgtcatgtac
attgtgattatcattcattggaatgcttgtgtgtactattcaatttcaaaagccattggt
tttgggacagacacatgggtttatcccaatatctcccatcctgaattttcccggttggca
agaaaatatgtgtatagtctttactggtcaacattgaccttgactacgattggtgaaacc
cctccacctgtggaagattctgagtacttctttgtagttgctgacttcttggttggagta
ctgatttttgctaccattgttggtaacgttggttccatgatctcaaacatgaatgcagca
cgggctcaatttcagggaagaattgatgctatcaagcagtatatgcactttcgaaaagta
agcaaagacttagaaaaaagagtcattaagtggtttgactacttgtggacaaacaaaaag
gcagttgatgaaagggaagtcttgaagtatcttccagacaagctaagggcagaaattgct
atcaacgttcacttagatacattaaagaaagttcgaatttttgcagactgtgaagctgga
ctcttgattgagctagtcttgaaattgcagccacaagtttacagcccaggagattatatc
tgccgcaaaggtgacattgggcgagaaatgtacattattaaagaaggaaaacttgctgtg
gtggccgatgatggaattacacaatttgtggttctaagtgatggcagttactttggagaa
ataagtattcttaacattaaagggagcaaagcaggtaatcgaaggactgccaatattaaa
agcattggttattcagatctcttttgtctatctaaagatgatcttatggaagcattgact
gagtatccagatgccaaggcaatgctggaggaaaaaggtaagcaaatcttgatgaaggat
ggactactggatttagatattacaaatgctggcagtgatccaaaagatatggaggaaaag
gttgttaaaatggaaggactagttgacaacttacaaacaaaatttgccagacttctagct
gagtatgattcagcacagcagaaactgaagcagcgaataacaaaacttgagaaaatactg
aaaccaagcacaggaattgaattcacagatttagcagaaattgatgcaagtaaagatgat
gctagaccacctacataa
DBGET
integrated database retrieval system
