Geotrypetes seraphini (Gaboon caecilian): 117367180
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Entry
117367180 CDS
T09159
Symbol
GIGYF2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117367180 (GIGYF2)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117367180 (GIGYF2)
Surveillance factors
Other surveillance factors
117367180 (GIGYF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
117367180
NCBI-ProteinID:
XP_033815425
UniProt:
A0A6P8SJC2
LinkDB
All DBs
Position
9:122791467..123465564
Genome browser
AA seq
1292 aa
AA seq
DB search
MAAETQTLNFGPEWLRALSSGGSVMSPPPSPALPKYKLADYRYGREEMLALYLKDNKIPS
DLQDKEFLPILQEEPLLPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGTVVGAPRGRS
SSRGRGRGRGEGSFYQRSFDEVDGGFGRGTREMHRSQSWEERGDRRFEKPGRKEPVRPTF
EEGGTAITGRKHEFTRSESENWRILREELNGEDEEGGVWRLAGSRRDGERWRPHSPDGLR
APGWREHAERRRRFDFDFRERDDERGYRRVRSGSNSAEEDKDILPEWCLEDAEEEMGTFD
SSGAFLPSKKVQKEPIPEEQELDFRPSEEEEHSDSEGSHNEEAKEPDKLVKKEAERTEWA
TAEQTLSVIEEVRTSSPAHCSGSPPEPQLQELALCSPSNEREQRSPEPTEKPEVQKENAL
ENTLPPKAPSKVEEVIPAASSLMSQRPPDATAASTPLPPCSSPIFTHDPSPQLLPTPVTA
APGMGNIPIELDDDEGLKHLEQQAEKMVAYLQDSALDDERLAAKIREHRAKVVSMPLSHE
ILQKWFYKDPQGEIQGPFNNQEMTEWFQAGYFTMSLLVKRACDESFQPLGDIIKMWGRMP
FTPGPAPPPLLGDLDQERLSRQQKITALYQLQHLQYQQFLIQQQYAQVLAQQQKSVLSSQ
EQQQLALLLQQFQTLKMRISEQNTVPPVTRSMSVPDTGSIWELQTTTSQPAVWEGSSVWD
LPVDTASQSSALGQLQQLEKAKAAKLEHERREVEMRVKREEEERKRQEELRRQQEELLRR
QQEEEERKRHEEEELARRKQEEALRRQREQELALRLQREEEERKQQEEALRRLEERRRED
EERHQREELLRKQEEEAAKWAREEEEAAQRLMEENRIRTEEETARLRQEEEDRKRKELEL
QRQKELLRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQANSAGCSSQATLSLTEI
QKLEEEREQQLQEERRQQRELMKALHQQQLQQQQQQKLSSWGNVSKSAGITKSLLEIQQE
EARQMQKHQQQNRARGTTIPVTTCTTTPSNLHSSIGNSVWGAINASNTSQWTPDVVSSIW
SSVDSKNSNMGFWDDAVKDVGPRNSANKNKNNANLSKPTGVSSRQNKKVEEEEKVLKLFQ
GVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYLGDTPEAKE
FAKQFLERRAKQKATQQRQQDSLWGMSHSALQSVFQNNHSNSQQSNFETAQSVSKKKKKQ
KMVRADPSLLGFSVNASSERLNMGEIETLDDY
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgaaactcaaactcttaactttgggcctgaatggctgcgagctttatctagt
ggtgggagtgtgatgtcaccacctccctcaccagctttgccaaagtataaactagccgat
tatcgttatgggagagaagaaatgttagcactttatctaaaggataataagattccttct
gatcttcaggataaggagtttctacctattttacaagaggagcccctgctaccactggca
cttgtaccttttacagaggaagaacagagaaatttctcgatgtctgtaaacagtgccgct
gtcctgcgattaacaggacgaggaggaggaacggtggtgggggctcctcgaggtcgaagt
tcctctagaggtcgaggtcgaggccgaggagaaggcagtttctaccaaagaagttttgat
gaggtagatggtggttttggccgtgggacccgagaaatgcacagatcacagagctgggaa
gaaaggggagatagacggtttgaaaaaccagggcgaaaagaaccagtgagaccaaccttt
gaagaaggtgggacagcgattacagggaggaaacatgagttcacacgctctgagagtgag
aactggcgaatcctgagagaagagctgaatggggaagacgaagagggaggtgtatggcgg
ctagctggatctcgacgggatggtgagagatggcgtcctcatagtccagatgggcttcgt
gcaccaggttggcgggagcatgcagaacggcgaagacggtttgattttgactttcgagaa
cgagatgatgaaaggggatatcggagagtcaggtcaggcagtaacagtgcggaggaagat
aaagacatccttcctgaatggtgcttggaggacgcagaagaagagatgggaacgtttgat
tcctccggggctttccttccctctaaaaaagtacagaaggagccaatccctgaggaacag
gaactagattttcggccttcagaagaagaagagcactcagattcagaaggtagccacaat
