Geotrypetes seraphini (Gaboon caecilian): 117366946
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Entry
117366946 CDS
T09159
Symbol
OPTN
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04137
Mitophagy - animal
gsh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117366946 (OPTN)
04137 Mitophagy - animal
117366946 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117366946 (OPTN)
Membrane trafficking [BR:
gsh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117366946 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117366946 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
117366946 (OPTN)
Xenophagy
Cargo receptors
117366946 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
T7SS_ESX_EspC
Motif
Other DBs
NCBI-GeneID:
117366946
NCBI-ProteinID:
XP_033814913
UniProt:
A0A6P8S9K2
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All DBs
Position
9:complement(5369683..5411912)
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AA seq
567 aa
AA seq
DB search
MATSSHLTARPAENGKCDVSEMRNGPPSLTHPTLGVITPENMLQQMNELILENNELKEAM
KQHNQAMKGCYEELSVWREKQMEERELFESKFREAQQRLCEMSGENEHLKRDLQDLKEKG
EEAGQGSGDSAASPRKETHEELEHLKAQVVRLQAEKADLLTIISELQLKVNLGSSEDSFV
EIRMAEGEETSTSTASKDNAGQSELVSYVKSTGETKKYLESEEMTVSRLLQSLREESARA
EMLERDLSSTRHRLAEAEQKAATVSEQGTQTEEEEREDSTVADFVSEVESLKLQIKSLCK
ELQEAHLKLNDAELLKKRLQDKCQSLDQKLSENEIDQEEKQELKYTVKKLELQVESMREE
IKLEQSKTESEASEVTRLQDAFDKLSAEHTEAWKIAEELRKEESERMKMVTNELSDKLER
AERALAAKQLEIDDLKVACTSQQEDMETVNLLRTQMDIYCSDFHAEREAREKIHGEKEQL
AVQLEFMIQENSRLKQELEMELRESIVAMQSRHGPTGPREQDHPRLFQRGAESVEQQLAI
PKHSCPKCGKIMPDLDTLQIHVLDCIT
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggctacatcgagccacctgacggccagacctgccgagaatggtaaatgcgatgtcagt
gagatgagaaatggaccccctagtctgactcatcccacacttggggtgattacaccagaa
aacatgttacagcagatgaatgaactcattttggagaacaatgagttaaaagaagcgatg
aaacagcataaccaggccatgaaaggctgttatgaggagctctctgtgtggcgtgagaag
cagatggaagagcgggagctttttgagtccaaattcagagaggcccagcagcgcttgtgt
gagatgagcggtgaaaatgagcacctgaagagagaccttcaggacctgaaagagaaaggg
gaggaagctggacaggggtctggagacagtgcagcgagtccccggaaggaaactcatgag
gaactggagcatctaaaagctcaagtggtacggcttcaggcagagaaggccgacctgctg
accatcatttcggagcttcaactcaaagtcaaccttggctcctctgaagactcttttgtt
gagatcagaatggctgagggagaagagaccagcacttcgacagcaagcaaggataatgct
ggccagagtgaactggtgtcatatgttaaatccacaggtgaaaccaagaagtacttggaa
tcggaggaaatgactgttagccgacttctacagagtctgagagaagagagcgccagggca
gagatgctggagagagatctgagctccaccaggcacaggttagctgaggcagagcagaag
gcagccactgtatcggagcaggggactcagaccgaagaggaggaacgagaggacagcacg
gtggctgattttgtgagtgaggtggagagtctgaaacttcagatcaagtctctgtgtaag
gagctccaggaggcccacctgaaactgaatgacgccgagctgctgaagaagagactccag
gacaagtgccagagccttgaccaaaaactctctgaaaatgaaattgaccaagaagagaag
caggagctgaagtacacggtgaagaagttggagctgcaggtggagagcatgagagaagaa
ataaaactggagcaaagcaaaacagaatcagaggcgtcagaagtcaccagactgcaggac
gcatttgacaagctcagcgctgagcacacagaagcctggaaaattgctgaagaactgaga
aaggaggagtcagagagaatgaaaatggtgacgaatgaactcagtgataagctggagaga
gcagagagagctttagctgcaaaacagctggaaatagatgatttgaaggtagcctgtacc
agccagcaagaggatatggaaaccgtcaacctcctgcggacgcagatggacatttattgt
tcagacttccatgcggaacgagaagctcgggagaagattcacggggagaaggagcagctg
gctgtgcagctggaattcatgatacaagagaacagcagactgaaacaagagctggaaatg
gaactgagagagtccatagtagcaatgcagtcacggcacggcccgacaggaccacgggag
caggatcatccccgtctttttcaaagaggagccgagagcgtagagcagcagttggccatc
ccaaagcactcctgtcccaagtgtggcaagatcatgccagatttggacacgctacagatt
cacgtcttggactgtattacttaa
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