Geotrypetes seraphini (Gaboon caecilian): 117367134
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Entry
117367134 CDS
T09159
Symbol
PUS7L
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsh03016
]
117367134 (PUS7L)
Enzymes [BR:
gsh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
117367134 (PUS7L)
Transfer RNA biogenesis [BR:
gsh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117367134 (PUS7L)
Prokaryotic type
117367134 (PUS7L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
R3H
CUE
SIX1_SD
Motif
Other DBs
NCBI-GeneID:
117367134
NCBI-ProteinID:
XP_033815315
UniProt:
A0A6P8SB13
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Position
9:complement(64223212..64312814)
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AA seq
707 aa
AA seq
DB search
MEGVVHDSSSIHSLAYLDDHVGFCGTIKSSPSDFVVTEIDMSGQLVRESVINSFFKFGEL
PEKQNSSCQYKKQKIVPQESYLEKRHFLNFREFVNRTDPPEQDMAVDTNTMEEVDDEYGP
EKTDNLSSLLEEPLLESLTAFACSIKSELSSEMQSATPPLEFSLGSFPDKDQRARFHSAI
QQTYPFLLTATRSTEIIVKPNLDYRELCQLVSEEEAENFLKYLDSKQVNSTFTFKPDLSK
EHRKAVHHFISKKFGKLVETKSFSKEDHQGQQNTVITARFREKSGSLKKRRRADCQDVSD
IYTAFTLRKENLETLEAISCLSSELGVLPSDFSYAGVKDKKAITYQTVVVKKVTPMRLKE
VESRIQKKGMTMYNIRSVQQHLRLGQLKGNQFDIIVRDLKTQHGDSEATIEKIIFQATEN
VKKNGFVNYYGPQRFGRGKHVQSNQIGLALLKEDMVKAVKLLFTPEEEDNPVNRAKRYFL
QTEDAKITLALMPECKVRERMVLRALNRYSISPEGCTRAWFSIPHSMRIFYVHAHCSKVW
NEAASYRLKTYGSQVVEGDLVIRETDDVETTSLTDRVHVVTALEEASKAYALHQVVLPMI
GHSVTYPGNKVGEWYHEMLGRDGLQACTFRNSVLQLNVPGCYRHILKYPRNLLYEVIEEL
DDGVESKEDTKEWNAALSSKQSLKISFELDSSCYATVCLREIMKYDC
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggttgttcacgattcaagcagtattcattctcttgcctatcttgatgatcac
gtaggcttttgtggtactataaaaagtagcccaagtgactttgtggtaacagaaattgat
atgtctggacagttggtcagagaaagtgttattaactcctttttcaaattcggtgaatta
cctgagaaacaaaatagctcttgtcagtacaagaagcagaagatagttcctcaggagtct
tatttagaaaagagacattttctgaatttcagagaatttgtcaatagaacagaccctcca
gagcaggatatggctgttgatacaaacactatggaagaagttgatgatgagtatgggcct
gaaaaaactgacaatctgagctctttgttagaagaacctctgttggaatcattaactgca
tttgcttgttccataaaaagtgagttgagttctgaaatgcaatctgccactcctccactt
gaattttcactgggatcgtttccagataaagaccagagggctagattccacagtgccatc
caacagacttacccctttcttctcactgctactcggagcacagaaatcattgttaaacca
aaccttgattacagagagctttgccaattagtgtctgaagaagaagcagaaaactttctg
aaatacttggattcaaaacaagtgaactcaacatttacttttaaaccagatcttagcaaa
gagcacaggaaagctgtccatcactttataagtaagaaatttggaaaactcgtggaaaca
aagtctttctccaaggaagaccatcaaggtcaacaaaatacagtaattacggcaaggttt
cgagagaaaagtggttcactcaagaaaaggcgtagagctgattgtcaagatgtgtcagac
atatacacagcttttacgctacgaaaggaaaatctggaaactttagaagccattagctgc
ttatcctcggaacttggtgtgcttccttcagatttcagttatgcgggtgttaaagacaaa
aaggccattacatatcaaactgtggttgtcaagaaagtgaccccaatgaggctgaaagag
gtagaaagcagaattcagaagaaaggaatgacaatgtacaacatccggtctgtgcagcag
caccttcgactgggtcagctgaaaggaaaccagtttgatataattgtgagagatctgaaa
acccagcatggagactcagaagcaactattgaaaaaataatttttcaggcaactgagaat
gttaagaaaaatgggtttgtaaattattatgggccccagcgatttggccgaggaaagcat
gttcagtcaaatcaaattggattggctttgctgaaggaagatatggtgaaggctgttaag
ttactgttcacaccagaggaagaagacaatcctgtaaatcgggcaaagagatattttctt
caaactgaggatgcaaaaataaccctggcattaatgcctgaatgtaaagtgcgagagaga
atggtgctgcgagcactgaaccgttacagtatcagtcctgaagggtgcacgcgtgcttgg
ttcagcattccccattctatgcgtatcttctatgttcacgcgcactgcagcaaggtctgg
aatgaggctgcatcttacaggctgaagacatatggttcacaggtggtggagggggacctg
gtcatccgtgaaactgatgatgttgaaacaacttctcttactgacagagttcatgtcgtg
acagctttagaagaggcatctaaagcatatgcacttcaccaagtggtacttcccatgatt
gggcacagtgtaacatacccaggcaataaagttggagaatggtaccatgaaatgcttggt
agagatgggctacaggcatgcacattcagaaattctgttctacagctgaatgtaccagga
tgttacagacatattctaaagtatccacggaacttgttgtatgaggttatagaggaactt
gatgatggtgtggagagtaaggaagacacaaaggaatggaatgctgctttgtcgtcaaaa
caatcccttaaaatatcctttgaactggattcttcatgttatgcaacagtttgtctcaga
gaaatcatgaaatatgactgttag
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