gaagaagccaaagaacctgataagttagtaaagaaggaagctgagaggacagaatgggct
actgcagagcaaacgttgtctgtaatagaagaagtcaggacttcatcaccagcccattgc
tcaggcagtcctccagaaccccagctacaagagctggccctgtgcagcccatctaatgag
agagaacagagatctccagaaccaacagaaaaaccagaggtacagaaagagaatgcatta
gagaatacgctaccacccaaagcgcctagcaaggtggaagaagtgatacctgctgcttct
tcactcatgtcacagagaccaccagatgcaactgctgcttctactccacttcctccttgc
tcttctcctattttcactcatgaccctagcccccagttattaccaacaccagttactgcg
gctcctggaatggggaacattcccattgagcttgatgatgatgagggactaaagcacctg
gagcagcaagctgaaaaaatggtagcatatctgcaggacagtgcactagatgatgaaaga
ctggcagcaaaaatccgagagcacagagcaaaagtagtctctatgcctctgtcgcatgaa
atattgcagaaatggttctacaaggatccccaaggtgaaattcaaggtcccttcaataac
caggagatgacagagtggtttcaagctgggtactttactatgtccttgctagtgaagaga
gcctgtgatgagagctttcagcccctgggagatatcataaagatgtggggaagaatgccc
tttacaccgggcccagcaccgccacctctcttaggtgatctggatcaagaacgcctcagc
cgccagcagaaaataacagccttgtaccaactgcagcatctccagtaccaacagtttttg
atacaacagcagtatgcccaggtcctggcccagcagcagaaatcagtgctctcctcccag
gagcaacagcagctagcactcctcctccagcaattccagactttgaaaatgagaatatct
gaacagaacactgttccacctgtaacgaggtctatgtcagtgccggacactggctcaata
tgggagcttcagacaacaacctcccaacctgcagtgtgggaaggcagcagtgtttgggat
cttcctgttgatactgcttctcagagttcagctcttggccagcttcagcagcttgaaaag
gccaaggcagcaaagttggaacatgagaggagagaagtagaaatgagggtcaagcgggag
gaggaggagcggaaacgtcaggaggagctacgtagacaacaagaggagcttctaaggcga
cagcaggaagaggaggagaggaagcgtcatgaagaagaagaactggcacgacggaaacag
gaagaagccctaagacgccagagagaacaagaacttgcgttacgactacaacgagaggaa
gaggaacggaaacagcaagaagaagcacttaggcgattagaggagaggaggagagaagat
gaggaaagacatcagcgagaagagctgcttagaaaacaggaagaggaagctgctaaatgg
gcccgagaggaagaggaagcagctcaacggttgatggaagaaaataggatacgcactgaa
gaggaaacagcgagattgcggcaggaggaggaggaccgaaagcgaaaagagctggaactg
cagcgacaaaaggaattattgagacaaagacaacagcagcaagaggcactaaggaggtta
caacaacagcagcaacaacaacaacttgcacagatgaagcttccttcatcatcaacgtgg
ggacaacaggccaactccgcaggatgttcatcccaagctacactgtcactgacagaaata
cagaagctggaggaagaacgagagcaacagcttcaggaggagagacgacagcaacgagaa
ttgatgaaggctttgcaccaacagcaactgcagcagcaacaacaacaaaagctttcaagc
tgggggaatgtgtccaagtcagcaggtattaccaaatccctgttagagatccaacaagag
gaggctaggcagatgcaaaaacaccagcagcagaatcgagcccgtggcacaaccattcct
gtcactacctgtaccaccacgccctcaaacctacacagcagcattgggaattcagtttgg
ggagccataaatgctagtaacacaagccagtggacgccagatgttgtcagcagcatatgg
agcagtgttgacagcaagaattctaacatgggattctgggatgatgcagtgaaagatgtg
ggtcctcgaaactctgcaaacaaaaataagaacaatgccaacctcagtaagccaacaggt
gtcagcagcaggcaaaataagaaggtagaagaggaggaaaaggtgctgaaactgttccag
ggtgtgaataaggcgcaggatggattcactcagtggtgtgaacagatgttgcatgcacta
aacacagccaacaacttggatgttcccacgtttgtctcttttctgaaggaagtggaatca
ccttacgaagtccatgactatatccgagcataccttggagacaccccagaagccaaggaa
tttgccaagcagttcttagagcgtcgtgccaaacagaaagctacccaacagcgacagcag
gattctttgtggggaatgagccacagtgcactgcagtcagtctttcagaacaatcatagc
aacagtcagcagtccaactttgaaactgcacagagtgtcagcaagaagaaaaagaagcag
aagatggtgcgggcagatcccagcttattaggattttcggtgaatgcatcctcagaacgg
cttaacatgggagaaattgagacattggatgattactga
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integrated database retrieval system
