Geotrypetes seraphini (Gaboon caecilian): 117366996
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Entry
117366996 CDS
T09159
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117366996 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117366996 (HERC3)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117366996 (HERC3)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
HECT type E3
117366996 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
117366996
NCBI-ProteinID:
XP_033815028
UniProt:
A0A6P8S9A5
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All DBs
Position
1:complement(336090548..336224715)
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AA seq
1064 aa
AA seq
DB search
MFCWGHSAFGQLGLGRDFLTAVTEPQACRFFEERLVKEVACGRNHSAFLLEDGELYTCGL
NSKWQLGHDQEGLEPVLVEALSEEHIVHVACGESHSLALNDKGQLFSWGIENGQLGLTTT
EDSIAVPRLIKKLNRQRVLQVSCGSWHSLALSKDGQLFSWGQNKHGQLGLGKGFGSQASP
QHVTSLEGIPLAQVAAGGAHSFALSLSGAVFGWGQNNAGQLGLGDEEDRASPCHVKHLRS
QKAVYISCGEEHTAVLTKSGGVFTFGAGACGQLGHNSFQDEVNPRRVLELMGSEVSQIAC
GRQHTVAFVPSSGVIYAFGCGTRGQLGTGHTENMKCPVLVKGCWAAHLGQISAAAAGSFV
HHMVKRIFSGGDQTFVLCTKYENPLPADDFRSINLANYTNLINNDTLELWQRKVLEHSHS
NSINVVLQSLASSACWNGSFLEKKDDEHFQTSPKIPGISLGSIRLLFEKLMNSEHARLLE
QVLKSFESFVIPQLSNCPPDVEAMRIYLILPEFPLLQDSKYYITLTLPLAMAILRLDANP
SKVLDNWWSQLCPSYFFKLVDLYKGAVVYLLSGRKTLLIPVLFTSYITAALRLLEKLYKV
NVKIKHVEYYKFYIPEISNLVNIEEDYILWVISKSREQFGSSVTQDSLTFCSYPFIFDAQ
AKTKMLQTDAELQMQVAINEANLQNIFMLLTLEPLLARNPFLVLHVRRNNLVGDALRELS
IHSDVDLKKPLKVIFDGEEAVDDGGVTKEFFLLLLKELLNPIYGMFSCYSDSNLLWFSDA
CVVEHNWFHLVGIVCGLAIYNFTVVDLHFPLALYKKLLNVTPDLEDLKELSPTEGRYSPQ
VEISYFSNLWGLQQLLDYPGEDLEDTFCLSFTICRENFGVTEMKTLVPGGDQITVTKENR
QEFVEAYVNYVFNLSVHEWYEAFSEGFLKVCGGKMLELFQPSELQAMVIGNCNYNWQELE
ESSAYKGDYSAEHPTVKMFWETFHGFPLEKKKKFLLFLTGSDRIPIYGMRSLRLIIQSTA
GGEQHLPVAHTCYNLLDLPKYSSKETLEVRLTQAIDHYEGFSLA
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgttctgctggggccattctgcttttggccagctaggattaggacgtgactttcttacg
gctgtgacagagccgcaggcatgcaggttctttgaagagagactggtcaaggaggtggcc
tgcggaaggaatcattctgccttccttctggaagatggggagctttacacgtgtggccta
aacagcaagtggcaacttggtcatgatcaagaaggactggaaccagtgctggtggaagcc
ttgtcagaggagcacattgtacatgtggcctgtggagaatctcacagcctggcactcaac
gacaagggacagctcttttcctggggcattgaaaatggacaacttggcctgactaccaca
gaagattctattgcagtgccaaggttaataaagaaactgaatcggcagagagtcctccag
gtttcctgtggtagttggcactctttggctctttcaaaggatgggcagctgttctcctgg
ggtcagaacaagcatggacagctgggcctgggtaaaggattcggctcccaggccagccca
cagcatgtgacatccctggaggggatccccctggctcaggttgctgcaggaggggcacac
agctttgctctgtctctgtcaggagccgtgtttggatggggccagaataacgcaggccag
ctgggacttggcgatgaagaagatagagcatctccatgccacgtgaaacacttgcgcagt
cagaaggctgtatatatcagctgtggagaagagcacactgccgtcctaactaaaagcgga
ggtgtcttcacctttggggctggtgcttgtggtcagctgggccacaattcattccaggat
gaggttaatcccagaagggttctggagctgatgggcagtgaagtctcccaaattgcctgt
ggcagacagcatacggtagcctttgtgccttcctcgggagtgatctatgcctttggctgt
ggcactagaggccagctcggcactgggcacactgagaacatgaaatgccctgtactggta
aagggctgctgggcagcacatcttggacagatctcagcagcagctgcaggctcatttgtc
catcacatggttaaacggatcttctctggtggagaccaaacgtttgtgctttgtactaaa
tatgagaatcctttaccagcagatgacttccgatccattaacttggcaaattacaccaat
ttaataaacaatgacacactggagctttggcagcggaaagtgttagaacatagtcactca
aattcaatcaatgttgttctccagtcgctggcctcctctgcttgttggaatgggagtttt
ctggagaagaaggatgatgaacatttccagacaagtccaaagattccagggatcagtctg
ggctctatcaggctgctgtttgagaagttgatgaactctgagcatgccaggctgctggag
caggttttaaagagcttcgaaagctttgtgattccccagttgtccaactgtcctccagat
gttgaggcaatgcggatttacctgatccttcctgaatttcctctgcttcaagactccaag
tactacatcacattaaccctgcctttggctatggccatactgcggcttgatgccaaccct
agcaaagtgttagataactggtggtcccagttgtgccccagttacttctttaaactggta
gatctgtacaagggggctgtggtgtacctcctgagcggaagaaagacccttctgatccct
gtgctttttaccagctatatcacagctgcgctcaggctgctggagaaattgtacaaggta
aatgtgaagattaaacatgtggaatattacaagttttatatccctgagatttccaatttg
gtgaatattgaagaggactatatcctgtgggtcatcagcaagtccagagagcaatttgga
tcttcagttacgcaggactcactgacattctgttcttaccctttcatatttgatgctcaa
gccaagactaaaatgctgcagactgatgcagaactgcagatgcaggtcgctatcaatgaa
gctaacctgcagaacatcttcatgctgctcactctggaacccctgctggcccggaaccca
ttcttggttcttcatgtccgtagaaataaccttgtgggggatgccttgcgagagctgagc
attcattctgatgttgacctaaagaaacctctaaaggtgatatttgatggtgaggaggct
gtggatgatggaggagtcacaaaagagttcttcctcttgttgctgaaggaacttctgaac
cccatctatggcatgttttcctgctactcggattctaacctactttggttttctgatgcg
tgtgtcgtagagcacaactggtttcacctagttggaatagtctgtggtttagcaatctac
aacttcacagtggtggacctccattttcccttggcactctacaagaagcttctgaatgtt
actcctgacttggaagacctgaaggagctgtctcctacagaaggacggtacagcccgcaa
gttgaaatttcatacttttctaatctatggggtcttcagcagcttttggattatcctggt
gaagatttggaagacaccttctgcctcagtttcacaatctgcagagagaattttggtgtg
acagaaatgaagacattagttcctggaggagaccaaataacagtcactaaggagaacagg
caggagtttgtggaagcttatgtgaattatgtcttcaatctgtcggtccatgagtggtat
gaggctttctctgaaggtttcctgaaggtgtgcggggggaaaatgctggaactcttccag
ccatctgagctacaagccatggtgatagggaactgcaattacaactggcaggagctggag
gagagttcagcctacaaaggagactactcagctgagcaccccacagtgaaaatgttctgg
gaaacctttcatggattccccctagagaaaaagaagaaatttcttttattcttgactggg
agcgaccgtattcctatttatggtatgcgcagtttgcgtctcatcatccagtccacagcg
ggtggggagcagcacctacctgtggcacatacctgctataacttgctggacctccccaag
tatagcagtaaagagacgctggaagtccgactcactcaggccatcgatcactacgagggc
ttcagcttagcctga
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